Clone MIP26555 Report

Search the DGRC for MIP26555

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:265
Well:55
Vector:pOT2
Associated Gene/TranscriptCG5958-RA
Protein status:MIP26555.pep: gold
Sequenced Size:1167

Clone Sequence Records

MIP26555.complete Sequence

1167 bp assembled on 2011-07-22

GenBank Submission: BT128762.1

> MIP26555.complete
TTCAGTTGACTCGAATCGCACGAGTCGCGAGGAAGCAAAACTAAAGAACG
CTGAAAAACCCTCAATAAGTGAAAATCGTTTGACTTCGCCTTAGGCCCCG
ACACATAAAAACAAAAACCAAGCGACATAATGGCTGCCACCGATATCGCC
GAGGAGGCCTTTCACTTGCGCCTGGGCTATCTGAAGCCGGAGACCGTGGA
AATCGCCCGTGTGGAACTCCGCGAAACCGAAGAAGTCAAGGCGGAGGCCA
TCATCAAGCTACGGGAACTGCTCAAGGCCACGCCCGAGCTGAACTACAAG
GATGACGACGCTTTCCTCACAGTTTTCCTGCGCGCCTGCCACTTTTATCC
CGAAGGAGCTCTGGAAAAGATGAAAACCACAGCCAGCTTCCGCAAGGAGT
ACGCCTCTCTGGTCCGCGGACTCCTGGTCGAGCAGGTTAAGGAGAAATTC
GTGAAGGGCAGTGTGATCAATGTGCTCAAGAACTGCGACCAGAAGGGTCG
TCGTGTGCTCATCGTGAACTGTGGCAAACTCTGGGATCCCAGCGATATTA
CCAGCGATGAGATGTTCCGCATGCTCTACATGGTACATCTCGCCGCCCAG
CTGGAGGAGGAGACCCAGGTGCGGGGCGTGGTCTGCATCATGGACTTCGA
GGGACTGTCGATGAAACAGGTGAAGGCCCTGTCGCCGAGCTTCTCCAAGC
GATTGCTCACATTCATCCAGGAGGCGATGCCCCTTCGCATGAAGGAGGTG
CACTTCGTGAAGCAGCCGTTCATCTTCAACATGGTTTGGTCGCTCTTCAA
GCCCTTCGTCAAACAAAAGCTGAACAATAGGATGCACTTCCACGGCAGTG
ACATGAAGTCGTTGCAGAAGTTCCTCGACCCCTCCGTCCTGCCCGCCAAC
TACAAGGGTACTCTGCCCGCGATCGACTACGGTGGCGTCGAGTGGTTCCC
CGCTCTGGAGCAGCAGGCCCAGTATGTGGAGGAGTGGAGCCAGCTTGGCC
CTGCCCAGTGGTGATTGGCCCCATTTCAATACTACACTGACATTCGCATC
CTACATTGACATTAGCTTAACTTTATGCTTGTAAATACTTTCAATATGTG
TTTGCTTAGTTCGTAACATTTTGGCAATAAACTAGTTACATAATACTATA
AAAAAAAAAAAAAAAAA

MIP26555.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:47:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7430098..7430561 831..368 2290 99.6 Minus
chr2L 23010047 chr2L 7429557..7429875 1149..831 1595 100 Minus
chr2L 23010047 chr2L 7431970..7432246 369..93 1385 100 Minus
chr2L 23010047 chr2L 7432438..7432532 95..1 475 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:47:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7431079..7431542 831..368 2320 100 Minus
2L 23513712 2L 7430535..7430856 1152..831 1610 100 Minus
2L 23513712 2L 7432937..7433213 369..93 1385 100 Minus
2L 23513712 2L 7433405..7433499 95..1 475 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7431079..7431542 831..368 2320 100 Minus
2L 23513712 2L 7430535..7430856 1152..831 1610 100 Minus
2L 23513712 2L 7432937..7433213 369..93 1385 100 Minus
2L 23513712 2L 7433405..7433499 95..1 475 100 Minus
Blast to na_te.dros performed on 2019-03-15 10:47:44 has no hits.

