Clone MIP24373 Report

Search the DGRC for MIP24373

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:243
Well:73
Vector:pOT2
Associated Gene/TranscriptCG14050-RA
Protein status:MIP24373.pep: gold
Sequenced Size:1403

Clone Sequence Records

MIP24373.complete Sequence

1403 bp assembled on 2010-08-11

GenBank Submission: BT125090.1

> MIP24373.complete
CTCTTTTTAGCACGATCGGACACCCTCTCACTCGCACGATGCAGTTGAAA
ATGACTTTTTGCATGTGTTTTTTTTTTGTTTCTGTTTGCCGTTGCCTTTG
CCTTTTCACACACGCCACTATTTAACCCCAGAGTGGCGATGAGTACTGAA
AATTATTATTTCAAACATATGTACTGATCATAAAACTGTGCGAGAGAACG
TGATAACTTTCTGCCGCATAAACGAACCACTCTCAGCTGTTGAACCGCAA
TCCAAACACTAAATTAATATTATAATCAAGCTAACGAACAAAACCGTTTG
CAACCGGTTCGGCGTATCGGTGTGCTTGCCCGTAAAACCGCAGCTCTCTG
AACCGCTCCTCTCCGAACCGCTCTCACGCTCTCTGGTTCAGAGAACGGTT
TAAACGGTTTTTGCTTGTGATTGTGGCTCGAGCGCGAGAATGAATGTAAG
TTAGTAACCAGCCGTAACTTGAGTACGGTGCAACCCAGAATCGAAAGCTG
AACCGCACGTTCCCATAGTCCGGAACAATGTCGAAAAAGTATCCGAACCC
GGTGACCAAGCACTTCGTCTATAGCGAAAGGACGCGAAAAAGTACCTGCA
AAAGGTGCCACTTCGATATGGCAGGTCGCCACTCCGAGAATCTGATGCGG
CATTTGAAACGTAAGCATGAGGATGCCTACAAAAGTGTTCTGGACGAGAA
GCGAGAAATCCGTGCGGCACTTGCCCAGCAGCAGGCCAACAAAGATGCAG
TCAATCCGACGAAGAAAGTCTTGGCCTCTAAGTATCCTCTATATCCAACG
ACACGAAAGCAGTCTTTCATTACCGAGGACGACGACTCCCAGCACAGTGG
CATGGAAACCATGGTGACGTTGAATGGTGAAGAGACCGGGGACGTAGATA
ACAAGAACAACGCTACAGTCAGTCAGTTCGAGGGCGTTTTTATTGGAAAA
TCGGAGATACCTGACGAGGAGTATCAGTGGAAAAACTCTGCAAATATGGA
ACTGAAGGCCGTCGATGTTTCTGTGGCCCAGACTACTAACGAATCCAGCG
TCTGTGTGGCTCCCACTTCCACCACTGCTCGTGCCAAGTCTCCAGCTCGA
GCCGCATCTTCTGCGGCTGCTTTAGACCAATCTCCAAGCGACGAGGACTA
CTTCCTCCGCTATCTGGGCAGCAAATTAGGCAAATACTCTGCCCGCACAA
GGAACACAGTCCAGTTTCACATTAATCGCATACTGTACAAGGCGGACATG
GGTCACTTTGAGGAAACAGATTCCAGGATGGGCGATGACGACTACGCCTC
CCCGTAGCGTCTCTATGCTATGGTACATATGTTTCTTAACGCTTTTGCTG
TAAATAAAAATTATCTCACGAGTTGTCAAACACCTAAAAAAAAAAAAAAA
AAA

MIP24373.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:14:07
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2219308..2220135 828..1 4095 99.6 Minus
chrX 22417052 chrX 2218665..2219224 1385..826 2800 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2325390..2326217 828..1 4140 100 Minus
X 23542271 X 2324742..2325307 1391..826 2830 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2333488..2334315 828..1 4140 100 Minus
X 23527363 X 2332840..2333405 1391..826 2830 100 Minus
Blast to na_te.dros performed on 2019-03-15 17:14:05 has no hits.

MIP24373.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:15:16 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2218665..2219222 828..1385 100 <- Minus
chrX 2219309..2220135 1..827 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-11 16:05:43 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:50:09 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:17:24 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:31 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-11 16:05:42 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:50:09 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RA 1..780 528..1307 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:17:24 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RB 1..1385 1..1385 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:31 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
CG14050-RB 1..1385 1..1385 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:16 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
X 2324748..2325305 828..1385 100 <- Minus
X 2325391..2326217 1..827 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:16 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
X 2324748..2325305 828..1385 100 <- Minus
X 2325391..2326217 1..827 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:16 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
X 2324748..2325305 828..1385 100 <- Minus
X 2325391..2326217 1..827 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:17:24 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2218781..2219338 828..1385 100 <- Minus
arm_X 2219424..2220250 1..827 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:26:00 Download gff for MIP24373.complete
Subject Subject Range Query Range Percent Splice Strand
X 2332846..2333403 828..1385 100 <- Minus
X 2333489..2334315 1..827 100   Minus

MIP24373.pep Sequence

Translation from 527 to 1306

> MIP24373.pep
MSKKYPNPVTKHFVYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDA
YKSVLDEKREIRAALAQQQANKDAVNPTKKVLASKYPLYPTTRKQSFITE
DDDSQHSGMETMVTLNGEETGDVDNKNNATVSQFEGVFIGKSEIPDEEYQ
WKNSANMELKAVDVSVAQTTNESSVCVAPTSTTARAKSPARAASSAAALD
QSPSDEDYFLRYLGSKLGKYSARTRNTVQFHINRILYKADMGHFEETDSR
MGDDDYASP*

MIP24373.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12623-PA 246 GG12623-PA 1..246 1..259 962 74.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24249-PA 250 GH24249-PA 5..249 4..255 305 35.1 Plus
Dgri\GH19539-PA 202 GH19539-PA 1..201 31..254 250 35.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14050-PB 259 CG14050-PB 1..259 1..259 1346 100 Plus
CG14050-PA 259 CG14050-PA 1..259 1..259 1346 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21444-PA 233 GI21444-PA 4..225 3..249 329 35.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:02:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13380-PA 260 GL13380-PA 1..251 1..249 450 40.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22848-PA 406 GA22848-PA 151..397 5..249 433 39.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:02:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18889-PA 248 GM18889-PA 1..248 1..259 1164 86.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:02:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16371-PA 232 GD16371-PA 1..232 1..259 996 79.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:02:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16465-PA 221 GJ16465-PA 1..221 31..257 253 33.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:02:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10296-PA 243 GK10296-PA 3..173 2..166 270 36 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16953-PA 255 GE16953-PA 1..255 1..259 854 69.2 Plus

MIP24373.hyp Sequence

Translation from 527 to 1306

> MIP24373.hyp
MSKKYPNPVTKHFVYSERTRKSTCKRCHFDMAGRHSENLMRHLKRKHEDA
YKSVLDEKREIRAALAQQQANKDAVNPTKKVLASKYPLYPTTRKQSFITE
DDDSQHSGMETMVTLNGEETGDVDNKNNATVSQFEGVFIGKSEIPDEEYQ
WKNSANMELKAVDVSVAQTTNESSVCVAPTSTTARAKSPARAASSAAALD
QSPSDEDYFLRYLGSKLGKYSARTRNTVQFHINRILYKADMGHFEETDSR
MGDDDYASP*

MIP24373.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:50:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14050-PB 259 CG14050-PB 1..259 1..259 1346 100 Plus
CG14050-PA 259 CG14050-PA 1..259 1..259 1346 100 Plus