Clone Sequence Records
MIP24414.complete Sequence
648 bp assembled on 2010-08-12
GenBank Submission: BT125110.1
> MIP24414.complete
ATTCAAGGCAATACCAGCTATGAGGACGACCACTCTACTTTTGAGCCTTG
GCCTTCTGGTCCTGTGCTTTTCCAGCTACAGTTTTGCCGAAGACGATCCC
ACCGATGGAAGCACAACGCCTACTGATGGAAGCACCACGCCCACTGATGG
AAGCACCACGCCCACTGATGGAAGCACGACGCCCACTGATGGAAGCAACA
CGCCCACTGATGGAAGCACGACGCCCACTGATGGAAGCACCACGCCCACT
GATGGAAGCACCACGCCCACTGATGGAAGCACCACGCCCACTGATGGAAG
CACCTCCCCATCGACCTCTCCTTCAACAGGCGATAACACTAGTCCTTCAA
CAGGATCGCCAGATAGCACCCCCGATTCCGGAAGCGGCAGCAGCAACAAC
AGCGGCAACAACAAGCGGAACAACCGTCGGAGGCGCCGCCAGCGGGCTCA
ACGCGCTCGACGTCGCCGGGCTCAGCAGGCTCGGCGCAGGAGGAACCGTC
GCAATAACAGGAATAACAGGCTAAGCAGAACCAATAGCATTTAATTTTGT
GCCTACAAAATAAATGTATAAATAAATTGCATATCCTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP24414.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 10390683..10391269 | 1..587 | 2935 | 100 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390944 | 140..304 | 720 | 95.8 | Plus |
| chr3R | 27901430 | chr3R | 10390822..10390986 | 98..262 | 720 | 95.8 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390923 | 161..304 | 600 | 94.4 | Plus |
| chr3R | 27901430 | chr3R | 10390843..10390986 | 98..241 | 600 | 94.4 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390901 | 182..303 | 505 | 94.3 | Plus |
| chr3R | 27901430 | chr3R | 10390864..10390985 | 98..219 | 505 | 94.3 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390879 | 203..302 | 440 | 96 | Plus |
| chr3R | 27901430 | chr3R | 10390885..10390984 | 98..197 | 440 | 96 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390859 | 224..303 | 355 | 96.2 | Plus |
| chr3R | 27901430 | chr3R | 10390906..10390985 | 98..177 | 355 | 96.2 | Plus |
| chr3R | 27901430 | chr3R | 10390780..10390839 | 245..304 | 255 | 95 | Plus |
| chr3R | 27901430 | chr3R | 10390927..10390986 | 98..157 | 255 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14565927..14566520 | 1..594 | 2955 | 99.8 | Plus |
| 3R | 32079331 | 3R | 14566024..14566188 | 140..304 | 720 | 95.8 | Plus |
| 3R | 32079331 | 3R | 14566066..14566230 | 98..262 | 720 | 95.8 | Plus |
| 3R | 32079331 | 3R | 14566024..14566167 | 161..304 | 600 | 94.4 | Plus |
| 3R | 32079331 | 3R | 14566087..14566230 | 98..241 | 600 | 94.4 | Plus |
| 3R | 32079331 | 3R | 14566108..14566229 | 98..219 | 505 | 94.3 | Plus |
| 3R | 32079331 | 3R | 14566024..14566145 | 182..303 | 505 | 94.3 | Plus |
| 3R | 32079331 | 3R | 14566024..14566123 | 203..302 | 440 | 96 | Plus |
| 3R | 32079331 | 3R | 14566129..14566228 | 98..197 | 440 | 96 | Plus |
| 3R | 32079331 | 3R | 14566024..14566103 | 224..303 | 355 | 96.2 | Plus |
| 3R | 32079331 | 3R | 14566150..14566229 | 98..177 | 355 | 96.2 | Plus |
| 3R | 32079331 | 3R | 14566024..14566083 | 245..304 | 255 | 95 | Plus |
| 3R | 32079331 | 3R | 14566171..14566230 | 98..157 | 255 | 95 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 14306758..14307351 | 1..594 | 2955 | 99.8 | Plus |
Blast to na_te.dros performed 2019-03-16 21:09:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6876 | 388..539 | 191 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2516 | 348..543 | 183 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6702..6918 | 325..539 | 171 | 56.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6923 | 330..538 | 162 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6716..6885 | 361..539 | 154 | 57 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1079..1151 | 348..424 | 150 | 70.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6938 | 296..443 | 147 | 58.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2511 | 220..436 | 140 | 55.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2631..2663 | 382..414 | 138 | 90.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2421 | 318..424 | 136 | 59.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1054..1123 | 372..441 | 134 | 65.