Clone Sequence Records
MIP29308.complete Sequence
774 bp assembled on 2011-03-01
GenBank Submission: BT126242.1
> MIP29308.complete
TTTGGTTTTTCCCAAATCCTGTTCTTCAGTTTGCTGTATGTGTCCTGCAC
TCCCGACCATGGCAATAGTACCAATTACCAACATCCACTCTATACGAGTG
AATCCTCTCCAGGGTCTAGAATTCTTTTACGTTCCATTGCAGTATGGTGT
GCACTTGACCACGACTTTGATTTCGGCCATCGGGAACTTTTTGTATCGCC
TGTGGTCGCCGCCCTTGAGGAGAAGTTGTTGATCCCAATTTACAATTTCT
TTAGCCGATATGCTATTTGGATCTCTTTTGTAGATGCTATGTAGTTTTCT
GTAAGTTATTTCTAAACCGACCCACGGTGCCACAGATGCAGTAGAAGCCT
CAGCAAAGGAGAGGTTAAAGAAGCCAGACTTGGACACCAAATGGAATGCG
AAGCTGCGGAGGGACGCGATTCGAGCGAGGCAGATGAAGAAGATGTTAGC
CCAAGCGGATGCAGAAGTAAAGTACGAAGAGGACAAGGGTCCATGACCAG
GACCAGTCTGGACTGGAGGCGCTGCCATGGATCGGGAGGAGGTCGAGGAG
CAGCAGGGCGATGGGAATTCGAGAAGGGGCAGCATCATCAGCAACAGCAG
CATAAACAAAACGACCATCAGAGCCGCAGGAACGGAAGAACCATACACTG
GACGAAATCAAACCAAAGTAAGGAAGGATGATACTTCAAACTACTTTTAC
ATTTTGGACAATTAATAATATGCTGTGAAAAAATAAATAATATAAATAAA
AGTGTAAAAAAAAAAAAAAAAAAA
MIP29308.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18945015..18945769 | 1..755 | 3745 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:14:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18946328..18947083 | 1..756 | 3780 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18946328..18947083 | 1..756 | 3780 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 22:14:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2290..2416 | 519..643 | 161 | 60.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2256..2405 | 527..671 | 160 | 61.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6870 | 549..643 | 157 | 65.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2439 | 572..653 | 155 | 68.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1086..1162 | 546..621 | 147 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6804 | 575..643 | 140 | 68.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1083..1176 | 575..666 | 140 | 63.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2490..2539 | 580..628 | 139 | 78 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1092..1155 | 572..634 | 137 | 70.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2779..2858 | 566..644 | 136 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6825 | 575..643 | 131 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1238 | 569..753 | 128 | 55.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2401 | 579..645 | 125 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6843 | 575..643 | 124 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6796 | 581..656 | 121 | 63.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..6913 | 546..621 | 121 | 63.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2888 | 580..661 | 119 | 63.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6862 | 580..648 | 119 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6831..6896 | 581..641 | 119 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2368..2427 | 575..633 | 117 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2445 | 579..633 | 115 | 69.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6837 | 580..643 | 115 | 66.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6849..6898 | 572..621 | 115 | 70 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2277..2356 | 564..643 | 112 | 63.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1558..1601 | 575..617 | 109 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6797 | 567..641 | 109 | 63.7 | Plus |
MIP29308.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:15:49 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18945015..18945738 | 1..724 | 99 | -> | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 11:28:27 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42848-RA | 1..291 | 391..681 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 11:28:26 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42848-RA | 24..778 | 1..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:15:49 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:15:49 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:15:49 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:34 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:34 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:34 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18946328..18947082 | 1..755 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:00:10 Download gff for
MIP29308.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18946328..18947082 | 1..755 | 100 | | Plus |
MIP29308.hyp Sequence
Translation from 0 to 293
> MIP29308.hyp
FGFSQILFFSLLYVSCTPDHGNSTNYQHPLYTSESSPGSRILLRSIAVWC
ALDHDFDFGHRELFVSPVVAALEEKLLIPIYNFFSRYAIWISFVDAM*
Sequence MIP29308.hyp has no blast hits.
MIP29308.pep Sequence
Translation from 390 to 680
> MIP29308.pep
MECEAAEGRDSSEADEEDVSPSGCRSKVRRGQGSMTRTSLDWRRCHGSGG
GRGAAGRWEFEKGQHHQQQQHKQNDHQSRRNGRTIHWTKSNQSKEG*
Sequence MIP29308.pep has no blast hits.