Clone MIP27931 Report

Search the DGRC for MIP27931

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:279
Well:31
Vector:pOT2
Associated Gene/Transcriptcpx-RZ
Protein status:MIP27931.pep: gold
Sequenced Size:1968

Clone Sequence Records

MIP27931.complete Sequence

1968 bp assembled on 2010-12-14

GenBank Submission: BT125911.1

> MIP27931.complete
GCTTAGGCAACGGTTGCATCCACTTGGGACGGAAACGAAGATAGAAGGCC
CCACGACGGACAGATAGCATCGGTCCAGAGCGCCCTGAAATCATGAATTT
CATTGGTATGAAGCATAAACCGAGTCTAAGTCCAGTCTGCCTTCCAACAC
TGCCTTTCGGTTCGATTTCCGGCGGCGGACACACTGAATTCGTCTTCTTC
CCCTTCTACAACACACTGCCACCACTCAACCAACCTACTAAACTACTACT
CAACTCGCCACAACACACTAACGCTGTCACTCTTACCGAACTTCTGTTCC
ATGCGCTGTAGGAGGTGATGGAGGCGATGATGGCGACGACAAGGAAAAGG
CAGAGGAGGAGGAGAGGGAGCGTCAGGAGGCCATCAAGGAGGCCGAGGAC
CGCCGAAAGGAAAAGCACCGGAAAATGGAGGAGGAGCGCGAGAAGATGAG
GCAAGACATTCGCGATAAGTACAACATCAAGAAGAAGGAGGAGATCGTGG
AGGCGGCCCCCCAAGAAGAGCCCAATCCCCTGATGCGGAAAAAGAAGACG
CCCGAGGAACTCGCCGCCGAAGCGGAGCAGGAAGAGCTCGACGATTTTAC
AAGTAAGTCTTTGCTGCCACTGTCAAGTGCCGTTGAACCTGGCTCAGCTA
GTGGCATCTATATACTGCAATTGCAACCCACTAATTTCTCCGCTCCGATT
GCTCCTGCTCCTATTCTATAACTGTATCAGATTTTGAGTTGTCGAAATTT
TTTGTTTCTTACTACTTTGCCAGCGGTTTACGCGAGTCCCGCCAGGTCCA
GACAATACCTATACAAATTGACTTAAAAACTGAAACCACAACAAAAACCG
TTTAATATCCGCTAAATATCCCACGGCGCTCGAAAGTAGTAATTGTGGTT
TTGTTTGTGCATCTGTGTGTCTCTCGTATCTTAATGCAATCGAACAACCC
AATAAAAGTCTATAAATAACTGCCCACTAACCGAACTATCTATCTCTCTA
TATATATGTATATTTATGTACTCTTTTCCATGTGCGTAAAACATCTAAGC
TACAAACCTAACTCTAATACTAACCCTAACTGCAACCCTATCTGTCTAAG
ATCTAATCTTCAATCTTGATGCAACGACGAATATAAACATTGTCAATTAT
ATTTTTATATAACAAGAGTGCACACCATTTCACATACTTCATTTTATTCA
GGTTTCAAACTTATGTTTCGTAACGCTTAATCATTTGTACGTGAGAATGA
CCACGAGAAATCTAGGCAGCATTTGAACATACAGTGGATGAATAATTTTT
ATGTTTTTCTTGAACTGTAATTGCATTTGTTGTTTAATATAAATTGTGGG
TAAACAGGCGGATGAATTCTGCTTAGGTTTTGTTATTCAATCAATTAGAA
AAAGGTAAGTGCGATTATTGGTAAAAACGTTTGTTTTCCTTATGTGTGGT
AATACTGTTGTAATACATTTGTATTCCAAAACTATTCTTCAGCCCCCAAA
TCACCAACAATTACAACTTTCGACTGCTCTAGCTCTTTTTTCACTGCCGC
TTATTCTTTGTAAATGTATCTTTAATATATCCAGCATAAAAATAACTCTA
CTGGAAAAAATAAGCAATGAAAGTAGCACATAATTCAAACCGAATACAAG
ATTTAGATTAGACCACATTAGGGGAACAAGTACATATCAACGTTTTTCTT
TTCGTATATTGTTTGAACATCATTATCACTCTCTATGCACTTTACAGTAC
TAATAACGCCTATTTTCTACATATTAATATAATCACTAACAGAAAACTTG
TGCTTGTGTGCTAAACCGCATTTTAAAACTGAACACTCATAACTATATAA
ATGTAACTGAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

MIP27931.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:20:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 121286..122682 468..1863 6935 99.9 Plus
chr3R 27901430 chr3R 117688..117990 1..303 1515 100 Plus
chr3R 27901430 chr3R 120840..121006 303..469 835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4295566..4296977 468..1878 6980 99.8 Plus
3R 32079331 3R 4291968..4292270 1..303 1515 100 Plus
3R 32079331 3R 4295120..4295286 303..469 835 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 4036397..4037808 468..1878 6990 99.7 Plus
3R 31820162 3R 4032799..4033101 1..303 1515 100 Plus
3R 31820162 3R 4035951..4036117 303..469 835 100 Plus
Blast to na_te.dros performed 2019-03-17 01:20:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 425..568 1013..874 124 57.9 Minus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 2683..2759 1589..1667 120 63.3 Plus
Dbuz\Kepler 722 Dbuz\Kepler KEPLER 722bp 420..496 1060..986 118 66.7 Minus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 6137..6282 1474..1322 118 56.2 Minus

