MIP29201.complete Sequence
543 bp assembled on 2011-03-01
GenBank Submission: BT126110.1
> MIP29201.complete
AACACATCTAAAGTAACACAGGAACAGGAATCCCAATGACCAACACCTTT
TGGAAATAAATTTCTTGTCGTGACAATATTCTCGTTTCGGTTCTCGAGTG
AGTGCGTATCCGTGATCCTTGTTTACTTTGTGGATTCTCTCCATCCATTG
ACTTCCACCCAAATATCCTAATCCTATCCAAGATGTGCTGCAATCCTGGA
GGCTGCTGCAACCTGCCCTCCTGCATCCAGTGCACCAACTTTTGTTTCAA
CTGCTGGACGGGAACTGCTGCAGTGCCATGTTGCCGAGGTAGTTGCATTC
CGGGATGCAGTAGCAGCCCTGGATGCCGTTGCTGATTATCACCAAAATTA
TTACACAAGTCTACAACTAAAAACTGAAATAAACTAACAGATACCCCAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP29201.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:46:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 19180763..19181088 | 397..72 | 1615 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 19181149..19181220 | 72..1 | 360 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:46:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19182188..19182516 | 400..72 | 1645 | 100 | Minus |
2L | 23513712 | 2L | 19182577..19182648 | 72..1 | 360 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:02:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19182188..19182516 | 400..72 | 1645 | 100 | Minus |
2L | 23513712 | 2L | 19182577..19182648 | 72..1 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-17 01:46:29 has no hits.
MIP29201.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:47:35 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 19180763..19181087 | 73..397 | 99 | <- | Minus |
chr2L | 19181149..19181220 | 1..72 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 11:11:36 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 1..153 | 183..335 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:52:26 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 1..153 | 183..335 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:10:53 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 1..153 | 183..335 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 11:11:35 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 12..408 | 1..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:52:26 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 1..397 | 1..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:10:53 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42688-RA | 1..397 | 1..397 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:35 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19182191..19182515 | 73..397 | 100 | <- | Minus |
2L | 19182577..19182648 | 1..72 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:35 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19182191..19182515 | 73..397 | 100 | <- | Minus |
2L | 19182577..19182648 | 1..72 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:35 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19182191..19182515 | 73..397 | 100 | <- | Minus |
2L | 19182577..19182648 | 1..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:26 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19182191..19182515 | 73..397 | 100 | <- | Minus |
arm_2L | 19182577..19182648 | 1..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:49:31 Download gff for
MIP29201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19182191..19182515 | 73..397 | 100 | <- | Minus |
2L | 19182577..19182648 | 1..72 | 100 | | Minus |
MIP29201.hyp Sequence
Translation from 182 to 334
> MIP29201.hyp
MCCNPGGCCNLPSCIQCTNFCFNCWTGTAAVPCCRGSCIPGCSSSPGCRC
*
MIP29201.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:00:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42688-PB | 50 | CG42688-PB | 1..50 | 1..50 | 323 | 100 | Plus |
CG42688-PA | 50 | CG42688-PA | 1..50 | 1..50 | 323 | 100 | Plus |
MIP29201.pep Sequence
Translation from 182 to 334
> MIP29201.pep
MCCNPGGCCNLPSCIQCTNFCFNCWTGTAAVPCCRGSCIPGCSSSPGCRC
*
MIP29201.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42688-PB | 50 | CG42688-PB | 1..50 | 1..50 | 323 | 100 | Plus |
CG42688-PA | 50 | CG42688-PA | 1..50 | 1..50 | 323 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:56:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL21123-PA | 119 | GL21123-PA | 64..105 | 1..42 | 164 | 76.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:56:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA29078-PA | 117 | GA29078-PA | 62..103 | 1..42 | 165 | 76.2 | Plus |
Dpse\GA28761-PA | 119 | GA28761-PA | 64..105 | 1..42 | 164 | 76.2 | Plus |