Clone MIP23775 Report

Search the DGRC for MIP23775

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:237
Well:75
Vector:pOT2
Associated Gene/TranscriptCG9125-RA
Protein status:MIP23775.pep: gold
Sequenced Size:1298

Clone Sequence Records

MIP23775.complete Sequence

1298 bp assembled on 2010-08-03

GenBank Submission: BT125074.1

> MIP23775.complete
ATAATTATAGTTTGAACTTGGAAAATCCGCGGAGGCGAAGGAAATGGCCG
AGAACGCGGGCTTCATCAGTGTGCCCTGGGGGCAGCACAAGCTGGGCGCG
ATGTACAATACGCCGTTTCCCTCGATAAGCCGCCCGAAGTGCATCGGTGT
GTGCAGCATAAACGCTAGCCGGGAATTTGTGGACGACGCCAGCTGCGCCA
GCTACTTGGCTGGCCAACCGTGGCCACCGCTGCCGTTCGATCTTAACGGG
GGTATAGAGGATGTGATCCGTAAGCCCGTCGAGAACGGCAAACGGGATCT
GGAAATTATGCTGACCTACATTAAGCAACACCAGAAGGAGCTGCTCCGTC
AGAGTAGCTCCGATGCGAGAAATCTACGCCTGGACAGCGACTTTGTAACA
CTGCGCGGTATTTTGCGGCAGATAATGTGCCTGCAGTATGATAATCGCTC
ATTCCGCGTCAAGGCGACGCTCCTGAACGGCAACGTCTACATGTGCAAGG
AGGAAACCCCAGAGCAGCAGCTGGAGAACGCGAACATGAGCAGGGCACAG
CGGGTCATGTGCTCCTGGGGCTTCAAGTTCGAGCAGTACCTGACCAGTGC
CCAGGCGCAGGGAAAACCGGTGACCAATGTGCCGGTCAACGAGGCAGAGG
AGTTCATGGGCGTGTACCGCACGAACCTGGCCGGGATTTTGATGCTATAC
GGCGCCGAACTGGACTGTGTGGACAGCAAGGAGCCAGTTGACTTCAAAGA
TTGCAGAGTGCTCGACTCATTGAAATTCGTAGAGCTAAAGACCAGCGTCT
TCAATATGAACCCTCACCAAATTCGCACCTTCAAATCGTTCAAGTCTGCC
AACTGGTGGAGTCAGTCATTCCTGGTGGGCATCACTACGCTCTACGTGGG
ACTCCGCGACACCAAGGGCATGCTGCAGAGGATCGATGAGATCGATGTGG
CAACACTGGCCCGCAACAAACCGTGGAGTGCATCGGCAATGGCTTGGTAC
CTGGAACAGTTTCTGCGCAATCTTAAGAAGCTGCTGGTGAACATTAACGA
TCCGTTTGCGGTGGTCCAGGTGACTTTTTTAAATAAGCACGCCAGCTACG
AAGTGCTGCGCGGTCCGGAACATCAAATCCTGCCCAACTGGTATCGAGAT
TTGCTCAAAACGCGCTCCTAAGGCAATGCATAACATTTTCTAAACAACAG
CAAGTCTGATTTTATAATGGGAATTAATCGTTTCTTTTTGTAATGCTTCC
CGTACGATAACTACAACTTAGAACTACTGAAAAAAAAAAAAAAAAAAA

MIP23775.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16692208..16692945 738..1 3600 99.2 Minus
chrX 22417052 chrX 16691574..16692120 1279..739 2565 98.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16802557..16803294 738..1 3690 100 Minus
X 23542271 X 16801927..16802469 1281..739 2715 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16810655..16811392 738..1 3690 100 Minus
X 23527363 X 16810025..16810567 1281..739 2715 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:20:20 has no hits.

