Clone MIP24394 Report

Search the DGRC for MIP24394

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:243
Well:94
Vector:pOT2
Associated Gene/Transcriptobst-G-RA
Protein status:MIP24394.pep: gold
Sequenced Size:981

Clone Sequence Records

MIP24394.complete Sequence

981 bp assembled on 2010-08-11

GenBank Submission: BT125099.1

> MIP24394.complete
AAACACTCGATAGCATCACACAAAATGAAGCTATTTGGACTGCTCTGCGT
AATGTTAGTACTTCAAGAAAGTACTCTGGCTGTTGTACAAAACGGATTTG
CGTTCAAGACGTCCTTATGCGAGGGTAAAAATGGTGGACTCTTGCCCATG
TTTGGATCCTGTAAAGGATATTACGTGTGTGCTGATGGAAACGCTGTGAC
CGGAACTTGTGAAAAGAATACGTTGTTTAATCCTTTAACGTTGCACTGCG
ATGATCCTGACAATGTGGATTGCATTTTCGATGGCAAGGATAATATTGTT
GACGACACGTCAAGTTCTGAAAGCGACGAAGACGATGATGAGGAAATGGC
CAAAACTGATCCTCCCGTTACTGTCAAAGCGACGAAAAAGCCGCGTCCTA
CAACCCTTGACAAAATGTGTGCTGGCAAGAAGGATGGAGTGATGCTTACA
AAGAACGGGTCCTGCCAGGAATATTATGTCTGCAAAGCAAAAAAGCCCCA
TCTGCGCTCTTGTCCTGACAAACAACATTTTAGTCCAACTCGTCGCATTT
GCATGAAGGCCTCAGAAGCCAAGTGTTCGGGTGGAACCCGAGAAAATAAA
GAATCAGATGGTCCTGCCACCACGGGAGGAGTGTGTTCAGATGAAAAGGA
AAACTCTCTTGTTGCTCATCGCAGCGATTGTGGCAAGTTTATGCTCTGCA
GCAACATGATGTTTTTGGTAATGGACTGCCCAACTGGCCTGCATTTCAAT
ATAGCCACATCACGATGCGATTATCCCAAAATTGCAAAATGCCAGACGAA
GCTAAATGAAAGCAAATCCAAGTCAAAGAAACCTGTGCGCAAGTCAAAAA
AACGTCGATTCTAACTATATTTTTTTAAGACCCCAATAAAGTGCTTGAAT
TATAATAATTTTTAATAGTCCAAAGCCTAAACAGAGAAAATATAGCCACA
TCATATAGTACTAAAAAAAAAAAAAAAAAAA

MIP24394.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11943142..11944017 962..87 4365 99.9 Minus
chr3L 24539361 chr3L 11944069..11944158 90..1 435 98.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11952296..11953176 967..87 4390 99.9 Minus
3L 28110227 3L 11953228..11953317 90..1 450 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11945396..11946276 967..87 4390 99.8 Minus
3L 28103327 3L 11946328..11946417 90..1 450 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:09:28 has no hits.

MIP24394.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:10:38 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11943142..11944013 91..962 100 <- Minus
chr3L 11944069..11944158 1..90 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-11 16:51:17 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:50:23 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:06 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:03 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-11 16:51:17 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:50:23 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..840 25..864 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:06 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..962 1..962 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:03 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
obst-G-RA 1..962 1..962 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:38 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11952301..11953172 91..962 100 <- Minus
3L 11953228..11953317 1..90 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:38 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11952301..11953172 91..962 100 <- Minus
3L 11953228..11953317 1..90 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:38 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11952301..11953172 91..962 100 <- Minus
3L 11953228..11953317 1..90 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:06 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11945401..11946272 91..962 100 <- Minus
arm_3L 11946328..11946417 1..90 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:26:15 Download gff for MIP24394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11945401..11946272 91..962 100 <- Minus
3L 11946328..11946417 1..90 100   Minus

MIP24394.pep Sequence

Translation from 0 to 863

> MIP24394.pep
KHSIASHKMKLFGLLCVMLVLQESTLAVVQNGFAFKTSLCEGKNGGLLPM
FGSCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIV
DDTSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLT
KNGSCQEYYVCKAKKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENK
ESDGPATTGGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFN
IATSRCDYPKIAKCQTKLNESKSKSKKPVRKSKKRRF*

