Clone MIP24569 Report

Search the DGRC for MIP24569

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:245
Well:69
Vector:pOT2
Associated Gene/TranscriptCG32679-RA
Protein status:MIP24569.pep: gold
Sequenced Size:901

Clone Sequence Records

MIP24569.complete Sequence

901 bp assembled on 2010-08-11

GenBank Submission: BT125103.1

> MIP24569.complete
ATGAAACCAAAATGTCACGATCTCCCTGCTGGATTTTCCTTTTATATTTG
GTCCTTATCATTTTCACTTTTACTTTCGCACAAAACTATTGCGATCCAGA
ACTGTGTCCCAGTGGAAGACACGTGGCCTGCCAAAACAGCGGTCGCTTTG
TGAGCGGTTGCAGCGGCGAGTTTGTCCAAGTGGATGCCCACATCCCGCTG
ATTCTCCAGCTGCACAACGAACGCCGCAACCTGATCGCTGGCGGTGGAGT
TAGTGGCTTCCCCAGTGCCGTCCAAATGGCCACAATGTCCTGGGACACGA
CACTGGCCCAACTGGCCGCCTACAATGCGCTGCAGTGCCGCATGGCGCAC
GACGAATGCCGCAACACGAACACGTATCGCTATGCCGGCCAGAATCTGAG
CATTCTCTTCACCCGAAGTGTGGATGTGGCGGTCTTCCTGCGCCAACGGA
TCGCCGCCTGGTTCGATGAGAATCGGGATGCGACCAGTGGCGACATGGAG
GACTATCAGATGCGCGGTGGACCAGCAATTGGCCACTTCACCACCATGGT
CAACGAGCGAAATAACCGAGTGGGTTGTGCGATTGCTCGATTTACGGACG
CCAACAATGTGCAGGCCACCCTGCTGGCTTGCAACTACGCGGTCACCAAT
GTGGTGAATAACCCGGTTTACAGGGCGGGAACCGCTGCCTCGGAATGCAC
TACAGGACGAAACTCCAACTATCCGAATCTCTGCTCGCCCAACGAGGTGT
ACAACTATAATCAATGGTCGGGATAAGGGAATGTATGCTATTTAGCATAA
CATTTTCAAGCGTAAATGTGCTGAATTGTTTATTTTTATTTGTACTCGAC
TGCATTTCTGAATATATTTTACACGTATTTATCGAAAAAAAAAAAAAAAA
A

MIP24569.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:56:26
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10258313..10258692 523..144 1900 100 Minus
chrX 22417052 chrX 10257897..10258257 884..524 1805 100 Minus
chrX 22417052 chrX 10258825..10258967 143..1 715 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:56:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10366818..10367197 523..144 1900 100 Minus
X 23542271 X 10366400..10366762 886..524 1815 100 Minus
X 23542271 X 10367330..10367472 143..1 715 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:49:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 10374916..10375295 523..144 1900 100 Minus
X 23527363 X 10374498..10374860 886..524 1815 100 Minus
X 23527363 X 10375428..10375570 143..1 715 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:56:24 has no hits.

MIP24569.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:57:03 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10257897..10258257 524..884 100 <- Minus
chrX 10258313..10258692 144..523 100 <- Minus
chrX 10258825..10258967 1..143 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-11 17:07:32 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:50:28 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:59:44 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:18:02 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-11 17:07:31 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:50:27 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..765 12..776 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:59:44 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..884 1..884 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:18:02 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
CG32679-RA 1..884 1..884 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:57:03 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
X 10366402..10366762 524..884 100 <- Minus
X 10366818..10367197 144..523 100 <- Minus
X 10367330..10367472 1..143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:57:03 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
X 10366402..10366762 524..884 100 <- Minus
X 10366818..10367197 144..523 100 <- Minus
X 10367330..10367472 1..143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:57:03 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
X 10366402..10366762 524..884 100 <- Minus
X 10366818..10367197 144..523 100 <- Minus
X 10367330..10367472 1..143 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:59:44 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10261363..10261505 1..143 100   Minus
arm_X 10260851..10261230 144..523 100 <- Minus
arm_X 10260435..10260795 524..884 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:26:21 Download gff for MIP24569.complete
Subject Subject Range Query Range Percent Splice Strand
X 10374500..10374860 524..884 100 <- Minus
X 10374916..10375295 144..523 100 <- Minus
X 10375428..10375570 1..143 100   Minus

MIP24569.pep Sequence

Translation from 2 to 775

> MIP24569.pep
ETKMSRSPCWIFLLYLVLIIFTFTFAQNYCDPELCPSGRHVACQNSGRFV
SGCSGEFVQVDAHIPLILQLHNERRNLIAGGGVSGFPSAVQMATMSWDTT
LAQLAAYNALQCRMAHDECRNTNTYRYAGQNLSILFTRSVDVAVFLRQRI
AAWFDENRDATSGDMEDYQMRGGPAIGHFTTMVNERNNRVGCAIARFTDA
NNVQATLLACNYAVTNVVNNPVYRAGTAASECTTGRNSNYPNLCSPNEVY
NYNQWSG*

