Clone MIP26751 Report

Search the DGRC for MIP26751

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:267
Well:51
Vector:pOT2
Associated Gene/TranscriptCG43085-RA
Protein status:MIP26751.pep: gold
Sequenced Size:917

Clone Sequence Records

MIP26751.complete Sequence

917 bp assembled on 2010-08-29

GenBank Submission: BT125639.1

> MIP26751.complete
TAAGATGAAGGCAGTTACTTCAAGAGTGTTGGGTTCGATCCTAGTGTTAT
TATTGATACATTTAACATCAGCAAAAGAAGCGGAGGTTCACTTAACAAAT
CCTCCAACAGAATGCAGACTGGTGTGTAATCCAGGGTATCATATCGTGGT
TAAAAAGGGTACCTTGTATCATAATGGTAGGAAGCTTGACGATAATGCAC
GGTATGCGCCGAAGATGGCGTGTGATTTGGAGAACAGTTGCAACTTTAAA
TTTACGCCACAAACATTAAGTTACATGAATACAGCAATTAATGTAGGCAC
ACAACTAACTATTAATTACGACTGCAAGCGGGATAACTTCCAAGGAGATC
CGAGAAGGATAACAGATTATACGAAAACGCAAGGATGTCCGCAAGACTCT
TTTGTTCAGAAACACGTCGCATATTTTAACGATGAAAATATTGCTCCCAA
GAGGGATACACCTGTCGCGCAAAGGGAAAGGGAAATGATTGCCATGGGCG
TATGTGCTCAGGTCAAACGTTTTAGGCAAAACAACCCAAGAACGCCCATC
GATCCACATCTTGGCACAGTGTACTTGATATTTGACAATAGAACAAGTAA
AAATGATTTCATGCCGAGTCCTGATGTTAGAAAGTGCCAACTTAAGCCCA
ATTCTCTGACCAAGACATACAAGTATGATTGCGAGAGGAAAGCGGATAAA
TGGACATGTACTTTTGCCAGCAAGGGAAGGGACTTGGCCATAAATGACAA
GATTACAAGTCACTTAGGATGATTATCATTTTATTGTATAGGACTCAAGG
CTCAAATGGGAATGCAAGACACAGCGGACTAATTTTATTCCAAACGAAAT
TTTAAATATACATATATGCAATTGATCAAATTCGTAATAAAAATATGAAT
AAAAAAAAAAAAAAAAA

MIP26751.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:16:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17635081..17635916 900..65 4150 99.8 Minus
chr3L 24539361 chr3L 17635976..17636039 64..1 320 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17645482..17646321 904..65 4200 100 Minus
3L 28110227 3L 17646381..17646444 64..1 320 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17638582..17639421 904..65 4200 100 Minus
3L 28103327 3L 17639481..17639544 64..1 320 100 Minus
Blast to na_te.dros performed on 2019-03-15 21:16:56 has no hits.

MIP26751.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:17:55 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17635081..17635916 65..900 99 <- Minus
chr3L 17635976..17636039 1..64 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:40:51 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 1..768 5..772 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:42:44 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 1..768 5..772 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:48:13 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 1..768 5..772 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:40:51 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 26..797 1..772 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:42:44 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 26..925 1..900 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:13 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
CG43085-RA 26..925 1..900 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:17:55 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17645486..17646321 65..900 100 <- Minus
3L 17646381..17646444 1..64 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:17:55 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17645486..17646321 65..900 100 <- Minus
3L 17646381..17646444 1..64 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:17:55 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17645486..17646321 65..900 100 <- Minus
3L 17646381..17646444 1..64 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:42:44 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17638586..17639421 65..900 100 <- Minus
arm_3L 17639481..17639544 1..64 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:44:11 Download gff for MIP26751.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17638586..17639421 65..900 100 <- Minus
3L 17639481..17639544 1..64 100   Minus

MIP26751.hyp Sequence

Translation from 0 to 771

> MIP26751.hyp
KMKAVTSRVLGSILVLLLIHLTSAKEAEVHLTNPPTECRLVCNPGYHIVV
KKGTLYHNGRKLDDNARYAPKMACDLENSCNFKFTPQTLSYMNTAINVGT
QLTINYDCKRDNFQGDPRRITDYTKTQGCPQDSFVQKHVAYFNDENIAPK
RDTPVAQREREMIAMGVCAQVKRFRQNNPRTPIDPHLGTVYLIFDNRTSK
NDFMPSPDVRKCQLKPNSLTKTYKYDCERKADKWTCTFASKGRDLAINDK
ITSHLG*

MIP26751.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG43085-PB 255 CG43085-PB 1..255 2..256 1376 100 Plus
CG43085-PA 255 CG43085-PA 1..255 2..256 1376 100 Plus

MIP26751.pep Sequence

Translation from 1 to 771

> MIP26751.pep
KMKAVTSRVLGSILVLLLIHLTSAKEAEVHLTNPPTECRLVCNPGYHIVV
KKGTLYHNGRKLDDNARYAPKMACDLENSCNFKFTPQTLSYMNTAINVGT
QLTINYDCKRDNFQGDPRRITDYTKTQGCPQDSFVQKHVAYFNDENIAPK
RDTPVAQREREMIAMGVCAQVKRFRQNNPRTPIDPHLGTVYLIFDNRTSK
NDFMPSPDVRKCQLKPNSLTKTYKYDCERKADKWTCTFASKGRDLAINDK
ITSHLG*

MIP26751.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG43085-PB 255 CG43085-PB 1..255 2..256 1376 100 Plus
CG43085-PA 255 CG43085-PA 1..255 2..256 1376 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:24:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12390-PA 255 GD12390-PA 1..255 2..256 1247 89.8 Plus