MIP26555.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:48:25 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7429557..7429874 832..1149 100 <- Minus
chr2L 7430098..7430559 370..831 99 <- Minus
chr2L 7431970..7432244 95..369 100 <- Minus
chr2L 7432439..7432532 1..94 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-07-22 12:42:44 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 1..885 130..1014 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:26:05 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 1..885 130..1014 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:12:45 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 1..885 130..1014 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-22 12:42:43 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 1..1130 20..1149 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:26:05 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 18..1166 1..1149 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:45 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG5958-RA 18..1166 1..1149 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:25 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7430538..7430855 832..1149 100 <- Minus
2L 7431079..7431540 370..831 100 <- Minus
2L 7432937..7433211 95..369 100 <- Minus
2L 7433406..7433499 1..94 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:25 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7430538..7430855 832..1149 100 <- Minus
2L 7431079..7431540 370..831 100 <- Minus
2L 7432937..7433211 95..369 100 <- Minus
2L 7433406..7433499 1..94 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:25 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7430538..7430855 832..1149 100 <- Minus
2L 7431079..7431540 370..831 100 <- Minus
2L 7432937..7433211 95..369 100 <- Minus
2L 7433406..7433499 1..94 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:26:05 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7430538..7430855 832..1149 100 <- Minus
arm_2L 7431079..7431540 370..831 100 <- Minus
arm_2L 7432937..7433211 95..369 100 <- Minus
arm_2L 7433406..7433499 1..94 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:09:30 Download gff for MIP26555.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7430538..7430855 832..1149 100 <- Minus
2L 7431079..7431540 370..831 100 <- Minus
2L 7432937..7433211 95..369 100 <- Minus
2L 7433406..7433499 1..94 100   Minus

MIP26555.hyp Sequence

Translation from 129 to 1013

> MIP26555.hyp
MAATDIAEEAFHLRLGYLKPETVEIARVELRETEEVKAEAIIKLRELLKA
TPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRKEYASLVRGLLV
EQVKEKFVKGSVINVLKNCDQKGRRVLIVNCGKLWDPSDITSDEMFRMLY
MVHLAAQLEEETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTFIQEAM
PLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLD
PSVLPANYKGTLPAIDYGGVEWFPALEQQAQYVEEWSQLGPAQW*

MIP26555.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG5958-PA 294 CG5958-PA 1..294 1..294 1523 100 Plus
CG10237-PD 301 CG10237-PD 13..283 6..276 489 38.2 Plus
CG10237-PA 301 CG10237-PA 13..283 6..276 489 38.2 Plus
CG10237-PE 306 CG10237-PE 18..288 6..276 489 38.2 Plus
CG10237-PC 306 CG10237-PC 18..288 6..276 489 38.2 Plus

MIP26555.pep Sequence

Translation from 129 to 1013

> MIP26555.pep
MAATDIAEEAFHLRLGYLKPETVEIARVELRETEEVKAEAIIKLRELLKA
TPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRKEYASLVRGLLV
EQVKEKFVKGSVINVLKNCDQKGRRVLIVNCGKLWDPSDITSDEMFRMLY
MVHLAAQLEEETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTFIQEAM
PLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLD
PSVLPANYKGTLPAIDYGGVEWFPALEQQAQYVEEWSQLGPAQW*