MIP24569.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20496-PA 256 GF20496-PA 10..256 11..256 1060 78.1 Plus
Dana\GF21595-PA 256 GF21595-PA 8..255 14..251 481 41.4 Plus
Dana\GF21598-PA 255 GF21598-PA 9..255 16..255 456 38.3 Plus
Dana\GF12100-PA 263 GF12100-PA 6..259 10..253 431 40.1 Plus
Dana\GF12099-PA 263 GF12099-PA 6..262 4..253 399 35.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18928-PA 253 GG18928-PA 1..253 4..257 1210 89 Plus
Dere\GG19450-PA 288 GG19450-PA 37..288 11..255 460 38.3 Plus
Dere\GG20782-PA 263 GG20782-PA 12..260 17..254 443 41.3 Plus
Dere\GG20780-PA 261 GG20780-PA 10..260 14..253 415 39 Plus
Dere\GG19449-PA 256 GG19449-PA 7..255 11..256 392 38.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12878-PA 260 GH12878-PA 27..260 26..257 890 68.8 Plus
Dgri\GH12214-PA 256 GH12214-PA 4..252 11..253 427 39.2 Plus
Dgri\GH12213-PA 256 GH12213-PA 1..254 13..250 421 39.4 Plus
Dgri\GH21184-PA 264 GH21184-PA 11..263 11..253 412 36.4 Plus
Dgri\GH24697-PA 274 GH24697-PA 14..270 9..253 412 36 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG32679-PA 254 CG32679-PA 1..254 4..257 1368 100 Plus
Ag5r2-PA 254 CG9540-PA 5..254 13..255 465 38.2 Plus
CG9822-PA 263 CG9822-PA 12..259 17..253 436 40.6 Plus
CG17974-PA 259 CG17974-PA 5..258 11..253 422 38.2 Plus
Ag5r-PC 256 CG9538-PC 6..252 13..253 405 36.7 Plus
Ag5r-PB 256 CG9538-PB 6..252 13..253 405 36.7 Plus
Ag5r-PA 256 CG9538-PA 6..252 13..253 405 36.7 Plus
CG9400-PA 308 CG9400-PA 35..288 16..251 373 35.4 Plus
scpr-C-PB 262 CG5106-PB 6..251 14..251 370 34.7 Plus
scpr-C-PA 262 CG5106-PA 6..251 14..251 370 34.7 Plus
scpr-A-PA 264 CG5207-PA 7..253 13..251 370 34.9 Plus
scpr-B-PA 262 CG17210-PA 6..251 14..251 369 34.7 Plus
CG42780-PB 254 CG42780-PB 8..252 11..245 347 33.2 Plus
CG42780-PA 253 CG42780-PA 8..251 11..245 345 32.5 Plus
CG6628-PA 277 CG6628-PA 30..260 28..250 335 33 Plus
CG3640-PA 296 CG3640-PA 7..253 10..253 330 33.5 Plus
CG17575-PA 291 CG17575-PA 6..289 10..257 322 30.8 Plus
CG17575-PB 298 CG17575-PB 6..296 10..257 322 30.4 Plus
CG42564-PA 500 CG10284-PA 54..283 28..250 313 34.6 Plus
CG34002-PB 350 CG34002-PB 1..255 4..248 274 30.4 Plus
CG10651-PB 316 CG10651-PB 5..252 11..249 259 30.8 Plus
CG10651-PA 316 CG10651-PA 5..252 11..249 259 30.8 Plus
CG30486-PA 263 CG30486-PA 1..255 13..253 246 29.1 Plus
CG43775-PA 272 CG43775-PA 5..262 11..244 203 28.1 Plus
antr-PB 272 CG30488-PB 3..254 11..253 196 26.4 Plus
CG8072-PA 247 CG8072-PA 8..240 14..244 191 27 Plus
antr-PA 265 CG30488-PA 3..247 11..253 190 25.8 Plus
CG8483-PA 392 CG8483-PA 39..229 66..253 190 32.2 Plus
CG43777-PA 273 CG43777-PA 5..257 13..244 179 24.8 Plus
CG43777-PC 273 CG43777-PC 5..257 13..244 179 24.8 Plus
CG43777-PB 273 CG43777-PB 5..257 13..244 179 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15744-PA 256 GI15744-PA 23..255 28..251 438 41.5 Plus
Dmoj\GI20472-PA 267 GI20472-PA 30..267 29..255 412 42.3 Plus
Dmoj\GI15745-PA 257 GI15745-PA 4..255 11..256 404 37.9 Plus
Dmoj\GI20471-PA 263 GI20471-PA 11..262 11..253 401 35.3 Plus
