Clone MIP27169 Report

Clone Sequence Records

MIP27169.complete Sequence

1348 bp assembled on 2011-02-02

GenBank Submission: BT126101.1

> MIP27169.complete
AAAAACAAAACGTAGTTGTATGAAATTTTTGCAAATTTTTGTGGACTCAA
AACAGTTGGAAAATTAAAGAGACATGTCGGTTAATACGGCTCACGCCAAC
AATGGCGTGCTCATCCATGCTGGAGAGTACATACTGCTCCACAGCGACAG
TGTCTCCATGGAGTTCTCCGGTCAGGACAATCCCATCTTCAAGGGCTCCA
AAGGTGGCAGGATTTATCTCACCTCCCACCGAATGATCTTCAATAGCAAG
AAGTCCTCGGATTCGATGCAGTCGTTCAGTGCCCCGTTTGTTGCTCTTTC
GGATGTGGAAATCGAACAGCCCGTTTTCGGGGCCAACTACATCAAGGGAA
AGGTTCGCGCTCAGCCAAATGGAAACTACGTGGGCGAGGTCAAGTTCAAG
CTCCATTTCAAGGCAGGCGGCGCAATTGAATATGGTCAAGCTCTACTGCG
CTCCGCCAAGACGGCGATGAACAACTACCACCGCGGTGGTCTGGCTGGTG
ATGATCCGCCACCATATCAGCCGGCTGGATCCTGGAATGAGGCACCACCG
CCGGCATATCAGCCACCACCTGGCTACTATGGCTGGCTGCCGCAGCATGA
CGCATTCAGCGGCCCTGCGCCGAATACGGTCTATATGAGCGACAATCCGC
CGCCGTATCCGGGTATCGCACCACCTGCTCACCAACCAGCACCGCAACAG
CCGCAGGCACCGTCGTCGAATGAACCCAATTGGTATGGTTTTTCAGCGCC
GCCGCCGCAGCAGCAACAACAGCAGCCGGGCTATGGGCCACAAGGATGGG
CCGGTGGCTATGTCCAACCTCCGCCGTACGCTTCATGTGCCCCAAATTGT
CCACCACAGCCGCCGTACGCCGCTCCGGCTCAGACGTACAATGGTCCACA
GCCATATGGTGGATACGGCAATGTTCCTGGCGGATTTAATACCCCCGGAT
TTCAGCAACCGAATGGAAATCCAAATGGCTATCCAGGTGGACCACCGCCA
CCCGGACAACAAGCAGCAGGAGCAGCTGGAGGAGCCGCCGCATCTGGAGC
CAGCTTTATGGGCTTCAGCTTGCCCCCTGGAACAAAAGATAAAAAAATAT
GAGCAAAAGGACAAGAAAATTATGAACATCTTTAAAATAGTCGAAACATC
TAAAGATCTAAAATGTTATCAAGAATTTAATTGAAGTATCATGAACCACC
TTTTGCTTTCGGACGCTCAAAGTATTCAAGAGGCATCCAAAAACCATTCA
GAAGCATTCGTTCTGTTTATTTTTCTCACTTACAAAATTATTCAATTTGT
CCAAATAATAAATGATTTGTTAGCATAATTCAAAAAAAAAAAAAAAAA

MIP27169.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:36:18

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr3L	24539361	chr3L	12841651..12842065	668..1082	2000	98.8	Plus
chr3L	24539361	chr3L	12840841..12841140	130..429	1485	99.7	Plus
chr3L	24539361	chr3L	12842149..12842397	1083..1331	1215	99.2	Plus
chr3L	24539361	chr3L	12841258..12841496	430..668	1135	98.3	Plus
chr3L	24539361	chr3L	12840556..12840684	1..129	645	100	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:36:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3L	28110227	3L	12851308..12851722	668..1082	2075	100	Plus
3L	28110227	3L	12850498..12850797	130..429	1500	100	Plus
3L	28110227	3L	12851806..12852055	1083..1332	1250	100	Plus
3L	28110227	3L	12850915..12851153	430..668	1195	100	Plus
3L	28110227	3L	12850203..12850331	1..129	645	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:14

