Clone Sequence Records
MIP29370.complete Sequence
429 bp assembled on 2011-03-01
GenBank Submission: BT126106.1
> MIP29370.complete
AGTCGCCAGTCTATTGTTTCCCAATGCGGTTGATTTTTTTCTGCTTGTGC
CTCTTTTTGTCCCTGGAGCTAGTAGTGCCCAGACATGTCGTGGGCCACGA
TGGATACCACAACATCGAGAAGGAAAAGCGCTGGAAAAACTGGCCAGCAC
GTGTGAGGCACCACCATAAACAACGTAACTCCATCTGATGTCCGACAAGG
TTGGGATTGCACGCGATTACTTATGGCCCGTTGCAAAGTCGTTCACAGGG
CCATAATGCCTCGGATCTCGCCAGACAATGGGAAGCGGAAGCCTTGTTCA
TCATATCAATGGATCACTGCTTAATTGAACATTTCCACTGTTCGAATGTG
TAAATAATAAATTGAATCGCATTAATTGTTGCTATCCAAGCGATATACAT
TTCAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP29370.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 19959565..19959921 | 403..47 | 1770 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 19959980..19960026 | 47..1 | 220 | 97.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19961221..19961580 | 406..47 | 1800 | 100 | Minus |
2L | 23513712 | 2L | 19961639..19961685 | 47..1 | 235 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:02:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19961221..19961580 | 406..47 | 1800 | 100 | Minus |
2L | 23513712 | 2L | 19961639..19961685 | 47..1 | 235 | 100 | Minus |
Blast to na_te.dros performed 2019-03-17 01:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3002..3041 | 131..172 | 115 | 78.6 | Plus |
MIP29370.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:47:25 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 19959565..19959920 | 48..403 | 99 | <- | Minus |
chr2L | 19959980..19960026 | 1..47 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 10:32:34 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..165 | 24..188 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:52:08 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..165 | 24..188 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:10:29 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..165 | 24..188 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 10:32:34 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..353 | 24..376 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:52:08 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..403 | 1..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:10:29 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42866-RA | 1..403 | 1..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:25 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19961224..19961579 | 48..403 | 100 | <- | Minus |
2L | 19961639..19961685 | 1..47 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:25 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19961224..19961579 | 48..403 | 100 | <- | Minus |
2L | 19961639..19961685 | 1..47 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:25 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19961224..19961579 | 48..403 | 100 | <- | Minus |
2L | 19961639..19961685 | 1..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:08 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19961224..19961579 | 48..403 | 100 | <- | Minus |
arm_2L | 19961639..19961685 | 1..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:49:15 Download gff for
MIP29370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19961224..19961579 | 48..403 | 100 | <- | Minus |
2L | 19961639..19961685 | 1..47 | 100 | | Minus |
MIP29370.hyp Sequence
Translation from 2 to 187
> MIP29370.hyp
SPVYCFPMRLIFFCLCLFLSLELVVPRHVVGHDGYHNIEKEKRWKNWPAR
VRHHHKQRNSI*
MIP29370.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:00:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42866-PA | 54 | CG42866-PA | 1..54 | 8..61 | 306 | 100 | Plus |
MIP29370.pep Sequence
Translation from 2 to 187
> MIP29370.pep
SPVYCFPMRLIFFCLCLFLSLELVVPRHVVGHDGYHNIEKEKRWKNWPAR
VRHHHKQRNSI*
MIP29370.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42866-PA | 54 | CG42866-PA | 1..54 | 8..61 | 306 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:55:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16977-PA | 54 | GM16977-PA | 19..54 | 26..61 | 169 | 88.9 | Plus |
Dsec\GM18814-PA | 101 | GM18814-PA | 1..42 | 8..49 | 131 | 88.1 | Plus |
Dsec\GM11934-PA | 101 | GM11934-PA | 1..42 | 8..49 | 131 | 88.1 | Plus |