MIP29913.complete Sequence
426 bp assembled on 2011-03-30
GenBank Submission: BT126237.1
> MIP29913.complete
TTCCACACGACAAACGTCTTTCAAGATGAAGCTACTTCTTCCTTTGACTT
TGGCAGTGATTGCCATTTGCTGCATGTCCTTTATTGAGTGCGCCTCGTCG
GGCGACACAGCAACCAAAACTGGGACAGGCACTGGAACTGGAACTGGTAC
CGGCACCGGCACCGGCACCGGAACAGCCACCACATCGACAACTGTTGCTC
CAACAACCACCTCTACCACGACCGCAGAAGCGACCGTGCACCACAGAAGG
ATACATCGGCGCAGGCGTCGCAACCTAAGGAGACTCCGACACAGGCGCGC
AGAGGCCGAGCGAAGACGCCGATTGGGCTAGTCGGTAAAAAGTTTACCTT
ACATTTTTCAAAGCCTGCAGACATGTAAATCCACGCTTTTCCGAAATAAA
GTTTCTTTAAAAAAAAAAAAAAAAAA
MIP29913.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 17780678..17781085 | 408..1 | 2040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17791072..17791486 | 415..1 | 2075 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 17784172..17784586 | 415..1 | 2075 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 22:53:33 has no hits.
MIP29913.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:54:14 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 17780678..17781085 | 1..408 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-04 11:17:19 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..306 | 26..331 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:00:10 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..306 | 26..331 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:32:26 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..306 | 26..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-04 11:17:19 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..306 | 26..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:00:10 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..408 | 1..408 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:32:26 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42815-RA | 1..408 | 1..408 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:54:14 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17791079..17791486 | 1..408 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:54:14 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17791079..17791486 | 1..408 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:54:14 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17791079..17791486 | 1..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:00:10 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17784179..17784586 | 1..408 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:03:53 Download gff for
MIP29913.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17784179..17784586 | 1..408 | 100 | | Minus |
MIP29913.hyp Sequence
Translation from 0 to 330
> MIP29913.hyp
STRQTSFKMKLLLPLTLAVIAICCMSFIECASSGDTATKTGTGTGTGTGT
GTGTGTGTATTSTTVAPTTTSTTTAEATVHHRRIHRRRRRNLRRLRHRRA
EAERRRRLG*
MIP29913.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:18:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42815-PA | 101 | CG32186-PA | 1..101 | 9..109 | 517 | 100 | Plus |
CG32073-PB | 109 | CG32073-PB | 1..108 | 9..107 | 214 | 46.8 | Plus |
CG32073-PA | 109 | CG32073-PA | 1..108 | 9..107 | 214 | 46.8 | Plus |
CG32453-PB | 120 | CG32453-PB | 1..104 | 9..108 | 138 | 35.2 | Plus |
CG32453-PA | 120 | CG32453-PA | 1..104 | 9..108 | 138 | 35.2 | Plus |
MIP29913.pep Sequence
Translation from 1 to 330
> MIP29913.pep
STRQTSFKMKLLLPLTLAVIAICCMSFIECASSGDTATKTGTGTGTGTGT
GTGTGTGTATTSTTVAPTTTSTTTAEATVHHRRIHRRRRRNLRRLRHRRA
EAERRRRLG*
MIP29913.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42815-PA | 101 | CG32186-PA | 1..101 | 9..109 | 517 | 100 | Plus |
CG32073-PB | 109 | CG32073-PB | 1..108 | 9..107 | 214 | 46.8 | Plus |
CG32073-PA | 109 | CG32073-PA | 1..108 | 9..107 | 214 | 46.8 | Plus |
per-PB | 1218 | CG2647-PB | 693..740 | 31..78 | 145 | 62.5 | Plus |
per-PA | 1218 | CG2647-PA | 693..740 | 31..78 | 145 | 62.5 | Plus |
CG14454-PB | 120 | CG14454-PB | 1..104 | 9..108 | 138 | 35.2 | Plus |
CG14454-PA | 120 | CG14454-PA | 1..104 | 9..108 | 138 | 35.2 | Plus |
CG32453-PB | 120 | CG32453-PB | 1..104 | 9..108 | 138 | 35.2 | Plus |
CG32453-PA | 120 | CG32453-PA | 1..104 | 9..108 | 138 | 35.2 | Plus |
CG32071-PA | 150 | CG32071-PA | 17..115 | 9..107 | 136 | 33.3 | Plus |