MIP29410.complete Sequence
434 bp assembled on 2011-03-01
GenBank Submission: BT126107.1
> MIP29410.complete
ACTCTTCAAATTTAGCCTTCAAAATGATCAAGTTTTTTGCCGTGGTTGTC
TTGCTGGCCATAAGTCCGCTATCGTCTGATTCTACTCTAATTGACATTGT
GTCTAGTTGTATAAATTTTCAGTTTAAGGCATTACTATACCTTGCGGAAT
CAACTGATGATAAATTTCATTGTATTGAAACATGTGTATATGATATTATC
AGAAATCTTACAAAGATTGATCTACCTAAACGCCCGGATCCCGAAATATG
TCAAGGCTTAAATGACAAATGTAAGTACGCCGAAGGATTACGAAAGTGTC
TTCCACCAAATTTAGATGAAAGATTTTGGAAAGATGTTTTTACACGAATA
TAAACTTTAGACTAAACTTGTAACTTTGGTACAATAAAATAATAAATCTC
GCTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP29410.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:46:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 10900300..10900616 | 406..90 | 1585 | 100 | Minus |
chr2R | 21145070 | chr2R | 10900688..10900776 | 89..1 | 445 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:46:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15013041..15013362 | 411..90 | 1595 | 99.7 | Minus |
2R | 25286936 | 2R | 15013434..15013522 | 89..1 | 445 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:02:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 15014240..15014561 | 411..90 | 1595 | 99.6 | Minus |
2R | 25260384 | 2R | 15014633..15014721 | 89..1 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-17 01:46:15 has no hits.
MIP29410.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:47:26 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 10900299..10900616 | 90..407 | 99 | <- | Minus |
chr2R | 10900688..10900776 | 1..89 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-01 10:32:35 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..330 | 24..353 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:52:10 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..330 | 24..353 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:10:32 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..330 | 24..353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-01 10:32:35 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..330 | 24..353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:52:10 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..406 | 1..406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:10:32 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..405 | 1..405 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:26 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15013045..15013362 | 90..407 | 99 | <- | Minus |
2R | 15013434..15013522 | 1..89 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:26 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15013045..15013362 | 90..407 | 99 | <- | Minus |
2R | 15013434..15013522 | 1..89 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:47:26 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15013045..15013362 | 90..407 | 99 | <- | Minus |
2R | 15013434..15013522 | 1..89 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:52:10 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10900550..10900867 | 90..407 | 99 | <- | Minus |
arm_2R | 10900939..10901027 | 1..89 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:49:16 Download gff for
MIP29410.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15014244..15014561 | 90..407 | 99 | <- | Minus |
2R | 15014633..15014721 | 1..89 | 100 | | Minus |
MIP29410.hyp Sequence
Translation from 2 to 352
> MIP29410.hyp
SSNLAFKMIKFFAVVVLLAISPLSSDSTLIDIVSSCINFQFKALLYLAES
TDDKFHCIETCVYDIIRNLTKIDLPKRPDPEICQGLNDKCKYAEGLRKCL
PPNLDERFWKDVFTRI*
MIP29410.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43101-PA | 109 | CG43101-PA | 1..109 | 8..116 | 577 | 100 | Plus |
MIP29410.pep Sequence
Translation from 23 to 352
> MIP29410.pep
MIKFFAVVVLLAISPLSSDSTLIDIVSSCINFQFKALLYLAESTDDKFHC
IETCVYDIIRNLTKIDLPKRPDPEICQGLNDKCKYAEGLRKCLPPNLDER
FWKDVFTRI*
MIP29410.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43101-PA | 109 | CG43101-PA | 1..109 | 1..109 | 577 | 100 | Plus |