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
3L	28103327	3L	12844408..12844822	668..1082	2075	100	Plus
3L	28103327	3L	12843598..12843897	130..429	1500	100	Plus
3L	28103327	3L	12844906..12845155	1083..1332	1250	100	Plus
3L	28103327	3L	12844015..12844253	430..668	1195	100	Plus
3L	28103327	3L	12843303..12843431	1..129	645	100	Plus

Blast to na_te.dros performed 2019-03-17 01:36:16

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
TART-B	10654	TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1).	136..192	743..796	116	72.4	Plus
TART-B	10654	TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1).	9166..9222	743..796	116	72.4	Plus
Tc1-2	1644	Tc1-2 TC1-2 1644bp	1393..1448	1257..1311	115	69.6	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2376..2480	669..778	113	62.2	Plus
roo	9092	roo DM_ROO 9092bp	1031..1090	718..778	113	67.2	Plus

MIP27169.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:36:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr3L	12840556..12840684	1..129	100	->	Plus
chr3L	12840841..12841140	130..429	99	->	Plus
chr3L	12841258..12841496	430..668	98	->	Plus
chr3L	12841652..12842065	669..1082	98	->	Plus
chr3L	12842149..12842397	1083..1331	99		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-02 12:43:56 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11009-RA	1..1013	74..1086	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:44:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Wbp2-RG	1..1029	74..1102	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:03:53 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Wbp2-RG	1..1029	74..1102	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-02 12:43:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG11009-RA	44..1129	1..1086	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:44:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Wbp2-RG	44..1374	1..1331	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:03:53 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
Wbp2-RG	39..1369	1..1331	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:36:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	12850203..12850331	1..129	100	->	Plus
3L	12850498..12850797	130..429	100	->	Plus
3L	12850915..12851153	430..668	100	->	Plus
3L	12851309..12851722	669..1082	100	->	Plus
3L	12851806..12852054	1083..1331	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:36:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	12850203..12850331	1..129	100	->	Plus
3L	12850498..12850797	130..429	100	->	Plus
3L	12850915..12851153	430..668	100	->	Plus
3L	12851309..12851722	669..1082	100	->	Plus
3L	12851806..12852054	1083..1331	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:36:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	12850203..12850331	1..129	100	->	Plus
3L	12850498..12850797	130..429	100	->	Plus
3L	12850915..12851153	430..668	100	->	Plus
3L	12851309..12851722	669..1082	100	->	Plus
3L	12851806..12852054	1083..1331	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:44:55 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_3L	12843303..12843431	1..129	100	->	Plus
arm_3L	12843598..12843897	130..429	100	->	Plus
arm_3L	12844015..12844253	430..668	100	->	Plus
arm_3L	12844409..12844822	669..1082	100	->	Plus
arm_3L	12844906..12845154	1083..1331	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:56:54 Download gff for MIP27169.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
3L	12844409..12844822	669..1082	100	->	Plus
3L	12843598..12843897	130..429	100	->	Plus
3L	12844015..12844253	430..668	100	->	Plus
3L	12844906..12845154	1083..1331	100		Plus
3L	12843303..12843431	1..129	100	->	Plus

MIP27169.hyp Sequence

Translation from 73 to 1101

> MIP27169.hyp
MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLT
SHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG
NYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGGLAGDDPPPYQP
AGSWNEAPPPAYQPPPGYYGWLPQHDAFSGPAPNTVYMSDNPPPYPGIAP
PAHQPAPQQPQAPSSNEPNWYGFSAPPPQQQQQQPGYGPQGWAGGYVQPP
PYASCAPNCPPQPPYAAPAQTYNGPQPYGGYGNVPGGFNTPGFQQPNGNP
NGYPGGPPPPGQQAAGAAGGAAASGASFMGFSLPPGTKDKKI*

