Clone MIP25726 Report

Search the DGRC for MIP25726

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:257
Well:26
Vector:pOT2
Associated Gene/TranscriptCG42264-RB
Protein status:MIP25726.pep: gold
Sequenced Size:1766

Clone Sequence Records

MIP25726.complete Sequence

1766 bp assembled on 2010-08-23

GenBank Submission: BT125602.1

> MIP25726.complete
ATCGATCGCACCGCAATATTGGCAAGATCCAGAAACCGAACGATACTATA
CCAAAAGATACCAATAATATGCACCGCCTACCCTGGAAGTGGGCGTGGCT
GCCACTGCTGCTACTAATTACTGCGAAATTGGAGCAGGTGGGCGGCAAAA
CATATCTGGATTGGGCGCGCACCGATAGTCAGCTAACGAGACTACCATTC
TTTGGCGGCGGTGTGGGTCACCTGCTGCGATATCTGCACCCATTGTCGAT
GAGTCCCCCATCCGAACGCGGCAAAATCTCGGAGCTACGCAGCGAATTGG
ATGCCAACTATGTGAGCTACCGTGGTGCGCAGCTCTGGAAGCTGAACTTC
AATGCCACCCGGGGCTCGTCCATGGCGGAGCGGGAGGAGGACGATGAGGC
GGCTGAGAAGCGACAGGTGCTGGCTTCACCGGATGCCCAATTCAATGAGG
TGGTCGCATTATTCGGCAGCGAGGTGTGGAATATCAACCAGGATGGCATC
GACATCCTCATCGAGCAACGCAATGTAGCCGATGCACGAAAGTTCATGGA
CAAGGTGGGCTACAGCTACAACATAATGATCGATGACATCGAGTCGGCGA
TCGATGAGAGCTACGTGGAAGTTCCGGCCGTGGAACATCCATTGGATTCC
GTGCGCAACAATTCGCTGCCATGGATGGAAGTGCCGGGTTCAACGATGAA
CTGGCGGCGTTACCACGATCAGGCGGACATTAAGCAGTTCCTGCAGACGC
TGCTCGAAACCTACTCGGAAAATGTGGAACTAATCCAGATAGGGGTCACG
CGCAACAAGCGACCGCTGGAGGTCATCAGGGTCTCCAATGGGAATCCGGA
CAATTGGGCGGTGTTCGTGGATGCTGGACTGCAGGCCAGGGATTGGTTAA
GTCCTGCCGCCCTCACTTACGCCATATCCAAGCTAACCCATCTCTGGGGC
AGGCCAAAGGGCAAGGACAAGGGTGAAGGTCAGAGGCAGAGCAGAGCGGA
GAAGGCGATGCGCCGCATCGATTGGTACTTCCTGCCATTGGCAAATCCAG
ATGGCTACCAGTACTCCCGCCAGACGGATCGCCTGTGGACCAAAAACCGT
GGCTACGACAGTGTCAGTGGTTGTTATGGTGTAAATTTGGATCGAAACTT
CGACTACGGCTGGGACGGCACCGGATCGACGAGCAATCCCTGCAAGAATC
TCTATCGCGGAGCCCATAGCTTCTCCGAGCCAGAGAGCCGAGCCGTGTGC
AGCTTCCTCTCCGGAATGCGCGAGTATCTGGGTGCCTATGTCTCCCTGGG
CGGCTATGGACAGGCCATCACGTATCCCTGGGGCGATGCGGACTACGTGA
CGGAGAATCAAAGGAATCTCAAGCAGACAGCTAGAAGGGCAGTTCTCGCA
CTGAGGCGACTCAATCAGGCGGAGTATTCGTCGGGCACCAGTTATCGCCA
AAAGTTGGCGCGACCGGGCAACTCGGCCGATTGGGTGCAGGATCGCATTG
GACCGCAGCTGGTGTTCAATATGTTCCTCAAGGATCAGGGACGCTATGGC
TACCTGCTGCCGCCGCACTATATCGTGGAGTCCGGCGAGGAGGTCTTCGA
GTTCCTGCGCATCATTGCCCAGCAATTGCAGTAAACTAAAACATTCTCCA
CTCAACTATCTAATATAATCTACAAGTTGGTAGGAAACTCTTGAAATATT
TCATACATATGTATTTGAAAAACTATTTAATATAAATAGTTAACTCTGAA
AAAAAAAAAAAAAAAA

MIP25726.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5665438..5666362 1748..826 4350 98.5 Minus
chrX 22417052 chrX 5668598..5669063 466..1 2315 99.8 Minus
chrX 22417052 chrX 5666422..5666787 830..465 1830 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5773023..5773945 1748..826 4615 100 Minus
X 23542271 X 5776182..5776647 466..1 2330 100 Minus
X 23542271 X 5774005..5774370 830..465 1830 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5781121..5782043 1748..826 4615 100 Minus
X 23527363 X 5784280..5784745 466..1 2330 100 Minus
X 23527363 X 5782103..5782468 830..465 1830 100 Minus
Blast to na_te.dros performed on 2019-03-16 11:15:09 has no hits.

