Clone MIP25937 Report

Search the DGRC for MIP25937

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:259
Well:37
Vector:pOT2
Associated Gene/TranscriptCG14527-RA
Protein status:MIP25937.pep: gold
Sequenced Size:2171

Clone Sequence Records

MIP25937.complete Sequence

2171 bp assembled on 2010-12-01

GenBank Submission: BT125789.1

> MIP25937.complete
AAAAGAGACACATGACGATGAAATTGTTCTGCATTTGGATTGCTAGTCAC
GTTCTCAGTGTTCTGGTTTTAGCGGCCCCCACAAGCGAGGATGTACTCAA
CCAGGACACGCCTTACATGAAGGAACTAATGCGTCAAGCCAAAGCTGCTG
AGATCGAGAGCTTTATGAACCAGAAGGTGGATCCGTGCAAGGATTTCTAC
GCATTCTCCTGTGGCAACTATAAACGCATCAACTCGGCTTTGAACATGCG
GGTATTGACTACTGGAGTGTTCGAGACTTTGACAAAAGGGCTCAACCGAA
AGATCCTGAAGATGCTCAACACACCCCATGATAGCCACGACACTCCGGAG
GACATTCAGGTGAAGCACTTCTACGAGTCCTGTCTCCAGATCAAGGAGCT
CAACTCGACGTACAGCGAAAAGCTGAAGCGGCTCATTGCAGAATTTGGAA
CGATGCCGCTGCTGGAAGGATCCTCCTGGCAGGAGGACGACTTTGACTGG
CTGAATACTACTGCTCGCATGGCCCACCGATACGGAATAATGTCCATTAT
AGGCGTTGGAGTCGCCACGGACTTCGCCAATAACCAAAAAAACATTATTT
ACATAAACCAGCAGGAGTTCCCATTAAAGACACGTTCCATGTATATGGAT
AACGAAACGGCCATCTACCGCCAAAATTATCAGAATAATATCCAGCTCAT
TTTGGAGAAATACTTAGGTGTTAAGGACGAATTGGCAAGAAAAGCGGCCA
AGGAAATGTTTGAATTCGAGGTGGACTTGGCCCATGGACTGGTGGACAAC
AACAAACACCTGAACCTAAGGGACCTGATCGAACTTCTGACTGTCGCTGA
ATTGCGCGAGAGATATGCCCCCACCTTGGACACCGACCAATTGATATTCG
TGAGCATGGGAGAGAAGATTTCCGACAAGGTCTACGAATACAACAGACGT
TATCAGCAAAATTTGGTCGAGGTGATCGAGCGTACGCCCAAGAGCACTGT
GGCCAACTATTTATTCCTTCGCCTGATCTGGGAGTTTATACAGAAACCAA
GTGGAGTGGCGGAAAAGCCGACAGAGGCCTGTGTGGACTTCACCAAGACG
TACTTCGCGAAGAATCTGGACAACATGATCTACCGCCGCTACAAAAACGA
GAAATCCTCCAGAGAAATCGACAGCATGTGGCATCAATTGAAGTCCACCT
TTAAGGAGACCTTGCTATCCAGTCCGGCTCTAGATTGGATCGAGCCATCC
ACTCGAAGTCTTGCCATCGCTAAGCTGGAGGCTATGACCCTGGAGGTCAA
CAACTACGTTAAGGAGAACTTTACCGAGGAATTTGCGGACCTCAATTTGC
AAAACACGGACTGCGTAGAGAATTTGCGACAGGTTCAGATGCTGCAAGCA
AAGCAAATGCGGCAATTGTATCACCAACCGGCTAAGCCACTGGAAGCGGG
CGAACTTTTGAGCTATACCCCAAGCAACATCCTGCTGGAGAACAGCATTA
AGGTTCCGGTGGCCCTGCTACAACCCTTCTACATTTGGTCCGATGTCTAC
CCCAATGCGGTTATGTTCGGAACCCTGGCCTACCTAATTGGACACGAGTT
AATCCACGGATTCGACGACAGCGGACGGAAGTTTGACGAGAAGGGGAACT
CAAAGGATTGGTGGGATGAGAAGTCCAGCAGCAACTTCCTAAAACGACGG
GATTGCTTCACCAAGCAGTATGGCAGGTATGTCTACGATGGCATTCAGTT
GAAGGAGTCAACCGCGCAGTCGGAGAACATTGCGGACAACGGCGGAATGC
GACTGGCCTACACCGCCTACCGGAAATGGTACGAAAACCAGTTGACACTT
CCTAATGGGGCTCAGGATATGACCAAGGAGACCCTGCCCAACCTGCGATA
CACCGCCAAACAACTATTCTTCATTAGCTTTGCTCAGAGCTGGTGCAACG
ATGTACATCCCAAGGTGAAGGCCCTTCAGGTGTCAACCGACGACCACATG
CCAGGAAAGTTCCGCGTTATTGGAACTTTATCTAACTTTGAGGAGTTTTC
AAAGGAGTTCAACTGTCACGCCGGATCCGCCATGAATCCCATCGAAAAAT
GCATACTTTACTAGAGTATATAATAAAAAAAAAACTAAGCAGTTGTTAAC
TATTAAAAAAAAAAAAAAAAA

