MIP28030.complete Sequence
2126 bp assembled on 2010-11-12
GenBank Submission: BT125774.1
> MIP28030.complete
AGCGGAATTCCGCGGCAACATGTAGAGCAGCAACAAAGGCAGCGAACGAA
AAACTACAGAAAATAAATAAAAGGAAAACAACAAACACGAATTAGTGCTA
TATGTAAAAGTCCAAAAAACCACCCGAAAATTGGACAAGTGTCGCCGGCG
GTGGGCAATCAAAAAATAAAACATTCAGGGCATCACAGATGCCGCGATGA
CGGAGCCAATTAGTGCGGCGGTGCAGCGGCGGAGGCAACTGCTCCGCAGC
GTGGAAAGTTTGCGCGGTCGTGTTCGTCAAGTGCTAAAATGTGTTATTAA
TCTGCATATTGAGTTTTTGGTAATTGATCGACGAACCTCTTCCCTTTCTT
TCCCTGTCCAAATTGTTTTTACCACACAAGCGTAATCCACTTGGCCGCAG
AGTTACACTTTTGTTGCTGGTTTAAAGTGTTGCAAACACATTGACAGATT
CTATATCTGGTATATATGTACAACTGTGCCTCTGTCTGTATAATCTCCTT
CTTATCTGGCCTTTGTGCCACTTCTGTTATCGCTCCATCACTTTCGAAAT
ATTATCTGTGCTTTCACAAACAATTCTGTTCATTTCGGCTTTCATTCTAA
AAATAGCTCTTTTATTTGGATACAAAAATTAAATTGTAATGCATTAAGTA
AGCTAGTAGCAGTAAAATTATCTTACCATTTTTACTAAATGCCGTCTTCA
ACTAGTCGTATACGTAATCTTCATAAAAGTAACGTCACATTTTTGCATGC
TTTTCTTAATGAAAGCTTGTCAACAAACTCTTAGCATTTAGCTTAACAAT
GGTCAACCGACTATATCTCTTAACCCCTTTTAGCCATTGTAATTTGTTAT
CGCTATTTCTGCTGCCATTTCACCTGCTATCACCTGTTGTTCAACAATGC
GCGACCGGCAACTCTGTTAACAGCTGCAGCAGCGATTTGGAACATGTTAA
TGCAATTATAGCCAGTTATTGGGAACGAAATGTTAGAATGTTGGACGGGT
CAGAGAGGGTTGGGGGTGCGACGTGGGGGTAGTTGGGGACTGCAGTGATT
ACTAGCACCGCTAATTAGACAATGTCGGTTCGGCCATAGGCAAACGAACG
GTTTCGCAATGCATGGCACAGTCATGGCCAGATGAATAAGTATAAAGTTA
TTTCCGCACAGGATGATTACCCGCTTCTTCGTTTGATTTTAACTTTTGAT
AACTACCTTTTTGGTGTAGAGTGTTTGGGGTAGGGTTTACTTTTCACCCC
TTCGAAACATGCACCCAACATGAGCTTAGTTGGCCGTGTTCCTAGGCTTG
GCTAATTTGGCACTAATAGAGACGCTAGTGACGAGGCCTTTGGAAAGATA
TTAGAGCTGAAATCCGAGCCAACATCGCCGAATGAATGGCGCGAATAAGG
GGGTCCGGAATGGCGACCTGGATGGGTGGATAGCTCAGCCGGCGGGAAAG
TGCTCGAATCCGATGTGGCAGCTTTGCTGGATGAGGTGCGCGAATTCAAC
GACGACCACGAGGAGATGCAGCGCCTGGACAGGATGATCGAGGCTCTGCG
GGACTATAGCGGACCCACGATATGCCACGAGTGGCCCTATCCCCTTATCT
TCAAAGGCACAATCGACGAGGCACATGTCGCACAAATACTCAATGCCAGC
GAACTGGATTTGGATACGAAGTTGGTCAAGGTGTCCGGCGGAAGGAACTG
CATCCATGTGGAATCCGATGTGGTCACAGCTCAAAGGCGCTCCAGATTGC
TGTGGTTCTCCAGAAGAAGCAGGGGGAAACGAGCTGAGCGCTTAAAGGAA
CCTAATCCTGTAGTTTGAGCTTAGCTCTGAGATTGAAACTAGTCCGAAAT
GCATATGAACAAAGTATTGTAGCCCAAGCTATAATCTGCCATTACAAAAG
AGCCGAACATATTTGAGTATAGTATAATTAAGAAAGACTGCGCTGAGATG
TCATTAACCTCCTTTAATTGCAAATTATAAATTGACATCCTTAAGCACAT
AATTTTTGAAGAAGCATGACATGTTAAAAAAAAATATTTGAAATATCATA
TTCCATCTAAGTTAAGAACCTTGTGTGATTAATAAAACGATTTCACTTGA
AAGTATAAAAAAAAAAAAAAAAAAAA
MIP28030.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:07:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 4838336..4839510 | 1173..1 | 5415 | 97.8 | Minus |
chr3L | 24539361 | chr3L | 4837202..4837858 | 2106..1450 | 3255 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 4837972..4838250 | 1451..1173 | 1290 | 97.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4838924..4840096 | 1173..1 | 5865 | 100 | Minus |
3L | 28110227 | 3L | 4837790..4838447 | 2107..1450 | 3290 | 100 | Minus |
3L | 28110227 | 3L | 4838561..4838839 | 1451..1173 | 1395 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:03:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 4838924..4840096 | 1173..1 | 5865 | 100 | Minus |
3L | 28103327 | 3L | 4837790..4838447 | 2107..1450 | 3290 | 100 | Minus |
3L | 28103327 | 3L | 4838561..4838839 | 1451..1173 | 1395 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-17 01:07:17 has no hits.
