BDGP Sequence Production Resources |
Search the DGRC for MIP23840
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 238 |
Well: | 40 |
Vector: | pOT2 |
Associated Gene/Transcript | CG34216-RB |
Protein status: | MIP23840.pep: gold |
Sequenced Size: | 1976 |
1976 bp assembled on 2010-09-13
GenBank Submission: BT125648.1
> MIP23840.complete CACAGACTTGGTGGCATGATTTTGGCCACTAACGATGTTCCAGAAAGGCT GAAACAACTGCAAGCTGCAACCGAGTCAAAATTAAAGTCATGTGACGGTC TAAACAGTAAAGTGGAGCAAGTGCCATGCGAGGAAGAGCTATACCTAGAA CCTTTGAATTAATAGTCATTGCTTCAAGATTATAATGAACGAGTGCAATA CATTCTAAATTCGAGTTCCAATTCAGACAATGCTATGCGCCAGATAACCT TGCATAGCAATAAACATTAAAGCTAGCCTAAGAAAAATTTAATTTCTTTT TTATAAGAAAAACCAAGATATTTATAGAGTAAACTTCTAGCAGTGCCCTT TATGTCTCATAGAAACCGACCATTTCAAAATGTTTGTGCCTCCTTGCGGC TTAGGTTTCGAAAGAAGGTCGTTTATTTGGACCCCAATCAGCATCATTTT TGAAAATTCCAAATTGAAAGTCGGTCCAAGCTGGCTTGTTTACAGTGTTT CAATTCTACTTCTGGCCACCTCGATCGATGTGCATCCACTGCTGTCGCCT CCGCCGGACACCATGTCCACCGATTCCCTACAGCTGTCCACACTGCCCGG TGCGCACCATCTCCAGCTGCTGTCCACTGGGCAGTCGGCCCCTCGCCGAG AATCCTTTCATAAGAGGTCCGGATCGGGAGCCAACCCCCGATCCCTGCGA CACCTTGCCACCGCGCTGGCTGGACCTCAATCGACGGGTCATATTTGCCT TGGCAAAAAGATTATGTCGATCTCCAGAGGCAGCTCATTATATTTTGCTT CGCCTGTTGTATGCCAACTATAGAAAAGTGATGATGATATCCAGAAAACG AAGGAGATACAAGGTGCCACTAAGTGGGTTTCCCGATCAGGATTTGTTCT CCGCCAGCGCACATTTCGATAGCAATGGTTACCTCTCCGATCCCATGGCT CCCGAAACTCTGGGAAAGCTACTCCACATGATGCAGGACTACATCCTTCG GCTGAGAGCGCTGAATCGCAAGTACAAGTGGTGTGGCAACGGCGAGGACT TTGGAGATGTATTGCTCCTATTGGGAGAGCAAGACGAACTGGTACGATTG TTAAGAGATCTCTTTGGAGACAGCGATGTTGTGTCCATTCCAAAGCTCCT GAGCGCCCTTAGCGAGCTGGAAATCAATAATTTATACGGAAAGTACAAGA AGAAAACAGTTCCCTTTATGGTGAGAAGTATATCTGATCTCTACTCCGAA GTGACGGAACCAAAGAGTCCAGTTTTGATATCATTAGCGCACATAGCCAA CAAAGGAGTTTCCCCTTATGGACCGAGCCACTTGAAAAACATCTTGAATT TCAGTCCAAAGTCCTTGCCTATGATGGGTAAACACCCACCGCCTAAAAGA AGTAAAAGTGAAAAATGCATTCCAACATCAAAAACGAATTTAACCCAAGC AGTACAAAATACCCAAAAAAAATCGAATTTCAAGGAACCAGCAGACAGTA CTGGGATTTTAAGTCCAACTTCCAAGAACTTACAATAAGATATCACAGCA AAGCCACTTCAACCAAACCAAAGGAACCTTCTATGAACCCTTTGACGCCC AGAAGAACTCCATCTGGAGTTCCTCCACCACGCAGACTCACATCGATTAA TGACGAATGGTCGGATTGCGGGTCTATTACTATAAAAATCTGGATGACCA ACTGAGGTGATCTACGCAATCCTATCATGGCAGTACCCAGCATTATGATC TTAACAGCAGTACACAGGAAATCTTTAGGCAACTCAACGCAGTCAAGCAA TGAATATGGCAGCTTAACCAAGATGTTTTTATTGGAGCAGTTGTCCGATC CGTTGGTTGAGCTGGAAAAACGGGTGGACTTATTCCTATCGTATCTTCTA TGAATGACGAAACAAACCTATGATTCAACTTAAACGAAATAAAGAAACGA AAAAAAAGCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 6618..6739 | 176..302 | 117 | 62.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3590825..3592675 | 108..1959 | 99 | <- | Minus |
