Clone MIP29934 Report

Search the DGRC for MIP29934

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:299
Well:34
Vector:pOT2
Associated Gene/TranscriptCG11029-RA
Protein status:MIP29934.pep: gold
Sequenced Size:1822

Clone Sequence Records

MIP29934.complete Sequence

1822 bp assembled on 2011-04-05

GenBank Submission: BT126296.1

> MIP29934.complete
CCTGTCGGATGAGAACGCGTTCAGAAGTTCATCGGGTATGAGCTTGCGAA
AGTATATCCGAATGGATAAGAACTCAAACTAAATCTCTTGATTTTCGATA
AAAAACAAAATATATCCGATATGGCTAGCATTACCTATGCATTGTGTCTG
TGCTCGTTGTTTATATTATTCTCGCCTCTTGTGTCCGCGAATCGGCGTGT
CCGGCGACAAAATCGATCCGATCGCCTGCTGGCCGACATCGGAGTACGTG
CCCAGTCCTACGATCCCCGTGTGCCGGAAAATGGCATTCAGCAGTACACC
GACATCGACCAGGATCTGCGCCATCTGTTCCTGAACACCAGGCAGACCAC
GCTGAAATGGGCCCTTAACAACATCGAGGCGCTGAGCAGTCGCGGCAGAC
GCGAGGGAAAGCTCCAGGCTCCGGTGTCCAAGAAGGTGCCCTTCCTGTGT
CCCACTAACAACACACGCTCCCCGAGTCCGCCCACTTCCATAGAGCACCT
CAGGCCGGGTGATATTGACATCATAGCTGCCTTTGGCGACTCCCTGTCCG
CAGGCAACGGAATACTTTCCAACAATGCCATCGACATGATCAACGAGTTC
CGTGGTCTGACCTTCTCCGGTGGCGGTCTGGCCAACTGGCGAAGATTCGT
CACCCTGCCGAACATCCTGAAGATCTTTAATCCCAAACTGTACGGTTTCG
CGGTGAGCAACAGCCTGGTGATCAACCACCGATCGTCGCGACTTAACATC
GCCGAGCCGATGATCATGTCGCGGGATCTGCCCTTCCAGGCTCGCGTACT
CATCGATCTGCTGCGACGCGATCGCCATGTGGACATGAAGCGGCACTGGA
AGCTGTTGACAGTGTATGTGGGAAACAACGACATCTGCTCCGACCTGTGT
CACTGGGACACGCCGCAGAGCTTCCTCGATCAGCACGCCCGCGATCTGCG
CCAGGCATTCCGGCTGCTGCGCGACCATGTGCCGCGCCTGCTTATCAATT
TAATTGTGGTGCCAAACATCCCGCTGGTGTTGAGCACCATGACCAAAGTG
CCGCTGCAGTGCTTCGTGGTGCATCGTGTGGGGTGCCACTGTCTGATCAA
CGACCGCCTGAACCGCACCGAGTTCAATGAGCGCATGGACACCCTGACGC
GTTGGCAGCAGCTGGACATGGAGATCGCCCGGCTGCCGGAGTTCCGTCGC
CAGGACTTCGCCATCGTCGCCCATCCGATGCTGACCAAACTAACTGCTCC
CACTTTGCCCGATGGGAGCACGGACTGGAGGTTCTTCTCTCACGACTGCT
TCCATTTTAGCCAGCGCGGCCACGCGATCATCTCGAACCTGTTGTGGAAC
AGCATGCTCCTGCCGGACGACCAGAAGCCACGACCTTCGGTGGTGCCCGA
GCTGTTCGAGCGGGTCGTTTGCCCCACTGCGGAGCAGCCCTACCTTGTGG
TCAGGCCAAGTTGAGGGTCTCCCAAGATCGGGAACGGGTTAAGTTACTTG
GTTTGGCTGTCTGGTTACCCTTTTCTTGGCGTAACCGCAGTCTGGTGTGC
ACAGAGAAAAATTGCTTTTTATTCGCATATCAAATTATAGAAGTCTAGGT
ACTCTTCATAATTCATAATAAATTATTATTATTTATAACCATAATATATA
AACAATCCACTTCCACTTCCGCAAATCTCTTTGCGGAATGCATTGGATAG
TGCAAAGGAAACTCGAAGGATTTTGTTCACAAAATAAAATTTGATCTTTG
ACATTGCAAATAAATAAAAATATATTTGTCAAGATGTCAAAAACCTAAAA
AGATTAAAAAAAAAAAAAAAAA

MIP29934.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5745252..5747056 1..1805 8965 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5746157..5747964 1..1808 9040 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5746157..5747964 1..1808 9040 100 Plus
Blast to na_te.dros performed 2019-03-16 23:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1293..1383 1710..1804 131 64.2 Plus
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1153..1259 1566..1664 120 61.7 Plus
Burdock 6411 Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). 445..537 1558..1649 118 66.7 Plus

MIP29934.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:15:47 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5745252..5747056 1..1805 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:18 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1344 121..1464 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:04:36 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1344 121..1464 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:10 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1344 121..1464 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:17 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1344 121..1464 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:04:36 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1805 1..1805 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:10 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
CG11029-RA 1..1805 1..1805 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:47 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5746157..5747961 1..1805 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:47 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5746157..5747961 1..1805 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:47 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5746157..5747961 1..1805 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:04:36 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5746157..5747961 1..1805 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:01 Download gff for MIP29934.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5746157..5747961 1..1805 100   Plus

