BDGP Sequence Production Resources |
Search the DGRC for MIP27969
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 279 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | Deaf1-RC |
Protein status: | MIP27969.pep: gold |
Sequenced Size: | 2060 |
2060 bp assembled on 2010-12-13
GenBank Submission: BT125910.1
> MIP27969.complete TTCCTGTGCAAATCGCATTGAATTAAATCGCAAACGCCATCAATTGGCCG CTGGACACTCACCCACATACATGTGACGAACGTGGGAATATGTGCGCTAT GGTAATGCAGTTGGACACCAAGGTTCGCATGGTCACATCCTCCTCCAACG ACAACAGTGGTAGCGGCGGCGCCAGTGGCGGTACAAGCGGAGCGGGCGGA GGAAACGGCGGTGGCGGTGTGGTTTCGGTGCCCGTATCCCTGCCCATCGG TTCGATGATAACCGGCACTACCTTCAATGTGATCACGCCCGACCAGCTGC CCCCTCACTTCAAGCCGATGCTGTGCGTCGACAACAATGGCTACCTGTCC GGCAGCACGGTCAGCATGGGCAACGACCTCAAGACGATCGTCATCCAGCA ACAGCAGACGCAACCAGGCGGCGGCGGTGGCGGCGCCAATAATGCGGGCA CCAATACGACCGCCACAAATACGATTGGACTGAATCACGATGGCTCCGGG AGCAACAATAGCCACGACAGCCTGGCCACCTTGGAGCACGCCGCGGGCGG AGCGAGTGGCGTCGGCGGTGGCGGCGGCGGAACGGGTGGTGGCTCCTCGG GATGGTCGGAGAACCCGTCAACCCAGCACAATGAGGTCTTCCAGATCCGC TGCAAAACCACCTGCGCCGAGTTATACCGCAGCAAGCTGGGCTCCGGCGG CCGTGGACGCTGTGTGAAGTACAAGGACAAGTGGCATACGCCCAGTGAGT TTGAGCATGTGTGTGGCCGGGGCTCCAGCAAGGATTGGAAGCGTTCGATC AAGTACGGCGGCAAATCGCTGCAGTCCCTCATCGATGAGGGTACGCTCAC GCCGCACGCGACCAACTGCAGCTGCACCGTCTGCTGCGACGACGAAGCAG GTGAGTCAGCTTCCGGCCCTGTCCGTCTCTTTACACCGTACAAGCGGCGG AAGCGGAATCAAACTGATCTCGATATGGAGTCTGGACCCAAACGCAAGCG TAACACCCATCATAGTAACAACAACAACAGTAACACCAATAACAACAACA CGAGCGGGAGCGGCGCCAACAACTGTGTGGATGTAACTGCAGCTGTGGCT GCTGCAACAGCCAGCGTGGTGGACGAGAACAACATGTTCCTGTCGGAAGA GAACATCACGTCCAAGGATGAGCCGTGGGCAGCGCTCAACGACAGCCTGG ACACCTCCACCGAGCTGGTCGATCAGTCGCAGATGGGCAACACGTACGAA CGGGAAACGTTTGTGGTGAACATCAACGATGGATCCTCCATCGCCGTCCT GGACACCAGCCAGTCGATGAAGAACATCGAGCACGTGTACTGCACCATGG TCAAGGCCACCAATGACTTCAAACGCATGCTTAACGACATGAAGCAGTCC TTCGAGCGTCGCATCGAGGTTCTGCAAAAGGAGCGCGATGCAGCGGTCAG CGCGATGCGTGTCCAAGTGCACGCGGACATCGATGATCCAAATATTTCAG GCTCCCTGCACGGCAACGAGATCATTTCGGCTAAGAAGTGCGCCAACTGT AACCGCGAAGCATTGGCCGAGTGCTCACTGTGCCGAAAGACGCCGTACTG CTCGGAGTTCTGCCAGCGGAAGGATTGGAATGCTCACCAGGTGGAGTGCA CAAGGAATCCACAAACGACAACGCAGCAGGTCATGCTGTTGATCGACGAT CAGTCCTAAGCAACGTAACGAAATGTACATACAAATTTTACTACTAATTA ATACGATTATAGGAAGTCGACCCCCCCTCCCCCAAGTCGCTAAAGTCCTT GCAGTTCGGTTCAGGTCAAACACCTGTAGTCCACTCCCACTCCCTTCCCC CTCGACCCCTCTCTTCCCCCAAAGTTCCCATTAGAAGGCCTGCATCCTCT TAGACGTATGTCCTACATTAATGTAATTCTTAACGTACATATAACTATAT AAATATATATACATTTTACTATTGAACGTAGGGCAAGCCAGCAAAGAAAA AAAAAATAACAAAAAACAAGCGAAACGAAAGTAAAATTAATTAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19808472..19809380 | 1..909 | 4515 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 19817677..19818307 | 908..1538 | 3155 | 100 | Plus |
chr3L | 24539361 | chr3L | 19818380..19818885 | 1537..2042 | 2485 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19819102..19820010 | 1..909 | 4545 | 100 | Plus |
3L | 28110227 | 3L | 19828315..19828945 | 908..1538 | 3155 | 100 | Plus |
3L | 28110227 | 3L | 19829018..19829537 | 1537..2056 | 2570 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19812202..19813110 | 1..909 | 4545 | 100 | Plus |
3L | 28103327 | 3L | 19821415..19822045 | 908..1538 | 3155 | 100 | Plus |
3L | 28103327 | 3L | 19822118..19822637 | 1537..2056 | 2570 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 7729..7828 | 1901..1805 | 115 | 59 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19808472..19808619 | 1..148 | 100 | == | Plus |
chr3L | 19808691..19809380 | 220..909 | 99 | -> | Plus |
chr3L | 19817679..19818307 | 910..1538 | 94 | -> | Plus |
chr3L | 19818382..19818833 | 1539..1990 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RA | 130..1731 | 108..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RC | 1..1620 | 90..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RC | 1..1620 | 90..1709 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RA | 479..2413 | 108..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RC | 1..2042 | 1..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Deaf1-RC | 1..2042 | 1..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19819102..19820010 | 1..909 | 100 | -> | Plus |
3L | 19828317..19828945 | 910..1538 | 100 | -> | Plus |