chr2R | 3592734..3592840 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RA | 1..698 | 528..1228 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RA | 1..698 | 528..1228 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RB | 1..1011 | 528..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RB | 1..1011 | 528..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RA | 1..698 | 528..1228 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RA | 1..698 | 528..1228 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RB | 1..1590 | 370..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34216-RB | 1..1590 | 370..1959 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7705416..7705522 | 1..107 | 100 | Minus | |
2R | 7703506..7705357 | 108..1959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7705416..7705522 | 1..107 | 100 | Minus | |
2R | 7703506..7705357 | 108..1959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7705416..7705522 | 1..107 | 100 | Minus | |
2R | 7703506..7705357 | 108..1959 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3591011..3592862 | 108..1959 | 100 | <- | Minus |
arm_2R | 3592921..3593027 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7706615..7706721 | 1..107 | 100 | Minus | |
2R | 7704705..7706556 | 108..1959 | 100 | <- | Minus |
Translation from 527 to 1537
> MIP23840.pep MCIHCCRLRRTPCPPIPYSCPHCPVRTISSCCPLGSRPLAENPFIRGPDR EPTPDPCDTLPPRWLDLNRRVIFALAKRLCRSPEAAHYILLRLLYANYRK VMMISRKRRRYKVPLSGFPDQDLFSASAHFDSNGYLSDPMAPETLGKLLH MMQDYILRLRALNRKYKWCGNGEDFGDVLLLLGEQDELVRLLRDLFGDSD VVSIPKLLSALSELEINNLYGKYKKKTVPFMVRSISDLYSEVTEPKSPVL ISLAHIANKGVSPYGPSHLKNILNFSPKSLPMMGKHPPPKRSKSEKCIPT SKTNLTQAVQNTQKKSNFKEPADSTGILSPTSKNLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11697-PA | 433 | GF11697-PA | 1..253 | 1..245 | 856 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10717-PA | 126 | GG10717-PA | 1..92 | 140..231 | 356 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34216-PB | 336 | CG34216-PB | 1..336 | 1..336 | 1794 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11535-PA | 279 | GL11535-PA | 1..205 | 60..258 | 493 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24763-PA | 336 | GA24763-PA | 1..336 | 1..323 | 626 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20763-PA | 232 | GM20763-PA | 1..231 | 1..231 | 1198 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10227-PA | 239 | GD10227-PA | 1..236 | 1..236 | 1209 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18002-PA | 310 | GK18002-PA | 1..271 | 1..263 | 618 | 49.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23695-PA | 239 | GE23695-PA | 1..236 | 1..236 | 1128 | 89.8 | Plus |
Translation from 527 to 1537
> MIP23840.hyp MCIHCCRLRRTPCPPIPYSCPHCPVRTISSCCPLGSRPLAENPFIRGPDR EPTPDPCDTLPPRWLDLNRRVIFALAKRLCRSPEAAHYILLRLLYANYRK VMMISRKRRRYKVPLSGFPDQDLFSASAHFDSNGYLSDPMAPETLGKLLH MMQDYILRLRALNRKYKWCGNGEDFGDVLLLLGEQDELVRLLRDLFGDSD VVSIPKLLSALSELEINNLYGKYKKKTVPFMVRSISDLYSEVTEPKSPVL ISLAHIANKGVSPYGPSHLKNILNFSPKSLPMMGKHPPPKRSKSEKCIPT SKTNLTQAVQNTQKKSNFKEPADSTGILSPTSKNLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34216-PB | 336 | CG34216-PB | 1..336 | 1..336 | 1794 | 100 | Plus |