Dmoj\GI15747-PA 256 GI15747-PA 4..252 11..253 384 36.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15814-PA 191 GL15814-PA 18..180 12..174 737 82.8 Plus
Dper\GL20410-PA 254 GL20410-PA 20..254 28..255 448 40.3 Plus
Dper\GL11847-PA 263 GL11847-PA 7..257 12..253 434 39 Plus
Dper\GL20409-PA 257 GL20409-PA 4..253 11..253 398 35.1 Plus
Dper\GL11846-PA 261 GL11846-PA 12..260 16..253 379 36.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23354-PA 263 GA23354-PA 18..263 12..257 1121 83.7 Plus
Dpse\GA29233-PA 258 GA29233-PA 1..257 4..251 464 41.5 Plus
Dpse\GA21866-PA 254 GA21866-PA 20..254 28..255 448 40.3 Plus
Dpse\GA22059-PA 263 GA22059-PA 7..257 12..253 434 39 Plus
Dpse\GA21864-PA 257 GA21864-PA 4..253 11..253 390 34.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11319-PA 237 GM11319-PA 8..237 28..257 1203 97.4 Plus
Dsec\GM12040-PA 254 GM12040-PA 3..254 13..255 469 39.9 Plus
Dsec\GM15726-PA 263 GM15726-PA 12..260 17..254 436 40.5 Plus
Dsec\GM15725-PA 258 GM15725-PA 5..257 16..253 416 38.7 Plus
Dsec\GM12039-PA 256 GM12039-PA 7..255 11..256 393 37.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16039-PA 254 GD16039-PA 1..254 4..257 1333 97.2 Plus
Dsim\GD25203-PA 263 GD25203-PA 12..260 17..254 440 40.5 Plus
Dsim\GD25202-PA 258 GD25202-PA 4..257 11..253 426 38.6 Plus
Dsim\GD18744-PA 277 GD18744-PA 7..253 13..251 369 34.9 Plus
Dsim\GD20669-PA 262 GD20669-PA 18..251 26..251 368 36 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18491-PA 324 GJ18491-PA 74..323 16..256 972 72 Plus
Dvir\GJ14736-PA 270 GJ14736-PA 6..264 2..253 427 38.5 Plus
Dvir\GJ18605-PA 253 GJ18605-PA 1..252 13..251 423 41.8 Plus
Dvir\GJ18606-PA 256 GJ18606-PA 4..252 11..253 418 38 Plus
Dvir\GJ22321-PA 263 GJ22321-PA 13..262 17..253 411 37.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25699-PA 253 GK25699-PA 7..253 13..257 1044 79.8 Plus
Dwil\GK18435-PA 257 GK18435-PA 23..256 26..251 481 43.6 Plus
Dwil\GK14741-PA 240 GK14741-PA 6..238 28..250 471 42.7 Plus
Dwil\GK14719-PA 256 GK14719-PA 20..256 26..255 455 40.8 Plus
Dwil\GK14730-PA 256 GK14730-PA 17..255 23..251 434 42.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15398-PA 253 GE15398-PA 1..253 4..257 1241 92.1 Plus
Dyak\GE16103-PA 283 GE16103-PA 32..283 11..255 461 38.7 Plus
Dyak\GE13719-PA 263 GE13719-PA 12..260 17..254 444 41.3 Plus
Dyak\GE13718-PA 262 GE13718-PA 10..261 13..253 417 38.9 Plus
Dyak\Ag5r-PA 256 GE16102-PA 7..255 11..256 387 37.2 Plus

MIP24569.hyp Sequence

Translation from 2 to 775

> MIP24569.hyp
ETKMSRSPCWIFLLYLVLIIFTFTFAQNYCDPELCPSGRHVACQNSGRFV
SGCSGEFVQVDAHIPLILQLHNERRNLIAGGGVSGFPSAVQMATMSWDTT
LAQLAAYNALQCRMAHDECRNTNTYRYAGQNLSILFTRSVDVAVFLRQRI
AAWFDENRDATSGDMEDYQMRGGPAIGHFTTMVNERNNRVGCAIARFTDA
NNVQATLLACNYAVTNVVNNPVYRAGTAASECTTGRNSNYPNLCSPNEVY
NYNQWSG*

MIP24569.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG32679-PA 254 CG32679-PA 1..254 4..257 1368 100 Plus
Ag5r2-PA 254 CG9540-PA 5..254 13..255 465 38.2 Plus
CG9822-PA 263 CG9822-PA 12..259 17..253 436 40.6 Plus
CG17974-PA 259 CG17974-PA 5..258 11..253 422 38.2 Plus
Ag5r-PC 256 CG9538-PC 6..252 13..253 405 36.7 Plus