MIP29309.complete Sequence
517 bp assembled on 2011-03-01
GenBank Submission: BT126310.1
> MIP29309.complete
AATCAGTTTGAGTAGATTCAGGCGAAAACAGACGTTTACCAGCTGTCTGC
TTCACTCGTCTCCAAAATTCAAAGTTTTTAAAAATAGAAAAAAAAAAAGT
GCCACTTCCAAGGAAACCAACAAATAGGCTTGCAGTTCCATCTCGCACCC
ATAATGGACCACTCATTTCCCAGCATGCCACCAAATATTTATCCGGAGTG
GAGTGACGCACGCACCTCAAGCATTAGCAATGGAAATCTCGTAGACCCAA
AACTAGACCTGTTCTTCCTGATGAGGTCATATCAGTTTCCACTGCCGCCT
CTCTACTCCCGTAGAGAATTTCGTTGGAGCCTCGAGGGATCTCCGCTGTC
GGACGACGAGAAACGTGCTTATAACGATTCCATGATCGAGTAATGTATGA
CGCTGGTGCAGATTGGCCCGCATTGGCCAGTGAACGTCGGGATTGAACTG
GAAATATTATTTCAATAGAGCAGCAGCACCTACTACCCACAAAAAAAAAA
AAAAAAAAAAAAAAAAA
MIP29309.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:15:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 2004761..2005246 | 488..1 | 2315 | 98.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:15:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2005208..2005699 | 492..1 | 2445 | 99.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 2005208..2005699 | 492..1 | 2445 | 99.7 | Minus |
Blast to na_te.dros performed on 2019-03-16 22:15:33 has no hits.
MIP29309.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:16:12 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 2004759..2005246 | 1..490 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 15:46:45 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RA | 1..240 | 154..393 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:53:16 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RB | 1..240 | 154..393 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:25:45 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RB | 1..240 | 154..393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 15:46:44 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RA | 1..442 | 49..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:53:16 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RB | 1..442 | 49..490 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:25:45 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42841-RB | 1..442 | 49..490 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:16:12 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2005210..2005699 | 1..490 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:16:12 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2005210..2005699 | 1..490 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:16:12 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2005210..2005699 | 1..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:53:16 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2005210..2005699 | 1..490 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:57:00 Download gff for
MIP29309.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2005210..2005699 | 1..490 | 99 | | Minus |
MIP29309.pep Sequence
Translation from 153 to 392
> MIP29309.pep
MDHSFPSMPPNIYPEWSDARTSSISNGNLVDPKLDLFFLMRSYQFPLPPL
YSRREFRWSLEGSPLSDDEKRAYNDSMIE*
MIP29309.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42841-PA | 79 | CG42841-PA | 1..79 | 1..79 | 428 | 100 | Plus |
CG42841-PB | 79 | CG42841-PB | 1..79 | 1..79 | 428 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:58:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13417-PA | 79 | GD13417-PA | 1..79 | 1..79 | 357 | 86.1 | Plus |
MIP29309.hyp Sequence
Translation from 153 to 392
> MIP29309.hyp
MDHSFPSMPPNIYPEWSDARTSSISNGNLVDPKLDLFFLMRSYQFPLPPL
YSRREFRWSLEGSPLSDDEKRAYNDSMIE*
MIP29309.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:01:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42841-PA | 79 | CG42841-PA | 1..79 | 1..79 | 428 | 100 | Plus |
CG42841-PB | 79 | CG42841-PB | 1..79 | 1..79 | 428 | 100 | Plus |