Clone Sequence Records
MIP30042.complete Sequence
896 bp assembled on 2011-04-05
GenBank Submission: BT126301.1
> MIP30042.complete
ATAACATCACCGGTTGGTTATCCGTTTTAATACAACCTAAATTACAGATA
GAAACTAACAAAAAGTCAGGCCCAAAATGTGGAACTATCGTCAGAAAGTT
GATTTGGAAACATCGGTAAAGATATCGCCGTATTGCAATTCTTGGCCATC
GGCTTGTTGGTTTACTCTTAAAGGCATTGATTTGTTGAAACTTCTGGTAT
TGGAAAGATCACCAACTTACCTGGTGATTCTTACGATTGTCCTTATCGTA
CTCCTCTTACTTGTATTTAAAAGATTCAAACACAAATGGAACGATGTGCC
TATGTCGGAGATTGAGTCACTGAGAAAACGTGTTAAGTTTGTAACCAAGG
ATATGGCCATGCTGCAAGAAGCCCTAAATTCGACCGTAATACCCAAGCCG
CCGCTAGCGATTTCTGATGATATTAGGAGTAATATTAATTACTTGGATGA
ACCAGAGTCCAACGCAAATGATGACAAACTTTCAGAATTTAAAGAAATCT
TTGATCCTTTCCCCCCAGAATTCGACAAAATTAGTGAAACTAAAGCGCTA
GTACGAGAAGAAAATAAACCGGAGCCTGTGATTCCAGACGCCGAACCTCG
AGAAGATTCCGTAGTAAAAAATAGGGTGCGATTTGCTCTAACAGATCAGG
GAAAACCAGCCAAAGATGAGACCAAGCACATTAATATAGCGAAACCCACG
AAGATTATAGCTGAAAATAATGTATCCGTGGAAAATAGAAATATGCGTAA
ACGGTCATCTCCTTCAAACACGAAAACGGGATGGAAGCTCTAGATCTATT
TTCAGGAATTTTCATATTGAAATTTCATTAAAATTGTAGTGCTCGAATTT
GTAATAAACCATTCATAGTGATTTGTATAAAAAAAAAAAAAAAAAA
MIP30042.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:14:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 14193856..14194438 | 296..878 | 2885 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 14193502..14193798 | 1..297 | 1470 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:14:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14203712..14204298 | 296..882 | 2935 | 100 | Plus |
3L | 28110227 | 3L | 14203358..14203654 | 1..297 | 1485 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 14196812..14197398 | 296..882 | 2935 | 100 | Plus |
3L | 28103327 | 3L | 14196458..14196754 | 1..297 | 1485 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 23:14:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 766..816 | 456..507 | 113 | 71.2 | Plus |
MIP30042.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:15:56 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 14193502..14193796 | 1..295 | 99 | -> | Plus |
chr3L | 14193856..14194438 | 296..878 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:23 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 1..717 | 77..793 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:04:57 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 1..717 | 77..793 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:30 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 1..717 | 77..793 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:23 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 1..717 | 77..793 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:04:57 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 36..913 | 1..878 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:30 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32141-RA | 36..913 | 1..878 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:56 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14203358..14203652 | 1..295 | 100 | -> | Plus |
3L | 14203712..14204294 | 296..878 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:56 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14203358..14203652 | 1..295 | 100 | -> | Plus |
3L | 14203712..14204294 | 296..878 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:56 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14203358..14203652 | 1..295 | 100 | -> | Plus |
3L | 14203712..14204294 | 296..878 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:04:57 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14196458..14196752 | 1..295 | 100 | -> | Plus |
arm_3L | 14196812..14197394 | 296..878 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:11 Download gff for
MIP30042.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14196458..14196752 | 1..295 | 100 | -> | Plus |
3L | 14196812..14197394 | 296..878 | 100 | | Plus |
MIP30042.pep Sequence
Translation from 76 to 792
> MIP30042.pep
MWNYRQKVDLETSVKISPYCNSWPSACWFTLKGIDLLKLLVLERSPTYLV
ILTIVLIVLLLLVFKRFKHKWNDVPMSEIESLRKRVKFVTKDMAMLQEAL
NSTVIPKPPLAISDDIRSNINYLDEPESNANDDKLSEFKEIFDPFPPEFD
KISETKALVREENKPEPVIPDAEPREDSVVKNRVRFALTDQGKPAKDETK
HINIAKPTKIIAENNVSVENRNMRKRSSPSNTKTGWKL*
MIP30042.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:45:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15677-PA | 215 | GG15677-PA | 1..215 | 1..238 | 581 | 52.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
saturn-PA | 238 | CG32141-PA | 1..238 | 1..238 | 1234 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:45:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25458-PA | 239 | GM25458-PA | 1..238 | 1..237 | 904 | 76.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:45:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14484-PA | 239 | GD14484-PA | 1..238 | 1..237 | 817 | 75.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:45:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ13942-PA | 74 | GJ13942-PA | 1..71 | 1..70 | 162 | 39.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE22007-PA | 236 | GE22007-PA | 1..236 | 1..238 | 630 | 54.4 | Plus |
MIP30042.hyp Sequence
Translation from 76 to 792
> MIP30042.hyp
MWNYRQKVDLETSVKISPYCNSWPSACWFTLKGIDLLKLLVLERSPTYLV
ILTIVLIVLLLLVFKRFKHKWNDVPMSEIESLRKRVKFVTKDMAMLQEAL
NSTVIPKPPLAISDDIRSNINYLDEPESNANDDKLSEFKEIFDPFPPEFD
KISETKALVREENKPEPVIPDAEPREDSVVKNRVRFALTDQGKPAKDETK
HINIAKPTKIIAENNVSVENRNMRKRSSPSNTKTGWKL*
MIP30042.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32141-PA | 238 | CG32141-PA | 1..238 | 1..238 | 1234 | 100 | Plus |