MIP25937.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24703782..24705935 1..2154 10605 99.5 Plus
chr3R 27901430 chr3R 24706716..24708806 24..2114 5175 83.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28880792..28882945 1..2154 10770 100 Plus
3R 32079331 3R 28883726..28885816 24..2114 5160 83.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28621623..28623776 1..2154 10770 100 Plus
3R 31820162 3R 28626008..28626647 1475..2114 2645 94.2 Plus
3R 31820162 3R 28624557..28625073 24..540 1775 89.5 Plus
3R 31820162 3R 28625608..28625912 1075..1379 655 80.9 Plus
3R 31820162 3R 28625401..28625570 868..1037 460 84.7 Plus
3R 31820162 3R 28625142..28625330 609..797 240 75.1 Plus
Blast to na_te.dros performed on 2019-03-17 01:12:23 has no hits.

MIP25937.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:13:17 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24703782..24705935 1..2154 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-12-01 08:46:00 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:44:32 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:32:10 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:51:45 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 08:45:59 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:44:32 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2103 12..2114 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:32:10 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2154 1..2154 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:51:45 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
CG14527-RA 1..2154 1..2154 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:17 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28880792..28882945 1..2154 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:17 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28880792..28882945 1..2154 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:13:17 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28880792..28882945 1..2154 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:32:10 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24706514..24708667 1..2154 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:51:44 Download gff for MIP25937.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28621623..28623776 1..2154 100   Plus

MIP25937.pep Sequence

Translation from 2 to 2113

> MIP25937.pep
KRHMTMKLFCIWIASHVLSVLVLAAPTSEDVLNQDTPYMKELMRQAKAAE
IESFMNQKVDPCKDFYAFSCGNYKRINSALNMRVLTTGVFETLTKGLNRK
ILKMLNTPHDSHDTPEDIQVKHFYESCLQIKELNSTYSEKLKRLIAEFGT
MPLLEGSSWQEDDFDWLNTTARMAHRYGIMSIIGVGVATDFANNQKNIIY
INQQEFPLKTRSMYMDNETAIYRQNYQNNIQLILEKYLGVKDELARKAAK
EMFEFEVDLAHGLVDNNKHLNLRDLIELLTVAELRERYAPTLDTDQLIFV
SMGEKISDKVYEYNRRYQQNLVEVIERTPKSTVANYLFLRLIWEFIQKPS
GVAEKPTEACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMWHQLKSTF
KETLLSSPALDWIEPSTRSLAIAKLEAMTLEVNNYVKENFTEEFADLNLQ
NTDCVENLRQVQMLQAKQMRQLYHQPAKPLEAGELLSYTPSNILLENSIK
VPVALLQPFYIWSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNS
KDWWDEKSSSNFLKRRDCFTKQYGRYVYDGIQLKESTAQSENIADNGGMR
LAYTAYRKWYENQLTLPNGAQDMTKETLPNLRYTAKQLFFISFAQSWCND
VHPKVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKC
ILY*