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6838 | 309..426 | 132 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2293..2555 | 285..545 | 130 | 55.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6859 | 348..414 | 125 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2592..2664 | 379..452 | 124 | 64.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2540 | 310..423 | 121 | 60.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2883 | 348..424 | 121 | 63.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1100..1176 | 348..423 | 120 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2965 | 388..539 | 118 | 56.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1591 | 357..443 | 113 | 60.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2369 | 383..426 | 112 | 72.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..7002 | 276..539 | 112 | 54.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1514..1585 | 341..413 | 111 | 65.3 | Plus |
| TART-A | 13424 | TART-A 13424bp | 907..944 | 379..416 | 109 | 76.3 | Plus |
| TART-A | 13424 | TART-A 13424bp | 8638..8666 | 380..408 | 109 | 86.2 | Plus |
| TART-A | 13424 | TART-A 13424bp | 12085..12122 | 379..416 | 109 | 76.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2293..2448 | 264..424 | 108 | 56.4 | Plus |
MIP24414.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:10:48 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 10390683..10391269 | 1..587 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-12 08:31:45 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:50:36 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:19 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:16 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-12 08:31:44 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:50:36 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..525 | 20..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:19 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..587 | 1..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:16 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14852-RA | 1..587 | 1..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:48 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14565927..14566513 | 1..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:48 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14565927..14566513 | 1..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:10:48 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14565927..14566513 | 1..587 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:19 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10391649..10392235 | 1..587 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:26:31 Download gff for
MIP24414.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14306758..14307344 | 1..587 | 100 | | Plus |
MIP24414.hyp Sequence
Translation from 0 to 543
> MIP24414.hyp
FKAIPAMRTTTLLLSLGLLVLCFSSYSFAEDDPTDGSTTPTDGSTTPTDG
STTPTDGSTTPTDGSNTPTDGSTTPTDGSTTPTDGSTTPTDGSTTPTDGS
TSPSTSPSTGDNTSPSTGSPDSTPDSGSGSSNNSGNNKRNNRRRRRQRAQ
RARRRRAQQARRRRNRRNNRNNRLSRTNSI*
MIP24414.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14852-PA | 174 | CG14852-PA | 1..174 | 7..180 | 909 | 100 | Plus |
| CG34105-PA | 157 | CG34105-PA | 6..155 | 13..173 | 223 | 37.8 | Plus |
| CG12491-PA | 157 | CG12491-PA | 6..155 | 13..173 | 223 | 37.8 | Plus |
| CG13560-PB | 181 | CG13560-PB | 6..179 | 13..170 | 221 | 36.4 | Plus |
| CG13560-PA | 181 | CG13560-PA | 6..179 | 13..170 | 221 | 36.4 | Plus |
MIP24414.pep Sequence
Translation from 1 to 543
> MIP24414.pep
FKAIPAMRTTTLLLSLGLLVLCFSSYSFAEDDPTDGSTTPTDGSTTPTDG
STTPTDGSTTPTDGSNTPTDGSTTPTDGSTTPTDGSTTPTDGSTTPTDGS
TSPSTSPSTGDNTSPSTGSPDSTPDSGSGSSNNSGNNKRNNRRRRRQRAQ
RARRRRAQQARRRRNRRNNRNNRLSRTNSI*
MIP24414.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF17514-PA | 169 | GF17514-PA | 17..103 | 23..102 | 255 | 83.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14852-PA | 174 | CG14852-PA | 1..174 | 7..180 | 909 | 100 | Plus |
