Clone Sequence Records
MIP26334.complete Sequence
876 bp assembled on 2010-08-20
GenBank Submission: BT125592.1
> MIP26334.complete
ATTACGATTGAGGACGACGACCAGTTAGTTCTATACCATATAGCTCTATA
ATCGGCAAATTGTGTTTTCCGTTACTTAAATAATCAAGACTGCGCCAAGT
CATAATGAAGCCAATAATGGAAACGAATATACAGGCATCCATTTGGAACA
AGAGATTCGAATCGACGATGATGAGTTCTTCCGAGCAAAGTTTTGCCAAG
TCCAATGGGACTAAAAAGAAGACTGTGACCTATTCACGTTTCATCCGCAC
CGAACGTGTCGCAGACGGACCGACCAATGCGGTGCAAAAGAAGACTGTGT
TCTTTTCGCGATTCGACCGCACCGCTCGCGCCGAAGAGGACCTAACCCGT
CAATTGGCCAGCGTGTCCTTAAAACCAAAACAGCCTGTGGCTTCCACCTC
GAATGAGCAGTTTTTTGCCAGCAACCTGCATTACTATCCCCATCTGCCCC
AGCCAACTGCGGTGGGCCACTACCAGACCTATGCCGAAATCAAGAGCCTC
TGGTTGAAGGGTCATTTCTCCCAAGCTTGTAACCCCACCTCGCGGTCGAT
GCAACCGCCTCGTCGTATTTCTATCACCAACGAGTTCCCGGATGATCAAC
CGAAGCCAGCTCCCAAACGCCGCTACTCGCTTGTCCGCCGCAACTCGATT
AACCTCCCAATTGGGTCCAATTTTGCTATGCCCGTGCTGATGGAGGAGGA
GAAGGAGGAGGATGAAGTGAAGGATCTAAATGAGAACAGCGGCTCCACCA
AGCCAGCTACATCGACCTCGAAAGGCGCAATCCCGAAGCAGCCCAAGAAG
TTCGCCTTAACCTTCTAGAAATGCTGTGACTAATAAATCTACCTAACTGA
AAAAAAAAAAAAAAAAAAAAAAAAAA
MIP26334.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:27:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrX | 22417052 | chrX | 1715340..1716043 | 849..146 | 3490 | 99.7 | Minus |
| chrX | 22417052 | chrX | 1716107..1716252 | 146..1 | 700 | 98.6 | Minus |
| chrX | 22417052 | chrX | 1713762..1713990 | 374..146 | 605 | 84.3 | Minus |
| chrX | 22417052 | chrX | 1713589..1713751 | 712..550 | 515 | 87.7 | Minus |
| chrX | 22417052 | chrX | 1714056..1714200 | 144..1 | 495 | 91 | Minus |
| chrX | 22417052 | chrX | 1713383..1713529 | 849..703 | 435 | 86.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:27:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1821469..1822172 | 849..146 | 3520 | 100 | Minus |
| X | 23542271 | X | 1822236..1822381 | 146..1 | 715 | 99.3 | Minus |
| X | 23542271 | X | 1819891..1820119 | 374..146 | 605 | 84.3 | Minus |
| X | 23542271 | X | 1819718..1819880 | 712..550 | 530 | 88.3 | Minus |
| X | 23542271 | X | 1820185..1820329 | 144..1 | 465 | 89.7 | Minus |
| X | 23542271 | X | 1819511..1819658 | 850..703 | 440 | 86.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23527363 | X | 1829567..1830270 | 849..146 | 3520 | 100 | Minus |
| X | 23527363 | X | 1830334..1830479 | 146..1 | 715 | 99.3 | Minus |
| X | 23527363 | X | 1827989..1828217 | 374..146 | 605 | 84.2 | Minus |
| X | 23527363 | X | 1827816..1827978 | 712..550 | 530 | 88.3 | Minus |
| X | 23527363 | X | 1828283..1828427 | 144..1 | 475 | 89.6 | Minus |
| X | 23527363 | X | 1827609..1827756 | 850..703 | 440 | 86.4 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:27:51 has no hits.