MIP25937.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17017-PA 691 GF17017-PA 4..691 8..703 2468 62.8 Plus
Dana\GF17991-PA 681 GF17991-PA 10..681 17..703 1151 35.6 Plus
Dana\GF17990-PA 686 GF17990-PA 40..686 40..703 960 31.8 Plus
Dana\GF17983-PA 674 GF17983-PA 14..669 8..703 937 32.5 Plus
Dana\GF18283-PA 691 GF18283-PA 35..691 38..703 842 31.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11623-PA 699 GG11623-PA 1..699 6..703 2885 74.4 Plus
Dere\GG11622-PA 699 GG11622-PA 1..699 6..703 2818 73.2 Plus
Dere\GG11619-PA 683 GG11619-PA 2..682 4..703 1224 37 Plus
Dere\GG11618-PA 681 GG11618-PA 32..681 36..703 921 31.2 Plus
Dere\GG12480-PA 686 GG12480-PA 32..686 38..703 789 29.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13212-PA 692 GH13212-PA 3..692 17..703 2068 53.6 Plus
Dgri\GH13201-PA 693 GH13201-PA 19..693 6..703 1275 37.6 Plus
Dgri\GH20297-PA 603 GH20297-PA 317..603 417..703 1028 63.1 Plus
Dgri\GH13190-PA 684 GH13190-PA 32..684 32..703 1022 32 Plus
Dgri\GH18312-PA 682 GH18312-PA 27..682 38..703 825 31 Plus
Dgri\GH20297-PA 603 GH20297-PA 3..322 17..333 812 45 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
Nepl20-PA 700 CG14527-PA 1..700 4..703 3673 100 Plus
Nepl21-PC 707 CG14526-PC 6..707 2..703 3023 80.2 Plus
Nepl18-PA 682 CG14528-PA 7..682 11..703 1183 35.9 Plus
Nepl17-PA 681 CG14529-PA 32..681 36..703 969 31.5 Plus
Nepl19-PA 671 CG14523-PA 47..666 33..703 870 31.2 Plus
Nepl15-PA 686 CG4721-PA 1..686 13..703 796 29.1 Plus
Nep4-PC 978 CG4058-PC 364..978 103..703 733 30.5 Plus
Nep4-PB 978 CG4058-PB 364..978 103..703 733 30.5 Plus
Nep4-PA 1040 CG4058-PA 426..1040 103..703 733 30.5 Plus
Nep1-PD 849 CG5905-PD 182..849 48..703 684 26.5 Plus
Nep1-PC 849 CG5905-PC 182..849 48..703 684 26.5 Plus
Nep1-PA 849 CG5905-PA 182..849 48..703 684 26.5 Plus
Nep1-PB 849 CG5905-PB 182..849 48..703 684 26.5 Plus
Nep2-PC 763 CG9761-PC 100..760 55..700 668 26.8 Plus
Nep2-PA 763 CG9761-PA 100..760 55..700 668 26.8 Plus
Nep2-PB 774 CG9761-PB 100..771 55..700 648 26.4 Plus
Nep3-PC 786 CG9565-PC 112..783 48..700 638 28.4 Plus
Nep3-PB 786 CG9565-PB 112..783 48..700 638 28.4 Plus
Nep3-PA 786 CG9565-PA 112..783 48..700 638 28.4 Plus
Nep7-PA 717 CG5527-PA 52..717 45..703 562 26.7 Plus
Nepl14-PA 696 CG4723-PA 41..696 40..703 540 25.2 Plus
Nep5-PD 882 CG6265-PD 133..882 40..703 507 25.5 Plus
Nepl13-PA 741 CG4725-PA 49..741 40..703 504 23.5 Plus
Nepl12-PA 702 CG8358-PA 50..694 41..696 481 25 Plus
Nepl7-PB 669 CG15485-PB 46..669 53..703 474 25 Plus
Nepl7-PA 669 CG15485-PA 46..669 53..703 474 25 Plus
Nepl5-PA 684 CG9507-PA 32..684 43..703 319 22.8 Plus
Nep6-PB 655 CG3775-PB 31..655 50..703 306 24 Plus
Nep6-PA 655 CG3775-PA 31..655 50..703 306 24 Plus
Nepl6-PA 655 CG9508-PA 1..655 11..703 228 21.8 Plus
frma-PG 611 CG3239-PG 252..599 336..688 211 22.6 Plus
frma-PF 611 CG3239-PF 252..599 336..688 211 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22369-PA 700 GI22369-PA 33..700 35..703 2049 55.3 Plus
Dmoj\GI22368-PA 688 GI22368-PA 6..688 12..703 1244 36.2 Plus
Dmoj\GI22367-PA 692 GI22367-PA 37..692 32..703 1082 31.8 Plus
Dmoj\GI10381-PA 675 GI10381-PA 45..674 35..703 927 32.9 Plus
Dmoj\GI10776-PA 685 GI10776-PA 30..685 38..703 893 31.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24195-PA 709 GL24195-PA 4..709 8..703 2411 61.5 Plus
Dper\GL13855-PA 689 GL13855-PA 31..689 36..703 935 30.9 Plus
Dper\GL23771-PA 685 GL23771-PA 26..685 36..703 827 30.5 Plus
Dper\GL27139-PA 1049 GL27139-PA 452..1049 118..703 744 30.6 Plus
Dper\GL21487-PA 768 GL21487-PA 105..768 55..703 679 26.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13054-PA 709 GA13054-PA 4..709 8..703 2401 61.3 Plus
Dpse\GA26947-PA 666 GA26947-PA 6..666 22..703 1154 35.3 Plus
Dpse\GA26946-PA 689 GA26946-PA 31..689 36..703 928 30.8 Plus
Dpse\GA13053-PA 679 GA13053-PA 28..674 15..703 904 33.2 Plus
Dpse\GA18384-PA 682 GA18384-PA 23..682 36..703 840 30.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12743-PA 700 GM12743-PA 1..700 4..703 3491 91.1 Plus
Dsec\GM12744-PA 698 GM12744-PA 1..698 6..703 3060 78.8 Plus
Dsec\GM12742-PA 682 GM12742-PA 2..682 4..703 1178 35.6 Plus
Dsec\GM23611-PA 686 GM23611-PA 32..686 38..703 798 29.6 Plus
Dsec\GM23172-PA 1040 GM23172-PA 437..1040 108..703 726 30.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21387-PA 685 GD21387-PA 1..685 21..703 3006 79.4 Plus
Dsim\GD21386-PA 1052 GD21386-PA 1..342 4..345 1659 88.3 Plus
Dsim\GD21386-PA 1052 GD21386-PA 841..1052 492..703 1133 92.9 Plus
Dsim\GD21385-PA 598 GD21385-PA 2..598 87..703 1060 35.6 Plus
Dsim\GD18009-PA 671 GD18009-PA 49..666 35..703 897 32 Plus
Dsim\GD18421-PA 686 GD18421-PA 32..686 38..703 801 29.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:49:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24403-PA 710 GJ24403-PA 27..710 24..703 2146 56.3 Plus
Dvir\GJ24402-PA 670 GJ24402-PA 22..670 36..703 1281 38.2 Plus
Dvir\GJ24401-PA 687 GJ24401-PA 32..687 32..703 1101 32.3 Plus
Dvir\GJ14375-PA 685 GJ14375-PA 30..685 38..703 880 31.3 Plus
Dvir\GJ24287-PA 1056 GJ24287-PA 449..1056 103..703 748 30.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22544-PA 686 GK22544-PA 10..686 28..703 2139 56.6 Plus
Dwil\GK22548-PA 651 GK22548-PA 1..651 39..703 1501 44.8 Plus
Dwil\GK22543-PA 681 GK22543-PA 11..681 20..703 1259 37.2 Plus
Dwil\GK22542-PA 685 GK22542-PA 38..685 36..703 972 32.9 Plus
Dwil\GK11619-PA 688 GK11619-PA 29..688 38..703 883 31.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23808-PA 1025 GE23808-PA 343..1025 22..703 2776 72.5 Plus
Dyak\GE19949-PA 697 GE19949-PA 1..697 6..703 2668 69.5 Plus
Dyak\GE23808-PA 1025 GE23808-PA 1..339 6..346 1383 74.5 Plus
Dyak\GE23807-PA 682 GE23807-PA 2..682 4..703 1205 35.5 Plus
Dyak\GE23806-PA 681 GE23806-PA 32..681 36..703 899 30.9 Plus
Dyak\GE24002-PA 686 GE24002-PA 32..686 38..703 819 30.1 Plus