MIP27169.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:25:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Wbp2-PG	342	CG11009-PG	1..342	1..342	1913	100	Plus
Wbp2-PC	337	CG11009-PC	1..336	1..336	1883	100	Plus
Wbp2-PB	337	CG11009-PB	1..336	1..336	1883	100	Plus
Wbp2-PE	384	CG11009-PE	1..336	1..336	1883	100	Plus
Wbp2-PF	199	CG11009-PF	1..198	1..198	1075	100	Plus

MIP27169.pep Sequence

Translation from 73 to 1101

> MIP27169.pep
MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLT
SHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG
NYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGGLAGDDPPPYQP
AGSWNEAPPPAYQPPPGYYGWLPQHDAFSGPAPNTVYMSDNPPPYPGIAP
PAHQPAPQQPQAPSSNEPNWYGFSAPPPQQQQQQPGYGPQGWAGGYVQPP
PYASCAPNCPPQPPYAAPAQTYNGPQPYGGYGNVPGGFNTPGFQQPNGNP
NGYPGGPPPPGQQAAGAAGGAAASGASFMGFSLPPGTKDKKI*

MIP27169.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:36:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF23578-PA	398	GF23578-PA	1..341	1..338	1168	85.9	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:36:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG15603-PA	423	GG15603-PA	1..334	1..338	1662	96.7	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:36:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH17073-PA	435	GH17073-PA	1..324	1..322	947	78.9	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Wbp2-PG	342	CG11009-PG	1..342	1..342	1913	100	Plus
Wbp2-PC	337	CG11009-PC	1..336	1..336	1883	100	Plus
Wbp2-PB	337	CG11009-PB	1..336	1..336	1883	100	Plus
Wbp2-PE	384	CG11009-PE	1..336	1..336	1883	100	Plus
Wbp2-PF	199	CG11009-PF	1..198	1..198	1075	100	Plus
Wbp2-PD	226	CG11009-PD	1..198	1..198	1075	100	Plus
Rb97D-PG	465	CG6354-PG	249..458	146..327	190	31.1	Plus
Rb97D-PC	465	CG6354-PC	249..458	146..327	190	31.1	Plus
Rb97D-PA	465	CG6354-PA	249..458	146..327	190	31.1	Plus
CG10555-PB	926	CG10555-PB	560..741	145..335	190	36.6	Plus
CG10555-PA	926	CG10555-PA	560..741	145..335	190	36.6	Plus
Sec24CD-PA	1193	CG10882-PA	191..400	141..336	190	33.6	Plus
Sec24CD-PB	1193	CG10882-PB	191..400	141..336	190	33.6	Plus
Sec24CD-PC	1231	CG10882-PC	191..400	141..336	190	33.6	Plus
Sec24CD-PA	1193	CG10882-PA	139..340	145..315	182	34.1	Plus
Sec24CD-PB	1193	CG10882-PB	139..340	145..315	182	34.1	Plus
Sec24CD-PC	1231	CG10882-PC	139..340	145..315	182	34.1	Plus
Rb97D-PI	471	CG6354-PI	249..464	146..327	182	30.7	Plus
Rb97D-PF	471	CG6354-PF	249..464	146..327	182	30.7	Plus
Rb97D-PB	471	CG6354-PB	249..464	146..327	182	30.7	Plus
Rb97D-PH	471	CG6354-PH	249..464	146..327	182	30.7	Plus
ena-PG	664	CG15112-PG	267..474	148..330	180	33.8	Plus
CG15021-PA	420	CG15021-PA	212..375	158..328	178	33.7	Plus
CG15021-PA	420	CG15021-PA	103..282	146..312	173	32.2	Plus
ena-PE	684	CG15112-PE	289..494	150..330	173	33.6	Plus
ena-PC	684	CG15112-PC	289..494	150..330	173	33.6	Plus
ena-PA	684	CG15112-PA	289..494	150..330	173	33.6	Plus
ena-PD	687	CG15112-PD	292..497	150..330	173	33.6	Plus
ena-PB	834	CG15112-PB	438..643	150..330	173	33.6	Plus
ena-PF	980	CG15112-PF	585..790	150..330	173	33.6	Plus
CG15021-PA	420	CG15021-PA	150..308	145..314	172	35.9	Plus
CG10555-PB	926	CG10555-PB	780..918	142..282	171	33.8	Plus