| CG12491-PA | 157 | CG12491-PA | 6..155 | 13..173 | 223 | 37.8 | Plus |
| CG34105-PA | 157 | CG34105-PA | 6..155 | 13..173 | 223 | 37.8 | Plus |
| CG13560-PB | 181 | CG13560-PB | 6..179 | 13..170 | 221 | 36.4 | Plus |
| CG13560-PA | 181 | CG13560-PA | 6..179 | 13..170 | 221 | 36.4 | Plus |
| CG14850-PA | 158 | CG14850-PA | 1..157 | 7..177 | 195 | 40.4 | Plus |
| CG14265-PB | 119 | CG14265-PB | 22..118 | 73..170 | 184 | 47.1 | Plus |
| CG14419-PA | 195 | CG14419-PA | 1..183 | 7..175 | 168 | 29.5 | Plus |
| CG11300-PA | 157 | CG11300-PA | 6..156 | 13..174 | 155 | 33.5 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 624..730 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 640..746 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 656..762 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 672..778 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 688..794 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 592..698 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 608..714 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 704..810 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 720..826 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 736..842 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 752..858 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 768..874 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 784..890 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 800..906 | 33..135 | 154 | 41.3 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 816..915 | 33..123 | 151 | 43 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 832..931 | 33..123 | 151 | 43 | Plus |
| vsg-PB | 182 | CG16707-PB | 30..123 | 33..123 | 150 | 43.2 | Plus |
| vsg-PA | 182 | CG16707-PA | 30..123 | 33..123 | 150 | 43.2 | Plus |
| vsg-PE | 262 | CG16707-PE | 30..123 | 33..123 | 150 | 43.2 | Plus |
| CG14453-PA | 133 | CG14453-PA | 25..132 | 76..179 | 148 | 36.1 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 576..682 | 33..135 | 148 | 39.4 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 848..947 | 33..123 | 148 | 42 | Plus |
| Mur29B-PA | 555 | CG31901-PA | 181..309 | 15..141 | 148 | 36.8 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 540..666 | 9..135 | 147 | 35.1 | Plus |
| Sgs1-PA | 1286 | CG3047-PA | 808..921 | 34..133 | 147 | 38.6 | Plus |
| CG34220-PA | 726 | CG34220-PA | 111..201 | 34..124 | 147 | 38.5 | Plus |
| Ppn-PC | 2174 | CG33103-PC | 983..1099 | 24..134 | 147 | 38.3 | Plus |
| Ppn-PF | 2776 | CG33103-PF | 983..1099 | 24..134 | 147 | 38.3 | Plus |
| Ppn-PG | 2841 | CG33103-PG | 983..1099 | 24..134 | 147 | 38.3 | Plus |
| Ppn-PE | 2898 | CG33103-PE | 983..1099 | 24..134 | 147 | 38.3 | Plus |
| Mur29B-PA | 555 | CG31901-PA | 213..341 | 15..141 | 146 | 36.1 | Plus |
| Mur29B-PA | 555 | CG31901-PA | 149..277 | 15..141 | 145 | 36.1 | Plus |
| CG14453-PA | 133 | CG14453-PA | 25..132 | 69..177 | 144 | 33 | Plus |
| vsg-PC | 183 | CG16707-PC | 8..124 | 19..123 | 144 | 39.5 | Plus |
| vsg-PD | 183 | CG16707-PD | 8..124 | 19..123 | 144 | 39.5 | Plus |
| vsg-PC | 183 | CG16707-PC | 10..123 | 12..126 | 143 | 33 | Plus |
| vsg-PD | 183 | CG16707-PD | 10..123 | 12..126 | 143 | 33 | Plus |
| CG15741-PA | 135 | CG15741-PA | 18..131 | 58..177 | 140 | 30 | Plus |
| Pig1-PB | 172 | CG10790-PB | 9..168 | 12..179 | 139 | 26.8 | Plus |
| CG12546-PA | 117 | CG12546-PA | 20..116 | 77..175 | 138 | 35.3 | Plus |
| CG14452-PA | 117 | CG14452-PA | 20..116 | 77..175 | 138 | 35.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:08:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM24170-PA | 145 | GM24170-PA | 9..97 | 15..124 | 199 | 69.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:08:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE24242-PA | 169 | GE24242-PA | 1..108 | 7..118 | 349 | 91.1 | Plus |