MIP27931.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:20:49 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 117688..117989 1..302 100 -> Plus
chr3R 120840..121006 303..469 100 -> Plus
chr3R 121288..122682 470..1863 97   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2010-12-14 18:27:25 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RR 34..339 297..606 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:36:25 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RAB 49..474 296..721 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:55:40 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RAB 49..474 296..721 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-14 18:27:25 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RK 231..832 1..602 100 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:36:25 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RZ 1..1864 1..1863 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:55:40 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
cpx-RZ 231..2094 1..1863 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:49 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4291968..4292269 1..302 100 -> Plus
3R 4295120..4295286 303..469 100 -> Plus
3R 4295568..4296962 470..1863 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:49 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4291968..4292269 1..302 100 -> Plus
3R 4295120..4295286 303..469 100 -> Plus
3R 4295568..4296962 470..1863 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:49 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4291968..4292269 1..302 100 -> Plus
3R 4295120..4295286 303..469 100 -> Plus
3R 4295568..4296962 470..1863 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:36:25 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 117690..117991 1..302 100 -> Plus
arm_3R 120842..121008 303..469 100 -> Plus
arm_3R 121290..122684 470..1863 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:53:07 Download gff for MIP27931.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4032799..4033100 1..302 100 -> Plus
3R 4035951..4036117 303..469 100 -> Plus
3R 4036399..4037793 470..1863 99   Plus

MIP27931.pep Sequence

Translation from 424 to 720

> MIP27931.pep
MEEEREKMRQDIRDKYNIKKKEEIVEAAPQEEPNPLMRKKKTPEELAAEA
EQEELDDFTSKSLLPLSSAVEPGSASGIYILQLQPTNFSAPIAPAPIL*

MIP27931.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18201-PA 142 GF18201-PA 60..118 1..59 295 100 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12264-PA 142 GG12264-PA 60..118 1..59 295 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19100-PA 142 GH19100-PA 60..118 1..59 289 98.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
cpx-PZ 98 CG32490-PZ 1..98 1..98 490 100 Plus
cpx-PAB 157 CG32490-PAB 60..157 1..98 490 100 Plus
cpx-PE 138 CG32490-PE 60..128 1..69 310 91.3 Plus
cpx-PK 83 CG32490-PK 1..59 1..59 300 100 Plus
cpx-PJ 83 CG32490-PJ 1..59 1..59 300 100 Plus
cpx-PAA 125 CG32490-PAA 43..101 1..59 300 100 Plus
cpx-PL 128 CG32490-PL 46..104 1..59 300 100 Plus
cpx-PW 139 CG32490-PW 57..115 1..59 300 100 Plus
cpx-PP 139 CG32490-PP 57..115 1..59 300 100 Plus
cpx-PO 139 CG32490-PO 57..115 1..59 300 100 Plus
cpx-PM 139 CG32490-PM 57..115 1..59 300 100 Plus
cpx-PC 139 CG32490-PC 57..115 1..59 300 100 Plus
cpx-PX 142 CG32490-PX 60..118 1..59 300 100 Plus
cpx-PV 142 CG32490-PV 60..118 1..59 300 100 Plus
cpx-PH 142 CG32490-PH 60..118 1..59 300 100 Plus
cpx-PG 142 CG32490-PG 60..118 1..59 300 100 Plus
cpx-PA 142 CG32490-PA 60..118 1..59 300 100 Plus
cpx-PI 142 CG32490-PI 60..118 1..59 300 100 Plus
cpx-PY 143 CG32490-PY 61..119 1..59 300 100 Plus
cpx-PU 143 CG32490-PU 61..119 1..59 300 100 Plus
cpx-PS 146 CG32490-PS 64..122 1..59 300 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10852-PA 142 GI10852-PA 60..118 1..59 295 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12314-PA 123 GL12314-PA 60..101 1..43 130 67.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16944-PA 142 GA16944-PA 60..118 1..59 295 100 Plus
Dpse\GA16944-PB 83 GA16944-PB 1..60 1..60 291 98.3 Plus
Dpse\GA16944-PC 138 GA16944-PC 60..138 1..79 241 79.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10742-PA 142 GM10742-PA 60..118 1..59 295 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19714-PA 142 GD19714-PA 60..118 1..59 295 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14459-PA 142 GJ14459-PA 60..118 1..59 288 98.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10950-PA 142 GK10950-PA 60..118 1..59 295 100 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:45:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25403-PA 142 GE25403-PA 60..118 1..59 290 98.3 Plus

MIP27931.hyp Sequence

Translation from 424 to 720

> MIP27931.hyp
MEEEREKMRQDIRDKYNIKKKEEIVEAAPQEEPNPLMRKKKTPEELAAEA
EQEELDDFTSKSLLPLSSAVEPGSASGIYILQLQPTNFSAPIAPAPIL*

MIP27931.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
cpx-PZ 98 CG32490-PZ 1..98 1..98 490 100 Plus
cpx-PAB 157 CG32490-PAB 60..157 1..98 490 100 Plus
cpx-PE 138 CG32490-PE 60..128 1..69 310 91.3 Plus
cpx-PK 83 CG32490-PK 1..59 1..59 300 100 Plus
cpx-PJ 83 CG32490-PJ 1..59 1..59 300 100 Plus