MIP24394.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24497-PA 273 GF24497-PA 1..268 9..267 812 63.6 Plus
Dana\GF25303-PA 482 GF25303-PA 186..417 43..278 216 27.7 Plus
Dana\GF22750-PA 2318 GF22750-PA 707..939 53..282 188 23.9 Plus
Dana\GF24468-PA 266 GF24468-PA 47..260 54..269 171 24.8 Plus
Dana\GF20105-PA 630 GF20105-PA 412..619 39..267 161 24.5 Plus
Dana\GF25303-PA 482 GF25303-PA 34..305 43..260 149 23.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13868-PA 281 GG13868-PA 1..281 9..287 1174 85.1 Plus
Dere\GG13891-PA 1010 GG13891-PA 808..934 140..264 178 32.3 Plus
Dere\GG13542-PA 290 GG13542-PA 69..284 54..269 176 25.2 Plus
Dere\GG15546-PA 630 GG15546-PA 405..630 37..268 150 23.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14442-PA 298 GH14442-PA 5..280 9..265 757 54.3 Plus
Dgri\GH10759-PA 1696 GH10759-PA 823..963 122..265 149 25.5 Plus
Dgri\GH16816-PA 250 GH16816-PA 6..246 8..269 146 23.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
obst-G-PA 279 CG9781-PA 1..279 9..287 1513 100 Plus
CG4835-PB 1224 CG4835-PB 397..629 43..256 222 26 Plus
CG7248-PA 796 CG7248-PA 541..762 37..264 198 25.7 Plus
Muc68D-PB 1514 CG6004-PB 1311..1512 36..263 193 26.3 Plus
Muc68D-PB 1514 CG6004-PB 1314..1447 140..273 186 29.4 Plus
CG4835-PB 1224 CG4835-PB 273..530 40..256 184 22.8 Plus
CG33986-PB 277 CG33986-PB 56..271 54..269 181 24.8 Plus
CG43896-PD 2113 CG43896-PD 1895..2105 39..270 176 22.8 Plus
CG43896-PC 2113 CG43896-PC 1895..2105 39..270 176 22.8 Plus
CG7248-PA 796 CG7248-PA 59..257 37..262 171 23 Plus
CG43896-PD 2113 CG43896-PD 294..541 43..264 171 23.4 Plus
CG43896-PC 2113 CG43896-PC 294..541 43..264 171 23.4 Plus
CG43896-PB 1324 CG43896-PB 294..541 43..264 171 23.4 Plus
CG7252-PA 474 CG7252-PA 172..395 36..264 170 24.2 Plus
Cht10-PA 2286 CG18140-PA 693..930 43..276 169 24.3 Plus
Cht10-PC 2286 CG18140-PC 693..930 43..276 169 24.3 Plus
Cht10-PB 2286 CG18140-PB 693..930 43..276 169 24.3 Plus
obst-H-PA 269 CG33983-PA 26..264 40..281 165 23.6 Plus
CG7248-PA 796 CG7248-PA 136..338 43..256 157 25.3 Plus
CG7290-PB 419 CG7290-PB 29..218 37..270 156 23.4 Plus
CG7290-PA 419 CG7290-PA 29..218 37..270 156 23.4 Plus
CG7252-PA 474 CG7252-PA 251..472 40..264 153 20.4 Plus
CG7248-PA 796 CG7248-PA 373..590 45..258 152 21.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13576-PA 286 GI13576-PA 5..285 9..286 702 47.7 Plus
Dmoj\GI16946-PA 397 GI16946-PA 179..391 39..270 156 23.7 Plus
Dmoj\GI11738-PA 542 GI11738-PA 395..540 132..264 155 24.5 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 885..993 154..265 151 27.7 Plus
Dmoj\GI12221-PA 269 GI12221-PA 45..265 39..269 149 24.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25069-PA 284 GL25069-PA 1..284 9..287 907 61 Plus
Dper\GL25584-PA 267 GL25584-PA 15..254 24..264 167 24.3 Plus
Dper\GL20457-PA 791 GL20457-PA 578..784 39..271 167 25.4 Plus
Dper\GL25573-PA 271 GL25573-PA 4..269 15..272 154 23.3 Plus
Dper\GL25111-PA 725 GL25111-PA 29..199 54..256 149 22.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22032-PA 284 GA22032-PA 1..284 9..287 910 61.3 Plus
Dpse\GA20212-PA 487 GA20212-PA 199..409 48..265 189 27.7 Plus
Dpse\GA23638-PA 267 GA23638-PA 15..254 24..264 164 23.9 Plus
Dpse\GA23637-PA 271 GA23637-PA 4..267 15..267 153 22.7 Plus
Dpse\GA25359-PA 2487 GA25359-PA 921..1052 126..264 153 28.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24690-PA 279 GM24690-PA 1..279 9..287 1298 93.5 Plus
Dsec\GM24485-PA 274 GM24485-PA 56..268 54..269 171 25.1 Plus
Dsec\GM25312-PA 774 GM25312-PA 521..753 39..277 166 24 Plus
Dsec\GM26719-PA 1602 GM26719-PA 706..941 43..274 156 23.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12760-PA 279 GD12760-PA 1..279 9..287 1320 94.6 Plus
Dsim\GD14344-PA 676 GD14344-PA 419..640 37..264 176 25.4 Plus
Dsim\GD12557-PA 279 GD12557-PA 58..273 54..269 174 26.2 Plus
Dsim\GD12778-PA 600 GD12778-PA 400..533 140..273 165 30.1 Plus
Dsim\GD14344-PA 676 GD14344-PA 251..466 45..256 158 25.2 Plus
Dsim\GD12778-PA 600 GD12778-PA 405..598 44..263 153 25.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13910-PA 291 GJ13910-PA 1..268 9..266 726 52.6 Plus
Dvir\GJ11451-PA 268 GJ11451-PA 51..264 45..269 168 25.5 Plus
Dvir\GJ11412-PA 837 GJ11412-PA 617..837 39..277 152 24 Plus
Dvir\GJ13907-PA 166 GJ13907-PA 58..162 145..258 147 30.4 Plus
Dvir\GJ11769-PA 280 GJ11769-PA 36..167 138..286 145 25.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13607-PA 223 GK13607-PA 1..221 9..215 482 42.9 Plus
Dwil\GK17244-PA 359 GK17244-PA 73..229 111..275 166 26.5 Plus
Dwil\GK16933-PA 2070 GK16933-PA 1850..2057 39..264 152 22.8 Plus
Dwil\GK25277-PA 503 GK25277-PA 203..438 44..278 148 23.9 Plus
Dwil\GK17084-PA 260 GK17084-PA 16..129 138..268 144 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20160-PA 281 GE20160-PA 1..281 9..287 1227 88.3 Plus
Dyak\GE19843-PA 277 GE19843-PA 56..271 54..269 194 27 Plus
Dyak\GE22842-PA 277 GE22842-PA 56..271 54..269 193 27 Plus
Dyak\GE21868-PA 791 GE21868-PA 531..775 37..287 168 23.1 Plus
Dyak\GE17254-PA 2311 GE17254-PA 718..955 43..276 165 23.7 Plus
Dyak\GE21868-PA 791 GE21868-PA 58..258 36..263 154 23.6 Plus