MIP26555.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14025-PA 294 GF14025-PA 1..294 1..294 1462 91.2 Plus
Dana\GF15843-PA 306 GF15843-PA 18..288 6..276 501 39 Plus
Dana\GF15861-PA 311 GF15861-PA 39..273 26..261 500 39 Plus
Dana\GF14236-PA 290 GF14236-PA 16..273 20..280 339 30.6 Plus
Dana\GF24441-PA 310 GF24441-PA 7..281 18..290 271 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23533-PA 294 GG23533-PA 1..294 1..294 1555 98.6 Plus
Dere\GG21633-PA 329 GG21633-PA 41..308 6..273 486 38.3 Plus
Dere\GG10481-PA 311 GG10481-PA 39..273 26..261 484 38.6 Plus
Dere\GG21183-PA 292 GG21183-PA 16..273 20..280 328 30.2 Plus
Dere\GG14766-PA 324 GG14766-PA 21..265 18..260 294 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13145-PA 294 GH13145-PA 1..294 1..294 1376 85.4 Plus
Dgri\GH13468-PA 301 GH13468-PA 13..283 6..276 494 38.2 Plus
Dgri\GH13736-PA 312 GH13736-PA 39..273 26..261 477 38.1 Plus
Dgri\GH11102-PA 290 GH11102-PA 16..286 20..290 343 29.9 Plus
Dgri\GH16061-PA 335 GH16061-PA 32..291 18..279 266 30.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5958-PA 294 CG5958-PA 1..294 1..294 1523 100 Plus
CG10237-PD 301 CG10237-PD 13..283 6..276 489 38.2 Plus
CG10237-PA 301 CG10237-PA 13..283 6..276 489 38.2 Plus
CG10237-PE 306 CG10237-PE 18..288 6..276 489 38.2 Plus
CG10237-PC 306 CG10237-PC 18..288 6..276 489 38.2 Plus
CG10237-PB 324 CG10237-PB 36..306 6..276 489 38.2 Plus
CG5973-PF 311 CG5973-PF 39..273 26..261 466 37.7 Plus
CG5973-PE 311 CG5973-PE 39..273 26..261 466 37.7 Plus
CG5973-PG 311 CG5973-PG 39..273 26..261 466 37.7 Plus
CG5973-PD 311 CG5973-PD 39..273 26..261 466 37.7 Plus
CG5973-PC 311 CG5973-PC 39..273 26..261 466 37.7 Plus
CG5973-PB 311 CG5973-PB 39..273 26..261 466 37.7 Plus
CG5973-PA 311 CG5973-PA 39..273 26..261 466 37.7 Plus
CG10026-PD 290 CG10026-PD 16..272 20..279 311 29.9 Plus
CG10026-PC 290 CG10026-PC 16..272 20..279 311 29.9 Plus
CG10026-PA 290 CG10026-PA 16..272 20..279 311 29.9 Plus
CG10026-PB 299 CG10026-PB 25..281 20..279 311 29.9 Plus
CG33966-PA 310 CG33966-PA 7..281 18..290 291 27.5 Plus
CG33514-PA 311 CG33514-PA 8..252 18..260 265 28.5 Plus
CG10657-PA 334 CG10657-PA 31..279 18..266 256 30.2 Plus
Cralbp-PA 324 CG10546-PA 16..256 23..263 230 27 Plus
CG2663-PC 308 CG2663-PC 15..274 27..285 225 28.3 Plus
CG2663-PA 308 CG2663-PA 15..274 27..285 225 28.3 Plus
CG31636-PB 313 CG31636-PB 13..252 24..261 212 28.9 Plus
CG31636-PA 313 CG31636-PA 13..252 24..261 212 28.9 Plus
CG30339-PA 308 CG30339-PA 7..279 18..290 208 26.9 Plus
CG12926-PA 313 CG12926-PA 3..284 9..290 204 25 Plus
CG10300-PA 311 CG10300-PA 8..264 18..288 196 22 Plus
CG1902-PC 312 CG1902-PC 7..247 18..260 188 24.9 Plus
CG1902-PA 312 CG1902-PA 7..247 18..260 188 24.9 Plus
CG11550-PA 298 CG11550-PA 15..240 35..262 173 24 Plus
CG31826-PC 268 CG31826-PC 12..268 38..292 171 22.7 Plus
CG31826-PB 268 CG31826-PB 12..268 38..292 171 22.7 Plus