MIP28030.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:07:56 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 4837202..4837858 | 1450..2106 | 99 | <- | Minus |
chr3L | 4837974..4838249 | 1174..1449 | 97 | <- | Minus |
chr3L | 4838336..4839510 | 1..1173 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-11-12 11:12:43 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RA | 9..378 | 1449..1818 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:44:10 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RA | 9..378 | 1449..1818 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-03 20:23:50 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 17:44:56 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-12 11:12:43 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RA | 9..378 | 1449..1818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:44:09 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RA | 9..378 | 1449..1818 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:23:50 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RD | 1..2106 | 1..2106 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:44:56 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13707-RD | 1..2106 | 1..2106 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:07:56 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4837791..4838447 | 1450..2106 | 100 | <- | Minus |
3L | 4838563..4838838 | 1174..1449 | 100 | <- | Minus |
3L | 4838924..4840096 | 1..1173 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:07:56 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4837791..4838447 | 1450..2106 | 100 | <- | Minus |
3L | 4838563..4838838 | 1174..1449 | 100 | <- | Minus |
3L | 4838924..4840096 | 1..1173 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:07:56 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4837791..4838447 | 1450..2106 | 100 | <- | Minus |
3L | 4838563..4838838 | 1174..1449 | 100 | <- | Minus |
3L | 4838924..4840096 | 1..1173 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:23:50 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4837791..4838447 | 1450..2106 | 100 | <- | Minus |
arm_3L | 4838563..4838838 | 1174..1449 | 100 | <- | Minus |
arm_3L | 4838924..4840096 | 1..1173 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:51:19 Download gff for
MIP28030.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4837791..4838447 | 1450..2106 | 100 | <- | Minus |
3L | 4838563..4838838 | 1174..1449 | 100 | <- | Minus |
3L | 4838924..4840096 | 1..1173 | 100 | | Minus |
MIP28030.pep Sequence
Translation from 1515 to 1817
> MIP28030.pep
MQRLDRMIEALRDYSGPTICHEWPYPLIFKGTIDEAHVAQILNASELDLD
TKLVKVSGGRNCIHVESDVVTAQRRSRLLWFSRRSRGKRAERLKEPNPVV
*
MIP28030.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 10:49:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20087-PA | 93 | GF20087-PA | 1..93 | 1..97 | 286 | 60.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 10:49:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14157-PA | 138 | GG14157-PA | 37..135 | 1..99 | 488 | 90.9 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 10:49:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH15787-PA | 153 | GH15787-PA | 73..116 | 1..44 | 229 | 88.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13707-PD | 100 | CG13707-PD | 1..100 | 1..100 | 522 | 100 | Plus |
CG13707-PC | 100 | CG13707-PC | 1..100 | 1..100 | 522 | 100 | Plus |
CG13707-PB | 163 | CG13707-PB | 64..163 | 1..100 | 522 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 10:49:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI12566-PA | 144 | GI12566-PA | 46..139 | 1..91 | 256 | 56.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 10:49:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL17923-PA | 137 | GL17923-PA | 48..132 | 1..88 | 274 | 62.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 10:49:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12473-PA | 137 | GA12473-PA | 48..132 | 1..88 | 279 | 62.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 10:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13943-PA | 220 | GM13943-PA | 121..220 | 1..100 | 509 | 95 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 10:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13227-PA | 164 | GD13227-PA | 64..164 | 1..100 | 498 | 93.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 10:49:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ15470-PA | 143 | GJ15470-PA | 53..133 | 1..83 | 239 | 55.3 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 10:49:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK17592-PA | 162 | GK17592-PA | 43..89 | 1..47 | 229 | 80.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 10:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20582-PA | 163 | GE20582-PA | 64..163 | 1..100 | 489 | 92 | Plus |
MIP28030.hyp Sequence
Translation from 1515 to 1817
> MIP28030.hyp
MQRLDRMIEALRDYSGPTICHEWPYPLIFKGTIDEAHVAQILNASELDLD
TKLVKVSGGRNCIHVESDVVTAQRRSRLLWFSRRSRGKRAERLKEPNPVV
*
MIP28030.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:33:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13707-PD | 100 | CG13707-PD | 1..100 | 1..100 | 522 | 100 | Plus |
CG13707-PC | 100 | CG13707-PC | 1..100 | 1..100 | 522 | 100 | Plus |
CG13707-PB | 163 | CG13707-PB | 64..163 | 1..100 | 522 | 100 | Plus |