MIP26334.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:28:50 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrX | 1715340..1716042 | 147..849 | 95 | <- | Minus |
| chrX | 1716107..1716252 | 1..146 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-08-20 16:07:01 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RA | 1..651 | 168..818 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:39:48 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RA | 1..651 | 168..818 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:36:43 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 1..714 | 105..818 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:10:09 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 1..714 | 105..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-20 16:07:01 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RA | 1..651 | 168..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:39:48 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RA | 1..651 | 168..818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:36:43 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 1..849 | 1..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:10:09 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14811-RB | 1..849 | 1..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:28:50 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1822236..1822381 | 1..146 | 99 | | Minus |
| X | 1821469..1822171 | 147..849 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:28:50 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1822236..1822381 | 1..146 | 99 | | Minus |
| X | 1821469..1822171 | 147..849 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:28:50 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1822236..1822381 | 1..146 | 99 | | Minus |
| X | 1821469..1822171 | 147..849 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:36:43 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1715502..1716204 | 147..849 | 100 | <- | Minus |
| arm_X | 1716269..1716414 | 1..146 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:42:59 Download gff for
MIP26334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1829567..1830269 | 147..849 | 100 | <- | Minus |
| X | 1830334..1830479 | 1..146 | 99 | | Minus |
MIP26334.pep Sequence
Translation from 104 to 817
> MIP26334.pep
MKPIMETNIQASIWNKRFESTMMSSSEQSFAKSNGTKKKTVTYSRFIRTE
RVADGPTNAVQKKTVFFSRFDRTARAEEDLTRQLASVSLKPKQPVASTSN
EQFFASNLHYYPHLPQPTAVGHYQTYAEIKSLWLKGHFSQACNPTSRSMQ
PPRRISITNEFPDDQPKPAPKRRYSLVRRNSINLPIGSNFAMPVLMEEEK
EEDEVKDLNENSGSTKPATSTSKGAIPKQPKKFALTF*
MIP26334.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF21079-PA | 386 | GF21079-PA | 105..159 | 99..153 | 147 | 56.4 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG12681-PA | 227 | GG12681-PA | 1..222 | 1..237 | 478 | 47.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14811-PB | 237 | CG14811-PB | 1..237 | 1..237 | 1228 | 100 | Plus |
| CG14810-PB | 201 | CG14810-PB | 1..201 | 5..237 | 499 | 48.4 | Plus |
| CG14810-PA | 202 | CG14810-PA | 1..202 | 5..237 | 487 | 48.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM18953-PA | 479 | GM18953-PA | 108..278 | 10..196 | 433 | 56.4 | Plus |
| Dsec\GM18953-PA | 479 | GM18953-PA | 1..109 | 1..117 | 380 | 69.2 | Plus |
| Dsec\GM18953-PA | 479 | GM18953-PA | 302..479 | 15..237 | 337 | 45 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD16412-PA | 225 | GD16412-PA | 1..225 | 1..237 | 835 | 72.6 | Plus |
| Dsim\GD16413-PA | 177 | GD16413-PA | 1..177 | 1..237 | 363 | 44.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE16510-PA | 241 | GE16510-PA | 1..236 | 1..237 | 504 | 47.4 | Plus |
MIP26334.hyp Sequence
Translation from 104 to 817
> MIP26334.hyp
MKPIMETNIQASIWNKRFESTMMSSSEQSFAKSNGTKKKTVTYSRFIRTE
RVADGPTNAVQKKTVFFSRFDRTARAEEDLTRQLASVSLKPKQPVASTSN
EQFFASNLHYYPHLPQPTAVGHYQTYAEIKSLWLKGHFSQACNPTSRSMQ
PPRRISITNEFPDDQPKPAPKRRYSLVRRNSINLPIGSNFAMPVLMEEEK
EEDEVKDLNENSGSTKPATSTSKGAIPKQPKKFALTF*
MIP26334.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14811-PB | 237 | CG14811-PB | 1..237 | 1..237 | 1228 | 100 | Plus |
| CG14810-PB | 201 | CG14810-PB | 1..201 | 5..237 | 499 | 48.4 | Plus |
| CG14810-PA | 202 | CG14810-PA | 1..202 | 5..237 | 487 | 48.2 | Plus |