CG10555-PA	926	CG10555-PA	780..918	142..282	171	33.8	Plus
Bap111-PA	749	CG7055-PA	561..741	139..300	170	31.5	Plus
CG10555-PB	926	CG10555-PB	464..702	136..327	164	29	Plus
CG10555-PA	926	CG10555-PA	464..702	136..327	164	29	Plus
CG10555-PB	926	CG10555-PB	660..899	133..319	161	28.2	Plus
CG10555-PA	926	CG10555-PA	660..899	133..319	161	28.2	Plus
CG10555-PB	926	CG10555-PB	429..622	142..325	160	30.4	Plus
CG10555-PA	926	CG10555-PA	429..622	142..325	160	30.4	Plus
CG10555-PB	926	CG10555-PB	384..544	183..313	159	35.3	Plus
CG10555-PA	926	CG10555-PA	384..544	183..313	159	35.3	Plus
osa-PE	2555	CG7467-PE	533..749	146..335	158	29.8	Plus
osa-PC	2556	CG7467-PC	533..749	146..335	158	29.8	Plus
osa-PF	2559	CG7467-PF	533..749	146..335	158	29.8	Plus
osa-PA	2703	CG7467-PA	533..749	146..335	158	29.8	Plus
osa-PB	2716	CG7467-PB	533..749	146..335	158	29.8	Plus
osa-PD	2716	CG7467-PD	533..749	146..335	158	29.8	Plus
osa-PA	2703	CG7467-PA	1241..1441	138..326	157	30.6	Plus
osa-PB	2716	CG7467-PB	1254..1454	138..326	157	30.6	Plus
osa-PD	2716	CG7467-PD	1254..1454	138..326	157	30.6	Plus
Rb97D-PE	434	CG6354-PE	249..418	146..308	156	31.7	Plus
Rb97D-PD	434	CG6354-PD	249..418	146..308	156	31.7	Plus
CG9425-PD	2103	CG9425-PD	1404..1621	137..313	155	31.7	Plus
CG9425-PC	2103	CG9425-PC	1404..1621	137..313	155	31.7	Plus
CG9425-PB	2103	CG9425-PB	1404..1621	137..313	155	31.7	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:36:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI11667-PA	403	GI11667-PA	1..356	1..337	972	69.7	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:37:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL20583-PA	208	GL20583-PA	1..146	54..199	664	95.9	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:37:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA10706-PA	388	GA10706-PA	1..341	1..337	1094	79.6	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:37:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM25376-PA	427	GM25376-PA	1..338	1..338	1702	98.5	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:37:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD14410-PA	427	GD14410-PA	1..338	1..338	1713	99.1	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:37:03

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ11345-PA	411	GJ11345-PA	1..364	1..337	983	73.8	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:37:04

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK16830-PA	394	GK16830-PA	1..347	1..337	1036	75.6	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:37:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE21928-PA	337	GE21928-PA	1..337	1..337	1673	97.9	Plus

Library:	MIP
Tissue Source:	Pooled D melanogaster cDNA libraries
Created by:
Date Registered:	2008-10-08
Comments:
Original Plate Number:	271
Well:	69
Vector:	pOT2
Associated Gene/Transcript	Wbp2-RG
Protein status:	MIP27169.pep: gold
Sequenced Size:	1348

Clone MIP27169 Report

Clone and Library Details

Clone Sequence Records

MIP27169.complete Sequence

MIP27169.complete Blast Records

MIP27169.complete Sim4 Records

MIP27169.hyp Sequence

MIP27169.hyp Blast Records

MIP27169.pep Sequence

MIP27169.pep Blast Records