MIP25726.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:15:49 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5665438..5666358 830..1748 98 <- Minus
chrX 5666423..5666786 466..829 100 <- Minus
chrX 5668599..5669063 1..465 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-23 10:50:32 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RA 1..399 69..467 99 <- Plus
CG42264-RA 739..1905 468..1634 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:39:59 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RA 1..399 69..467 99 <- Plus
CG42264-RA 739..1905 468..1634 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 11:38:39 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RB 1..1566 69..1634 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:09:21 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RB 1..1566 69..1634 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-23 10:50:32 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RA 1..399 69..467 99 <- Plus
CG42264-RA 739..1905 468..1634 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:39:59 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RA 1..399 69..467 99 <- Plus
CG42264-RA 739..1905 468..1634 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:39 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RB 1..1748 1..1748 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:09:21 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
CG42264-RB 1..1748 1..1748 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:15:49 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
X 5774006..5774369 466..829 100 <- Minus
X 5773023..5773941 830..1748 100 <- Minus
X 5776183..5776647 1..465 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:15:49 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
X 5774006..5774369 466..829 100 <- Minus
X 5773023..5773941 830..1748 100 <- Minus
X 5776183..5776647 1..465 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:15:49 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
X 5774006..5774369 466..829 100 <- Minus
X 5773023..5773941 830..1748 100 <- Minus
X 5776183..5776647 1..465 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:39 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5667056..5667974 830..1748 100 <- Minus
arm_X 5668039..5668402 466..829 100 <- Minus
arm_X 5670216..5670680 1..465 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:43:12 Download gff for MIP25726.complete
Subject Subject Range Query Range Percent Splice Strand
X 5781121..5782039 830..1748 100 <- Minus
X 5782104..5782467 466..829 100 <- Minus
X 5784281..5784745 1..465 100   Minus

MIP25726.pep Sequence

Translation from 2 to 1633

> MIP25726.pep
RSHRNIGKIQKPNDTIPKDTNNMHRLPWKWAWLPLLLLITAKLEQVGGKT
YLDWARTDSQLTRLPFFGGGVGHLLRYLHPLSMSPPSERGKISELRSELD
ANYVSYRGAQLWKLNFNATRGSSMAEREEDDEAAEKRQVLASPDAQFNEV
VALFGSEVWNINQDGIDILIEQRNVADARKFMDKVGYSYNIMIDDIESAI
DESYVEVPAVEHPLDSVRNNSLPWMEVPGSTMNWRRYHDQADIKQFLQTL
LETYSENVELIQIGVTRNKRPLEVIRVSNGNPDNWAVFVDAGLQARDWLS
PAALTYAISKLTHLWGRPKGKDKGEGQRQSRAEKAMRRIDWYFLPLANPD
GYQYSRQTDRLWTKNRGYDSVSGCYGVNLDRNFDYGWDGTGSTSNPCKNL
YRGAHSFSEPESRAVCSFLSGMREYLGAYVSLGGYGQAITYPWGDADYVT
ENQRNLKQTARRAVLALRRLNQAEYSSGTSYRQKLARPGNSADWVQDRIG
PQLVFNMFLKDQGRYGYLLPPHYIVESGEEVFEFLRIIAQQLQ*