3L | 19829020..19829523 | 1539..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19819102..19820010 | 1..909 | 100 | -> | Plus |
3L | 19828317..19828945 | 910..1538 | 100 | -> | Plus |
3L | 19829020..19829523 | 1539..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19819102..19820010 | 1..909 | 100 | -> | Plus |
3L | 19828317..19828945 | 910..1538 | 100 | -> | Plus |
3L | 19829020..19829523 | 1539..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19812202..19813110 | 1..909 | 100 | -> | Plus |
arm_3L | 19821417..19822045 | 910..1538 | 100 | -> | Plus |
arm_3L | 19822120..19822623 | 1539..2042 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19812202..19813110 | 1..909 | 100 | -> | Plus |
3L | 19821417..19822045 | 910..1538 | 100 | -> | Plus |
3L | 19822120..19822623 | 1539..2042 | 100 | Plus |
Translation from 89 to 1708
> MIP27969.pep MCAMVMQLDTKVRMVTSSSNDNSGSGGASGGTSGAGGGNGGGGVVSVPVS LPIGSMITGTTFNVITPDQLPPHFKPMLCVDNNGYLSGSTVSMGNDLKTI VIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGSGSNNSHDSLATLEH AAGGASGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKL GSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDE GTLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDMESGP KRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAATASVVDENNMF LSEENITSKDEPWAALNDSLDTSTELVDQSQMGNTYERETFVVNINDGSS IAVLDTSQSMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEVLQKERD AAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRK TPYCSEFCQRKDWNAHQVECTRNPQTTTQQVMLLIDDQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23595-PA | 583 | GF23595-PA | 45..583 | 7..539 | 2069 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16060-PA | 572 | GG16060-PA | 44..572 | 7..539 | 2796 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14660-PA | 561 | GH14660-PA | 44..561 | 7..539 | 1951 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Deaf1-PC | 539 | CG8567-PC | 1..539 | 1..539 | 2868 | 100 | Plus |
Deaf1-PE | 536 | CG8567-PE | 1..536 | 1..539 | 2839 | 99.4 | Plus |
Deaf1-PD | 576 | CG8567-PD | 44..576 | 7..539 | 2836 | 100 | Plus |
Deaf1-PA | 576 | CG8567-PA | 44..576 | 7..539 | 2836 | 100 | Plus |
Deaf1-PB | 573 | CG8567-PB | 44..573 | 7..539 | 2807 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11644-PA | 565 | GI11644-PA | 44..565 | 7..539 | 1940 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15737-PA | 250 | GL15737-PA | 1..250 | 296..539 | 1035 | 86.1 | Plus |
Dper\GL15736-PA | 243 | GL15736-PA | 49..231 | 7..206 | 533 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21169-PA | 567 | GA21169-PA | 49..567 | 7..539 | 2008 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19656-PA | 567 | GM19656-PA | 76..567 | 45..539 | 2645 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14830-PA | 573 | GD14830-PA | 44..573 | 7..539 | 2829 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11325-PA | 574 | GJ11325-PA | 44..574 | 7..539 | 1987 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16969-PA | 626 | GK16969-PA | 60..626 | 8..539 | 2027 | 77.1 | Plus |
Translation from 89 to 1708
> MIP27969.hyp MCAMVMQLDTKVRMVTSSSNDNSGSGGASGGTSGAGGGNGGGGVVSVPVS LPIGSMITGTTFNVITPDQLPPHFKPMLCVDNNGYLSGSTVSMGNDLKTI VIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGSGSNNSHDSLATLEH AAGGASGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKL GSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDE GTLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDMESGP KRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAATASVVDENNMF LSEENITSKDEPWAALNDSLDTSTELVDQSQMGNTYERETFVVNINDGSS IAVLDTSQSMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEVLQKERD AAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRK TPYCSEFCQRKDWNAHQVECTRNPQTTTQQVMLLIDDQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Deaf1-PC | 539 | CG8567-PC | 1..539 | 1..539 | 2868 | 100 | Plus |
Deaf1-PE | 536 | CG8567-PE | 1..536 | 1..539 | 2839 | 99.4 | Plus |
Deaf1-PD | 576 | CG8567-PD | 44..576 | 7..539 | 2836 | 100 | Plus |
Deaf1-PA | 576 | CG8567-PA | 44..576 | 7..539 | 2836 | 100 | Plus |
Deaf1-PB | 573 | CG8567-PB | 44..573 | 7..539 | 2807 | 99.4 | Plus |