MIP29934.hyp Sequence

Translation from 120 to 1463

> MIP29934.hyp
MASITYALCLCSLFILFSPLVSANRRVRRQNRSDRLLADIGVRAQSYDPR
VPENGIQQYTDIDQDLRHLFLNTRQTTLKWALNNIEALSSRGRREGKLQA
PVSKKVPFLCPTNNTRSPSPPTSIEHLRPGDIDIIAAFGDSLSAGNGILS
NNAIDMINEFRGLTFSGGGLANWRRFVTLPNILKIFNPKLYGFAVSNSLV
INHRSSRLNIAEPMIMSRDLPFQARVLIDLLRRDRHVDMKRHWKLLTVYV
GNNDICSDLCHWDTPQSFLDQHARDLRQAFRLLRDHVPRLLINLIVVPNI
PLVLSTMTKVPLQCFVVHRVGCHCLINDRLNRTEFNERMDTLTRWQQLDM
EIARLPEFRRQDFAIVAHPMLTKLTAPTLPDGSTDWRFFSHDCFHFSQRG
HAIISNLLWNSMLLPDDQKPRPSVVPELFERVVCPTAEQPYLVVRPS*

MIP29934.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11029-PA 447 CG11029-PA 1..447 1..447 2359 100 Plus
CG7365-PB 424 CG7365-PB 23..411 58..445 734 38.9 Plus
CG7365-PA 424 CG7365-PA 23..411 58..445 734 38.9 Plus

MIP29934.pep Sequence

Translation from 120 to 1463

> MIP29934.pep
MASITYALCLCSLFILFSPLVSANRRVRRQNRSDRLLADIGVRAQSYDPR
VPENGIQQYTDIDQDLRHLFLNTRQTTLKWALNNIEALSSRGRREGKLQA
PVSKKVPFLCPTNNTRSPSPPTSIEHLRPGDIDIIAAFGDSLSAGNGILS
NNAIDMINEFRGLTFSGGGLANWRRFVTLPNILKIFNPKLYGFAVSNSLV
INHRSSRLNIAEPMIMSRDLPFQARVLIDLLRRDRHVDMKRHWKLLTVYV
GNNDICSDLCHWDTPQSFLDQHARDLRQAFRLLRDHVPRLLINLIVVPNI
PLVLSTMTKVPLQCFVVHRVGCHCLINDRLNRTEFNERMDTLTRWQQLDM
EIARLPEFRRQDFAIVAHPMLTKLTAPTLPDGSTDWRFFSHDCFHFSQRG
HAIISNLLWNSMLLPDDQKPRPSVVPELFERVVCPTAEQPYLVVRPS*

MIP29934.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:44:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15578-PA 447 GF15578-PA 1..447 1..447 1696 70.8 Plus
Dana\GF25210-PA 425 GF25210-PA 63..416 91..445 768 42.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25093-PA 447 GG25093-PA 1..447 1..447 2167 93.1 Plus
Dere\GG13344-PA 420 GG13344-PA 23..411 58..445 765 40 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11045-PA 448 GH11045-PA 25..448 26..447 1592 68.4 Plus
Dgri\GH11044-PA 431 GH11044-PA 27..428 31..442 928 44.8 Plus
Dgri\GH11043-PA 434 GH11043-PA 23..427 31..442 831 40.8 Plus
Dgri\GH16351-PA 427 GH16351-PA 30..418 58..445 754 40.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG11029-PA 447 CG11029-PA 1..447 1..447 2359 100 Plus
CG7365-PB 424 CG7365-PB 23..411 58..445 734 38.9 Plus
CG7365-PA 424 CG7365-PA 23..411 58..445 734 38.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17561-PA 449 GI17561-PA 27..449 26..447 1411 62.6 Plus
Dmoj\GI17560-PA 436 GI17560-PA 24..429 30..442 844 41.1 Plus
Dmoj\GI11544-PA 426 GI11544-PA 29..417 58..445 773 40.9 Plus
Dmoj\GI17562-PA 91 GI17562-PA 10..91 329..413 231 49.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19030-PA 448 GL19030-PA 17..448 17..447 1788 75.7 Plus
Dper\GL24839-PA 439 GL24839-PA 23..276 58..305 522 41.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10715-PA 448 GA10715-PA 17..448 17..447 1789 75.7 Plus
Dpse\GA20299-PA 420 GA20299-PA 23..411 58..445 761 39.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18569-PA 447 GM18569-PA 1..447 1..447 2318 97.5 Plus
Dsec\GM22250-PA 404 GM22250-PA 88..395 116..445 727 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23360-PA 447 GD23360-PA 1..447 1..447 2317 97.3 Plus
Dsim\GD12222-PA 420 GD12222-PA 88..411 116..445 754 43.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15636-PA 445 GJ15636-PA 12..445 13..447 1534 66.7 Plus
Dvir\GJ15626-PA 431 GJ15626-PA 26..430 31..444 937 45.2 Plus
Dvir\GJ15616-PA 438 GJ15616-PA 17..431 24..442 826 42.9 Plus
Dvir\GJ11563-PA 425 GJ11563-PA 28..416 58..445 741 40.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19027-PA 350 GK19027-PA 1..350 98..447 1514 77.1 Plus
Dwil\GK14690-PA 389 GK14690-PA 3..377 59..439 899 46.5 Plus
Dwil\GK14691-PA 432 GK14691-PA 22..432 31..445 868 42.6 Plus
Dwil\GK17043-PA 425 GK17043-PA 63..416 91..445 764 42.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25603-PA 447 GE25603-PA 1..447 1..447 2313 97.1 Plus
Dyak\GE23232-PA 420 GE23232-PA 88..411 116..445 740 42.9 Plus
Dyak\GE22757-PA 311 GE22757-PA 2..302 139..445 665 41.6 Plus