MIP25726.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21070-PA 503 GF21070-PA 117..503 154..543 1777 83.8 Plus
Dana\GF21071-PA 447 GF21071-PA 5..441 71..543 630 31.8 Plus
Dana\GF21068-PA 1102 GF21068-PA 674..1073 96..542 618 31.2 Plus
Dana\GF21828-PA 1495 GF21828-PA 1089..1488 167..535 446 29.3 Plus
Dana\GF22810-PA 427 GF22810-PA 35..420 125..543 437 26.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18470-PA 381 GG18470-PA 106..381 264..543 1330 89.6 Plus
Dere\GG16347-PA 253 GG16347-PA 118..240 154..276 647 99.2 Plus
Dere\GG18471-PA 447 GG18471-PA 32..441 97..542 609 32.6 Plus
Dere\GG16598-PA 183 GG16598-PA 1..136 23..155 575 85.3 Plus
Dere\GG16346-PA 138 GG16346-PA 1..135 23..154 566 85.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24584-PA 498 GH24584-PA 87..493 100..542 1466 62.5 Plus
Dgri\GH24581-PA 1065 GH24581-PA 613..1032 74..539 629 30.3 Plus
Dgri\GH24586-PA 440 GH24586-PA 68..439 154..542 628 34.2 Plus
Dgri\GH17895-PA 1376 GH17895-PA 967..1369 167..535 449 28.9 Plus
Dgri\GH10071-PA 430 GH10071-PA 64..408 158..532 420 28.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG42264-PB 521 CG42264-PB 1..521 23..543 2775 100 Plus
CG42264-PA 634 CG42264-PA 245..634 154..543 2086 100 Plus
CG42264-PA 634 CG42264-PA 1..132 23..154 695 100 Plus
CG3108-PA 1132 CG3108-PA 710..1112 93..542 622 30.6 Plus
CG3097-PA 445 CG3097-PA 32..439 99..542 611 33.2 Plus
CG8945-PC 1430 CG8945-PC 979..1423 104..535 436 27.9 Plus
CG4408-PB 467 CG4408-PB 111..459 166..541 433 27.4 Plus
CG4408-PA 479 CG4408-PA 123..471 166..541 433 27.4 Plus
CG4017-PA 424 CG4017-PA 115..408 233..535 432 30.5 Plus
CG18585-PB 422 CG18585-PB 69..405 166..531 421 26.1 Plus
CG18585-PA 422 CG18585-PA 69..405 166..531 421 26.1 Plus
CG14820-PA 416 CG14820-PA 65..408 167..539 409 27.6 Plus
CG17633-PA 430 CG17633-PA 36..424 130..543 405 24.4 Plus
CG2915-PA 453 CG2915-PA 97..444 166..540 398 24.3 Plus
CG2915-PB 453 CG2915-PB 97..444 166..540 398 24.3 Plus
CG8560-PB 418 CG8560-PB 64..367 168..494 379 26.4 Plus
CG8560-PA 418 CG8560-PA 64..367 168..494 379 26.4 Plus
CG8562-PA 424 CG8562-PA 119..420 232..542 362 29 Plus
CG7025-PA 429 CG7025-PA 60..405 158..530 361 23.4 Plus
CG12374-PA 422 CG12374-PA 85..414 180..541 359 28 Plus
CG18417-PA 427 CG18417-PA 126..359 236..480 359 32.5 Plus
CG32379-PB 344 CG32379-PB 44..313 237..517 356 27.1 Plus
CG8564-PA 504 CG8564-PA 38..356 237..536 311 28 Plus
CG8564-PC 520 CG8564-PC 54..372 237..536 311 28 Plus
CG8539-PB 385 CG8539-PB 30..252 229..461 301 32.6 Plus
CG8539-PA 385 CG8539-PA 30..252 229..461 301 32.6 Plus
CG8563-PB 440 CG8563-PB 141..438 229..539 282 24.8 Plus
CG8563-PA 440 CG8563-PA 141..438 229..539 282 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15254-PA 493 GI15254-PA 115..493 154..543 1511 70.1 Plus
Dmoj\GI15252-PA 1160 GI15252-PA 738..1140 93..542 608 31 Plus
Dmoj\GI15255-PA 449 GI15255-PA 76..448 154..542 579 32.7 Plus
Dmoj\GI15622-PA 426 GI15622-PA 36..420 125..543 441 26.8 Plus
Dmoj\GI12969-PA 416 GI12969-PA 65..401 167..533 433 28.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15221-PA 501 GL15221-PA 64..501 75..543 1563 65.2 Plus
Dper\GL15219-PA 1131 GL15219-PA 713..1111 97..542 620 31.2 Plus
Dper\GL15222-PA 469 GL15222-PA 43..448 99..540 606 31.3 Plus
Dper\GL13854-PA 434 GL13854-PA 77..426 166..541 436 27.1 Plus
Dper\GL18934-PA 425 GL18934-PA 38..418 132..542 424 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22915-PA 499 GA22915-PA 62..499 75..543 1646 67.7 Plus
Dpse\GA22916-PA 451 GA22916-PA 43..450 99..542 607 31.2 Plus
Dpse\GA15990-PA 1118 GA15990-PA 711..1098 96..542 590 30.7 Plus
Dpse\GA26945-PA 434 GA26945-PA 77..426 166..541 435 27.1 Plus
Dpse\GA14587-PA 425 GA14587-PA 38..418 132..542 423 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12619-PA 410 GM12619-PA 95..410 227..542 1647 97.2 Plus
Dsec\GM12618-PA 158 GM12618-PA 1..133 23..155 685 97 Plus
Dsec\GM12616-PA 926 GM12616-PA 504..906 93..542 617 31.2 Plus
Dsec\GM13467-PA 422 GM13467-PA 69..406 166..532 422 26.1 Plus
Dsec\GM17686-PA 424 GM17686-PA 115..417 233..540 421 30.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16232-PA 482 GD16232-PA 88..482 148..542 2041 96.5 Plus
Dsim\GD16231-PA 158 GD16231-PA 1..133 23..155 696 97.7 Plus
Dsim\GD16230-PA 1114 GD16230-PA 692..1094 93..542 615 31.2 Plus
Dsim\GD16233-PA 427 GD16233-PA 60..421 162..542 578 33.3 Plus
Dsim\GD23628-PA 424 GD23628-PA 115..417 233..540 420 30.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14827-PA 492 GJ14827-PA 85..491 100..542 1531 65.9 Plus
Dvir\GJ14828-PA 441 GJ14828-PA 69..440 154..542 623 32.1 Plus
Dvir\GJ14824-PA 988 GJ14824-PA 566..965 96..542 618 31 Plus
Dvir\GJ24099-PA 446 GJ24099-PA 89..438 166..541 436 27.4 Plus
Dvir\GJ16228-PA 421 GJ16228-PA 69..405 166..532 432 26.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25780-PA 507 GK25780-PA 128..507 154..543 1489 70.7 Plus
Dwil\GK25779-PA 1170 GK25779-PA 722..1148 74..542 623 30.4 Plus
Dwil\GK25782-PA 446 GK25782-PA 38..445 99..542 598 30.9 Plus
Dwil\GK23953-PA 418 GK23953-PA 87..402 202..532 452 30.4 Plus
Dwil\GK17666-PA 1302 GK17666-PA 889..1295 167..535 447 28.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16787-PA 503 GE16787-PA 118..503 154..543 1977 94.6 Plus
Dyak\GE16788-PA 444 GE16788-PA 29..438 97..542 614 33 Plus
Dyak\GE16785-PA 1131 GE16785-PA 709..1111 93..542 600 31.4 Plus
Dyak\GE16786-PA 138 GE16786-PA 1..135 23..156 552 85.9 Plus
Dyak\GE15623-PA 1448 GE15623-PA 1043..1441 167..535 452 30.5 Plus

