Clone Sequence Records
MIP29336.complete Sequence
532 bp assembled on 2011-03-01
GenBank Submission: BT126309.1
> MIP29336.complete
GAAAAAAACTAAGTTGGCATTTGCTACAAGTCAAAGGCATTTTTTAGCAC
TTATCAAAATGTCGTCCTCTTCTTCAGAAGCAATTCAACTTCAGACCAAC
GATGGTGTCATTCATACAGTGGACATGCGCTTTGCTCTACAGATATGCCC
CGTGCGCAATATGATAATGCAGGAGAGACAGAAAAATTTGCACACCGATG
ATGTTATCCCTCTACCGAGAGTCGATGCCAAAAACCTTCGATTTATAATC
AAGTGGTGGACATCTGTGCAGAATCTAGATGAAAATCTTCTCACTATGGG
CAAAAGAAAACTTAAGCAGTTGCTAACGGCGGAACATGCCAACCATCAGT
TTCTGCTGCAAATCATCCTTGCCGCCGACTATCTGCAAATGGAGAAATTT
TTGCTGATCAGCACACATCTCATGGCGGATGCTTTAAATGAATGTGAAAG
TGTCGAAGAGATACGTAGAAAGTTTTTTTGGAATAAAGTGTAAAATCATC
GATGGAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP29336.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:46:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 3713468..3713941 | 31..504 | 2310 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:46:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3714105..3714578 | 31..504 | 2370 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 3714105..3714578 | 31..504 | 2370 | 100 | Plus |
3L | 28103327 | 3L | 3714027..3714058 | 6..37 | 160 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-17 01:46:08 has no hits.
MIP29336.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:47:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 3713390..3713420 | 6..36 | 100 | -> | Plus |
chr3L | 3713474..3713941 | 37..505 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 10:32:32 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RA | 1..435 | 59..493 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:52:04 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RC | 1..435 | 59..493 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:10:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RC | 1..435 | 59..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 10:32:32 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RA | 46..525 | 25..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:52:04 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RC | 1..499 | 6..505 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:10:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43089-RC | 1..499 | 6..505 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3714111..3714578 | 37..505 | 99 | | Plus |
3L | 3714027..3714057 | 6..36 | 100 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3714111..3714578 | 37..505 | 99 | | Plus |
3L | 3714027..3714057 | 6..36 | 100 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:22 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3714111..3714578 | 37..505 | 99 | | Plus |
3L | 3714027..3714057 | 6..36 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:04 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3714027..3714057 | 6..36 | 100 | -> | Plus |
arm_3L | 3714111..3714578 | 37..505 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:49:12 Download gff for
MIP29336.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3714111..3714578 | 37..505 | 99 | | Plus |
3L | 3714027..3714057 | 6..36 | 100 | -> | Plus |
MIP29336.pep Sequence
Translation from 1 to 492
> MIP29336.pep
KKTKLAFATSQRHFLALIKMSSSSSEAIQLQTNDGVIHTVDMRFALQICP
VRNMIMQERQKNLHTDDVIPLPRVDAKNLRFIIKWWTSVQNLDENLLTMG
KRKLKQLLTAEHANHQFLLQIILAADYLQMEKFLLISTHLMADALNECES
VEEIRRKFFWNKV*
MIP29336.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF24221-PA | 155 | GF24221-PA | 14..142 | 28..158 | 171 | 31.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:55:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH16422-PA | 160 | GH16422-PA | 4..147 | 24..158 | 165 | 27.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43089-PB | 144 | CG43089-PB | 1..144 | 20..163 | 739 | 100 | Plus |
CG43089-PC | 144 | CG43089-PC | 1..144 | 20..163 | 739 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:55:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI12503-PA | 151 | GI12503-PA | 2..141 | 28..158 | 171 | 28.6 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:55:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ12411-PA | 159 | GJ12411-PA | 2..149 | 22..158 | 185 | 29.7 | Plus |
MIP29336.hyp Sequence
Translation from 7 to 492
> MIP29336.hyp
TKLAFATSQRHFLALIKMSSSSSEAIQLQTNDGVIHTVDMRFALQICPVR
NMIMQERQKNLHTDDVIPLPRVDAKNLRFIIKWWTSVQNLDENLLTMGKR
KLKQLLTAEHANHQFLLQIILAADYLQMEKFLLISTHLMADALNECESVE
EIRRKFFWNKV*
MIP29336.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:00:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43089-PB | 144 | CG43089-PB | 1..144 | 18..161 | 739 | 100 | Plus |
CG43089-PC | 144 | CG43089-PC | 1..144 | 18..161 | 739 | 100 | Plus |