MIP24394.hyp Sequence

Translation from 0 to 863

> MIP24394.hyp
KHSIASHKMKLFGLLCVMLVLQESTLAVVQNGFAFKTSLCEGKNGGLLPM
FGSCKGYYVCADGNAVTGTCEKNTLFNPLTLHCDDPDNVDCIFDGKDNIV
DDTSSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDKMCAGKKDGVMLT
KNGSCQEYYVCKAKKPHLRSCPDKQHFSPTRRICMKASEAKCSGGTRENK
ESDGPATTGGVCSDEKENSLVAHRSDCGKFMLCSNMMFLVMDCPTGLHFN
IATSRCDYPKIAKCQTKLNESKSKSKKPVRKSKKRRF*

MIP24394.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
obst-G-PA 279 CG9781-PA 1..279 9..287 1513 100 Plus
CG4835-PB 1224 CG4835-PB 397..629 43..256 222 26 Plus
CG7248-PA 796 CG7248-PA 541..762 37..264 198 25.7 Plus
Muc68D-PB 1514 CG6004-PB 1311..1512 36..263 193 26.3 Plus
Muc68D-PB 1514 CG6004-PB 1314..1447 140..273 186 29.4 Plus
CG4835-PB 1224 CG4835-PB 273..530 40..256 184 22.8 Plus
CG33986-PB 277 CG33986-PB 56..271 54..269 181 24.8 Plus
CG7248-PA 796 CG7248-PA 59..257 37..262 171 23 Plus
CG7248-PA 796 CG7248-PA 136..338 43..256 157 25.3 Plus
CG7248-PA 796 CG7248-PA 373..590 45..258 152 21.5 Plus