Clone MIP26121 Report

Search the DGRC for MIP26121

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:261
Well:21
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG16956-RA
Protein status:MIP26121.pep: gold
Sequenced Size:769

Clone Sequence Records

MIP26121.complete Sequence

769 bp assembled on 2011-03-18

GenBank Submission: BT126173.1

> MIP26121.complete
AGTCAGCGAAAATTGGCAAAATGTGGAACAAACCGTATATGGGAATAATA
ATTTTGTGTATGCTAGCCAGCGGTGGAAGAGCCGTACCCACCGATTTGGC
CAGATACTCTCAGTTGGGACAAGTACCGTTGACGGCAGCCAACAACAGCG
TGGTGTCCACCACTGATCATTTGGGTCTCCTGCAGGAGACGTCCTCGGTA
GCTCCTGACTTCGAATACTCACTACTGGGCGAGGATCCGCAGGATCAGCA
ATGGTTTCGCGTCAGTCTTACTCCGAAAACCAACAAAACTGGCTACCGCG
CACAGTTTGCCACTCGAAAACATCCGCCCTTTAATTCGCAAGTGGCCCAC
CGGCATGATAAAACTATTCAGGATCTGCTTAACTGGCTGGACCGTTCCGA
GGATCAGAGTTTGTGGAAAGTTTATCGTGATCTCTTGGAGTACACACCAC
AGGCACAGTCATCCAGCCAGGAGTATCCTAATGGCAACGTAATCGAAAAA
GCGAAGAAGTCGTCCCAGAAGCAGAAATGTCATAGGCGCAATCACCGACT
GCTCCTGGTGGATGAAGATGGAACCAGTACCACGACATCATTACCACCAA
GTAAGGACCAAACGCAACCGACACATGAGTTGGTTTATTTCATAAGGGAG
CCTAAGTAAGCCCAAAGAAATAGCAGTTCTAAAGACGTAATATTCGGGTT
TATAATATTTATTAATACATTATAAAGACAAGTTTACAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

MIP26121.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:38:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13412444..13413063 737..118 3055 99.5 Minus
chr2L 23010047 chr2L 13413119..13413236 118..1 590 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13413774..13414402 746..118 3115 99.7 Minus
2L 23513712 2L 13414458..13414575 118..1 590 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13413774..13414402 746..118 3115 99.6 Minus
2L 23513712 2L 13414458..13414575 118..1 590 100 Minus
Blast to na_te.dros performed on 2019-03-16 22:38:27 has no hits.

MIP26121.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:39:28 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13412487..13413062 119..694 99 <- Minus
chr2L 13413119..13413236 1..118 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-22 17:53:34 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..600 60..659 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:58:30 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..600 60..659 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:30:45 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..600 60..659 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-22 17:53:33 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..600 60..659 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:58:30 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..737 1..737 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:30:45 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
CG16956-RA 1..737 1..737 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:28 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13413783..13414401 119..737 100 <- Minus
2L 13414458..13414575 1..118 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:28 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13413783..13414401 119..737 100 <- Minus
2L 13414458..13414575 1..118 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:39:28 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13413783..13414401 119..737 100 <- Minus
2L 13414458..13414575 1..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:58:30 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13413783..13414401 119..737 100 <- Minus
arm_2L 13414458..13414575 1..118 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:02:36 Download gff for MIP26121.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13413783..13414401 119..737 100 <- Minus
2L 13414458..13414575 1..118 100   Minus

MIP26121.pep Sequence

Translation from 2 to 658

> MIP26121.pep
SAKIGKMWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSV
VSTTDHLGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRA
QFATRKHPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQ
AQSSSQEYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPS
KDQTQPTHELVYFIREPK*

MIP26121.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21647-PA 208 GF21647-PA 1..205 7..215 625 55 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10198-PA 199 GG10198-PA 1..199 20..218 880 87.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11096-PA 221 GH11096-PA 9..218 16..215 364 40.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-PA 199 CG16956-PA 1..199 20..218 1047 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18219-PA 232 GI18219-PA 1..229 7..215 343 39.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25705-PA 204 GL25705-PA 1..201 7..215 513 47.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25402-PA 204 GA25402-PA 1..201 7..215 514 46.9 Plus
Dpse\GA14235-PA 204 GA14235-PA 1..201 7..215 512 46.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25521-PA 212 GM25521-PA 1..212 7..218 1032 92.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:27:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22058-PA 199 GD22058-PA 1..199 20..218 950 92.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:27:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18126-PA 214 GJ18126-PA 1..211 7..215 384 43.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11591-PA 198 GE11591-PA 1..198 21..218 884 88.4 Plus

MIP26121.hyp Sequence

Translation from 2 to 658

> MIP26121.hyp
SAKIGKMWNKPYMGIIILCMLASGGRAVPTDLARYSQLGQVPLTAANNSV
VSTTDHLGLLQETSSVAPDFEYSLLGEDPQDQQWFRVSLTPKTNKTGYRA
QFATRKHPPFNSQVAHRHDKTIQDLLNWLDRSEDQSLWKVYRDLLEYTPQ
AQSSSQEYPNGNVIEKAKKSSQKQKCHRRNHRLLLVDEDGTSTTTSLPPS
KDQTQPTHELVYFIREPK*

MIP26121.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG16956-PA 199 CG16956-PA 1..199 20..218 1047 100 Plus