MIP23775.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:21:17 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16691574..16692120 739..1279 98 <- Minus
chrX 16692208..16692945 1..738 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-03 12:35:47 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:49:48 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:00:03 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:07:23 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 12:35:46 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:49:48 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 1..1128 44..1171 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:00:03 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 51..1329 1..1279 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:07:23 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
CG9125-RA 51..1329 1..1279 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:21:17 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
X 16801929..16802469 739..1279 100 <- Minus
X 16802557..16803294 1..738 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:21:17 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
X 16801929..16802469 739..1279 100 <- Minus
X 16802557..16803294 1..738 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:21:17 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
X 16801929..16802469 739..1279 100 <- Minus
X 16802557..16803294 1..738 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:00:03 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16695962..16696502 739..1279 100 <- Minus
arm_X 16696590..16697327 1..738 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:25:36 Download gff for MIP23775.complete
Subject Subject Range Query Range Percent Splice Strand
X 16810027..16810567 739..1279 100 <- Minus
X 16810655..16811392 1..738 100   Minus

MIP23775.hyp Sequence

Translation from 43 to 1170

> MIP23775.hyp
MAENAGFISVPWGQHKLGAMYNTPFPSISRPKCIGVCSINASREFVDDAS
CASYLAGQPWPPLPFDLNGGIEDVIRKPVENGKRDLEIMLTYIKQHQKEL
LRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKATLLNGNVYM
CKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGKPVTNVPVNE
AEEFMGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLDSLKFVELKT
SVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEI
DVATLARNKPWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKHA
SYEVLRGPEHQILPNWYRDLLKTRS*

MIP23775.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:51:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9125-PA 375 CG9125-PA 1..375 1..375 1977 100 Plus
cuff-PA 384 CG13190-PA 13..364 15..371 161 21.6 Plus

MIP23775.pep Sequence

Translation from 43 to 1170

> MIP23775.pep
MAENAGFISVPWGQHKLGAMYNTPFPSISRPKCIGVCSINASREFVDDAS
CASYLAGQPWPPLPFDLNGGIEDVIRKPVENGKRDLEIMLTYIKQHQKEL
LRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKATLLNGNVYM
CKEETPEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGKPVTNVPVNE
AEEFMGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLDSLKFVELKT
SVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEI
DVATLARNKPWSASAMAWYLEQFLRNLKKLLVNINDPFAVVQVTFLNKHA
SYEVLRGPEHQILPNWYRDLLKTRS*

MIP23775.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21826-PA 374 GF21826-PA 10..372 6..371 1012 54.7 Plus
Dana\GF22700-PA 195 GF22700-PA 1..190 28..222 478 52 Plus
Dana\GF13104-PA 387 GF13104-PA 33..375 25..374 222 22.8 Plus
Dana\GF22305-PA 374 GF22305-PA 28..370 31..372 152 20.9 Plus
Dana\GF22646-PA 374 GF22646-PA 28..370 31..372 152 20.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:00:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18221-PA 376 GG18221-PA 1..372 1..371 1615 79.8 Plus
Dere\GG20228-PA 376 GG20228-PA 23..366 25..375 153 20.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12029-PA 370 GH12029-PA 2..369 4..374 789 44.4 Plus
Dgri\GH21477-PA 274 GH21477-PA 2..260 116..372 215 24.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG9125-PA 375 CG9125-PA 1..375 1..375 1977 100 Plus
cuff-PA 384 CG13190-PA 13..364 15..371 161 21.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:00:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14302-PA 387 GI14302-PA 19..380 15..375 839 47.6 Plus
Dmoj\GI19954-PA 383 GI19954-PA 23..369 25..372 228 22.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18293-PA 379 GL18293-PA 19..376 15..372 873 49 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27396-PA 379 GA27396-PA 19..376 15..372 884 49.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13363-PA 375 GM13363-PA 1..373 1..373 1743 86.1 Plus
Dsec\GM21314-PA 386 GM21314-PA 23..362 25..371 192 23.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15720-PA 375 GD15720-PA 1..375 1..375 1726 84.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19359-PA 382 GJ19359-PA 19..377 15..372 832 46.6 Plus
Dvir\GJ17876-PA 385 GJ17876-PA 10..371 17..372 234 22.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25715-PA 391 GK25715-PA 16..381 10..371 872 47.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:00:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15640-PA 376 GE15640-PA 1..376 1..375 1623 79.3 Plus