Clone Sequence Records
MIP29367.complete Sequence
487 bp assembled on 2011-03-01
GenBank Submission: BT126111.1
> MIP29367.complete
AGCGATGGGGCTTTTGGAAAACCCAAAGATCTATAAAATATTCTAGGGTA
TTTTCTGTTACTCCCGTGTTATTCACCGTCGAGATGAAAAGATGCAGCCG
TATAAATCGCACTGGAATTGAGCGATCGCAGTTATTGACTCGTCTCAATT
GTCGCAGCGATGAAGTGGTTTTCGATTTTGTTTGCGCTACTGGCGCTCAT
TTTCTTCGTCGAATTTGGATATGCTCGAACAATTCCCAGGATTACCATTC
GCAATGGCGACATTATAGTTCATGGCAATTGCAATGACTGCACGGCACGC
GCCACCAAAAACTCGGCTCACTTATCAATCAAATTTACTCGAAGATGGTA
AATGTATTTATAAATAAATTACCTCAAACTTGCCATATTAAAACAAAAAA
CAAAAACTAATTTAAACTACTAAGTATTAGCTTGTGTGCATAAAATAAAA
AGAAGTAACTATTATGCTAAAAAAAAAAAAAAAAAAA
MIP29367.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:46:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 14268430..14268671 | 468..227 | 1180 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 14268733..14268959 | 227..1 | 1090 | 98.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:46:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18381390..18381634 | 471..227 | 1225 | 100 | Minus |
2R | 25286936 | 2R | 18381696..18381922 | 227..1 | 1135 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 18382589..18382833 | 471..227 | 1225 | 100 | Minus |
2R | 25260384 | 2R | 18382895..18383121 | 227..1 | 1135 | 100 | Minus |
Blast to na_te.dros performed 2019-03-17 01:46:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 2562..2664 | 353..450 | 124 | 62.1 | Plus |
MIP29367.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:47:38 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 14268430..14268671 | 227..468 | 99 | <- | Minus |
chr2R | 14268734..14268959 | 1..226 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 11:23:06 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42737-RA | 1..204 | 84..287 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:52:32 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..192 | 160..351 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:11:00 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..192 | 160..351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 11:23:05 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42737-RA | 1..209 | 79..287 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:52:32 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..390 | 79..468 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:11:00 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43202-RA | 1..390 | 79..468 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:38 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18381393..18381634 | 227..468 | 100 | <- | Minus |
2R | 18381697..18381922 | 1..226 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:38 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18381393..18381634 | 227..468 | 100 | <- | Minus |
2R | 18381697..18381922 | 1..226 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:38 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18381393..18381634 | 227..468 | 100 | <- | Minus |
2R | 18381697..18381922 | 1..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:32 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14268898..14269139 | 227..468 | 100 | <- | Minus |
arm_2R | 14269202..14269427 | 1..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:00:09 Download gff for
MIP29367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18382592..18382833 | 227..468 | 100 | <- | Minus |
2R | 18382896..18383121 | 1..226 | 100 | | Minus |
MIP29367.pep Sequence
Translation from 2 to 286
> MIP29367.pep
RWGFWKTQRSIKYSRVFSVTPVLFTVEMKRCSRINRTGIERSQLLTRLNC
RSDEVVFDFVCATGAHFLRRIWICSNNSQDYHSQWRHYSSWQLQ*
Sequence MIP29367.pep has no blast hits.
MIP29367.hyp Sequence
Translation from 2 to 286
> MIP29367.hyp
RWGFWKTQRSIKYSRVFSVTPVLFTVEMKRCSRINRTGIERSQLLTRLNC
RSDEVVFDFVCATGAHFLRRIWICSNNSQDYHSQWRHYSSWQLQ*
Sequence MIP29367.hyp has no blast hits.