CG33965-PA 317 CG33965-PA 12..257 18..261 167 26.2 Plus
CG3823-PA 295 CG3823-PA 138..267 160..286 156 26.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17784-PA 294 GI17784-PA 1..294 1..294 1350 82.7 Plus
Dmoj\GI17220-PA 306 GI17220-PA 13..288 1..276 503 37.5 Plus
Dmoj\GI23782-PA 312 GI23782-PA 39..273 26..261 497 38.6 Plus
Dmoj\GI18224-PA 290 GI18224-PA 16..286 20..290 335 30.6 Plus
Dmoj\GI12324-PA 353 GI12324-PA 50..298 18..266 261 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25934-PA 294 GL25934-PA 1..294 1..294 1478 91.5 Plus
Dper\GL21107-PA 337 GL21107-PA 44..319 1..276 499 37.2 Plus
Dper\GL25817-PA 331 GL25817-PA 39..293 26..261 375 31.2 Plus
Dper\GL21211-PA 340 GL21211-PA 66..323 20..280 333 30.2 Plus
Dper\GL16163-PA 311 GL16163-PA 8..264 18..272 276 27.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19258-PA 294 GA19258-PA 1..294 1..294 1478 91.5 Plus
Dpse\GA10180-PA 337 GA10180-PA 44..319 1..276 499 37.2 Plus
Dpse\GA19271-PA 311 GA19271-PA 39..273 26..261 469 37.3 Plus
Dpse\GA10016-PA 290 GA10016-PA 16..273 20..280 334 30.2 Plus
Dpse\GA28411-PA 311 GA28411-PA 8..264 18..272 276 27.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13560-PA 294 GM13560-PA 1..294 1..294 1528 96.3 Plus
Dsec\GM17010-PA 324 GM17010-PA 36..306 6..276 491 38.2 Plus
Dsec\GM16464-PA 311 GM16464-PA 39..273 26..261 474 37.7 Plus
Dsec\GM17350-PA 303 GM17350-PA 29..286 20..280 321 29.8 Plus
Dsec\GM14655-PA 311 GM14655-PA 8..252 18..260 260 28.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22495-PA 294 GD22495-PA 1..294 1..294 1559 99 Plus
Dsim\GD21760-PA 321 GD21760-PA 33..303 6..276 489 38.2 Plus
Dsim\GD23473-PA 311 GD23473-PA 39..273 26..261 477 37.7 Plus
Dsim\GD24208-PA 290 GD24208-PA 16..273 20..280 323 29.8 Plus
Dsim\GD13840-PA 311 GD13840-PA 8..252 18..260 260 28.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17610-PA 294 GJ17610-PA 1..294 1..294 1406 86.7 Plus
Dvir\GJ17977-PA 306 GJ17977-PA 13..288 1..276 511 38.4 Plus
Dvir\GJ20969-PA 312 GJ20969-PA 35..273 22..261 487 37.5 Plus
Dvir\GJ18131-PA 290 GJ18131-PA 16..286 20..290 338 29.9 Plus
Dvir\GJ12135-PA 310 GJ12135-PA 7..251 18..260 275 27.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24724-PA 292 GK24724-PA 2..292 4..294 1424 89.3 Plus
Dwil\GK18196-PA 306 GK18196-PA 13..288 1..276 507 38.3 Plus
Dwil\GK24307-PA 312 GK24307-PA 39..273 26..261 480 37.7 Plus
Dwil\GK24799-PA 290 GK24799-PA 16..286 20..290 355 31.3 Plus
Dwil\GK21135-PA 310 GK21135-PA 7..281 18..290 276 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18359-PA 294 GE18359-PA 1..294 1..294 1550 98 Plus
Dyak\GE12652-PA 329 GE12652-PA 41..308 6..273 489 38.3 Plus
Dyak\GE14561-PA 311 GE14561-PA 39..273 26..261 476 37.7 Plus
Dyak\GE13256-PA 291 GE13256-PA 16..272 20..280 320 30.6 Plus
Dyak\GE21129-PA 310 GE21129-PA 7..251 18..260 280 27.7 Plus