MIP25726.hyp Sequence

Translation from 2 to 1633

> MIP25726.hyp
RSHRNIGKIQKPNDTIPKDTNNMHRLPWKWAWLPLLLLITAKLEQVGGKT
YLDWARTDSQLTRLPFFGGGVGHLLRYLHPLSMSPPSERGKISELRSELD
ANYVSYRGAQLWKLNFNATRGSSMAEREEDDEAAEKRQVLASPDAQFNEV
VALFGSEVWNINQDGIDILIEQRNVADARKFMDKVGYSYNIMIDDIESAI
DESYVEVPAVEHPLDSVRNNSLPWMEVPGSTMNWRRYHDQADIKQFLQTL
LETYSENVELIQIGVTRNKRPLEVIRVSNGNPDNWAVFVDAGLQARDWLS
PAALTYAISKLTHLWGRPKGKDKGEGQRQSRAEKAMRRIDWYFLPLANPD
GYQYSRQTDRLWTKNRGYDSVSGCYGVNLDRNFDYGWDGTGSTSNPCKNL
YRGAHSFSEPESRAVCSFLSGMREYLGAYVSLGGYGQAITYPWGDADYVT
ENQRNLKQTARRAVLALRRLNQAEYSSGTSYRQKLARPGNSADWVQDRIG
PQLVFNMFLKDQGRYGYLLPPHYIVESGEEVFEFLRIIAQQLQ*

MIP25726.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42264-PB 521 CG42264-PB 1..521 23..543 2775 100 Plus
CG42264-PA 634 CG42264-PA 245..634 154..543 2086 100 Plus
CG42264-PA 634 CG42264-PA 1..132 23..154 695 100 Plus
CG3108-PA 1132 CG3108-PA 710..1112 93..542 622 30.6 Plus
CG3097-PA 445 CG3097-PA 32..439 99..542 611 33.2 Plus
CG4017-PA 424 CG4017-PA 115..408 233..535 432 30.5 Plus