MIP25937.hyp Sequence

Translation from 2 to 2113

> MIP25937.hyp
KRHMTMKLFCIWIASHVLSVLVLAAPTSEDVLNQDTPYMKELMRQAKAAE
IESFMNQKVDPCKDFYAFSCGNYKRINSALNMRVLTTGVFETLTKGLNRK
ILKMLNTPHDSHDTPEDIQVKHFYESCLQIKELNSTYSEKLKRLIAEFGT
MPLLEGSSWQEDDFDWLNTTARMAHRYGIMSIIGVGVATDFANNQKNIIY
INQQEFPLKTRSMYMDNETAIYRQNYQNNIQLILEKYLGVKDELARKAAK
EMFEFEVDLAHGLVDNNKHLNLRDLIELLTVAELRERYAPTLDTDQLIFV
SMGEKISDKVYEYNRRYQQNLVEVIERTPKSTVANYLFLRLIWEFIQKPS
GVAEKPTEACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMWHQLKSTF
KETLLSSPALDWIEPSTRSLAIAKLEAMTLEVNNYVKENFTEEFADLNLQ
NTDCVENLRQVQMLQAKQMRQLYHQPAKPLEAGELLSYTPSNILLENSIK
VPVALLQPFYIWSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNS
KDWWDEKSSSNFLKRRDCFTKQYGRYVYDGIQLKESTAQSENIADNGGMR
LAYTAYRKWYENQLTLPNGAQDMTKETLPNLRYTAKQLFFISFAQSWCND
VHPKVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKC
ILY*

MIP25937.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14527-PA 700 CG14527-PA 1..700 4..703 3673 100 Plus
CG14526-PC 707 CG14526-PC 6..707 2..703 3023 80.2 Plus
CG14528-PA 682 CG14528-PA 7..682 11..703 1183 35.9 Plus
CG14529-PA 681 CG14529-PA 32..681 36..703 969 31.5 Plus
CG14523-PA 671 CG14523-PA 47..666 33..703 870 31.2 Plus