Clone Sequence Records
MIP30027.complete Sequence
590 bp assembled on 2011-04-04
GenBank Submission: BT126205.1
> MIP30027.complete
AGAATACTTGCAAACATGGAGGCGATTTATCAATTGGTCGTAATCTTAGC
TATTATTTTTGGGCATCTGCAGTTCCAGTCCACGGTGTTAGCTGACCCTG
CTTTTCGTCGCCCAAATGCCATCGCGCCCGCCCGCACCTATAGCGGTGTA
TACAACCACTCGACGATTCACAGAGCTGTCGAAAAGTCCAATTTGACTGC
CCCGGCGGTTCACCAACCTGTCCTCCAGGCACCCGGATTTATAATACCAT
ATCAGAACCGTTCGTTGGTTCACGCCAATCAGGGATCTCATGGCGTTTTA
CCAGGTAGCGTTCCAGCGCAAGATTCAGGTCCTTCCAGCGTCTGGGTGGC
CAGTAATAATCACCAACCAGGAGTAACTGGCGTTCTTCAACCAAACCCAT
CCCAAGGTAAAATCGTAAATCCACCATTTGTCATTGGCAAAAATAATGGA
TCGTTTTATTCAACCTATAATGCAACAGTCCCTGGCAGGACTTATCCTTA
TGGAAACCTTTCCATTTGAGCAATTATAAAATTTTACCAAAACCCAATAA
ACCAAATTAAGATTAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP30027.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:55:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 230926..231442 | 564..48 | 2585 | 100 | Minus |
chr3L | 24539361 | chr3L | 231511..231559 | 49..1 | 245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 230970..231487 | 565..48 | 2590 | 100 | Minus |
3L | 28110227 | 3L | 231556..231604 | 49..1 | 245 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 230970..231487 | 565..48 | 2590 | 100 | Minus |
3L | 28103327 | 3L | 231556..231604 | 49..1 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 22:55:06 has no hits.
MIP30027.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:55:53 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 230926..231440 | 50..564 | 100 | <- | Minus |
chr3L | 231511..231559 | 1..49 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-04 11:17:31 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..504 | 16..519 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:00:55 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..504 | 16..519 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:33:11 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..504 | 16..519 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-04 11:17:31 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..504 | 16..519 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:00:55 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..564 | 1..564 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:11 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42846-RA | 1..564 | 1..564 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:53 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230971..231485 | 50..564 | 100 | <- | Minus |
3L | 231556..231604 | 1..49 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:53 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230971..231485 | 50..564 | 100 | <- | Minus |
3L | 231556..231604 | 1..49 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:53 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230971..231485 | 50..564 | 100 | <- | Minus |
3L | 231556..231604 | 1..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:00:55 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 230971..231485 | 50..564 | 100 | <- | Minus |
arm_3L | 231556..231604 | 1..49 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:04:20 Download gff for
MIP30027.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 230971..231485 | 50..564 | 100 | <- | Minus |
3L | 231556..231604 | 1..49 | 100 | | Minus |
MIP30027.hyp Sequence
Translation from 0 to 518
> MIP30027.hyp
RILANMEAIYQLVVILAIIFGHLQFQSTVLADPAFRRPNAIAPARTYSGV
YNHSTIHRAVEKSNLTAPAVHQPVLQAPGFIIPYQNRSLVHANQGSHGVL
PGSVPAQDSGPSSVWVASNNHQPGVTGVLQPNPSQGKIVNPPFVIGKNNG
SFYSTYNATVPGRTYPYGNLSI*
MIP30027.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42846-PA | 167 | CG42846-PA | 1..167 | 6..172 | 879 | 100 | Plus |
MIP30027.pep Sequence
Translation from 0 to 518
> MIP30027.pep
RILANMEAIYQLVVILAIIFGHLQFQSTVLADPAFRRPNAIAPARTYSGV
YNHSTIHRAVEKSNLTAPAVHQPVLQAPGFIIPYQNRSLVHANQGSHGVL
PGSVPAQDSGPSSVWVASNNHQPGVTGVLQPNPSQGKIVNPPFVIGKNNG
SFYSTYNATVPGRTYPYGNLSI*
MIP30027.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14676-PA | 274 | GG14676-PA | 117..274 | 17..172 | 512 | 65.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42846-PA | 167 | CG42846-PA | 1..167 | 6..172 | 879 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:38:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14292-PA | 424 | GM14292-PA | 269..424 | 17..170 | 644 | 83.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:38:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13530-PA | 426 | GD13530-PA | 269..426 | 17..172 | 651 | 83.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:38:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21037-PA | 433 | GE21037-PA | 273..433 | 17..172 | 456 | 60.8 | Plus |