MIP30109.complete Sequence
564 bp assembled on 2011-04-05
GenBank Submission: BT126250.1
> MIP30109.complete
ATTGTTCAAGATGCGATCCCAGCTAACTATCTTCCTTGCCATCGCGGCTT
TCGTTTCGACTGCCTGGGCACTGACTTCTCCCGCCACGGTCACTGTTTCA
TCGGTCACTGTTTCATCGGTCACTATTCCATCGGTCACTATTCCTTCGGT
CACTATTCCGACCACTGATACAGACACGTCCACCACTTCGCCTTCGGCAA
CCGGAAGCAGCACCACCGTGACTCCCACCACCAAGAAACCAAAGAAGAAG
GCTACCGTTGTCCACTACAAGAAGAAGACCCACAAGTCGAACCGACGCCG
CAAGTTCCGCCACTCACGTGATGGAAAGAGGAAGAACCGATCGAGTTGGG
AATAAGAAGGACATCTCGTTTGGAACACCGCAGACCCTGAAGATCTACAT
GAACGACCCACACGCACCTTGTTAATCCTAATGTTACTTTACTCTTATTA
AGTTCGCAATATTTAAATAAAAACATATTTAAAATTTTTTGTTTAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
MIP30109.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:56:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 11125860..11126352 | 1..494 | 2375 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 11122762..11123195 | 450..9 | 1495 | 90.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:56:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11134987..11135482 | 1..496 | 2480 | 100 | Plus |
3L | 28110227 | 3L | 11131887..11132322 | 450..9 | 1445 | 89.6 | Minus |
3L | 28110227 | 3L | 11130866..11130946 | 7..87 | 180 | 81.5 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 11128087..11128582 | 1..496 | 2480 | 100 | Plus |
3L | 28103327 | 3L | 11125075..11125341 | 368..102 | 1260 | 98.1 | Minus |
3L | 28103327 | 3L | 11125284..11125422 | 144..9 | 505 | 92 | Minus |
3L | 28103327 | 3L | 11124987..11125068 | 450..369 | 215 | 84.1 | Minus |
3L | 28103327 | 3L | 11123966..11124046 | 7..87 | 180 | 81.4 | Plus |
3L | 28103327 | 3L | 11124154..11124189 | 183..218 | 165 | 97.2 | Plus |
Blast to na_te.dros performed on 2019-03-16 22:56:09 has no hits.
MIP30109.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:57:16 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 11125860..11126313 | 1..455 | 99 | -> | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-07 17:26:28 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..345 | 11..355 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:01:25 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..345 | 11..355 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:33:34 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..345 | 11..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-07 17:26:27 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..345 | 11..355 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:01:25 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..494 | 1..494 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:34 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14143-RA | 1..494 | 1..494 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:16 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11134987..11135480 | 1..494 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:16 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11134987..11135480 | 1..494 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:16 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11134987..11135480 | 1..494 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:01:25 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11128087..11128580 | 1..494 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:02 Download gff for
MIP30109.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11128087..11128580 | 1..494 | 100 | | Plus |
MIP30109.hyp Sequence
Translation from 0 to 354
> MIP30109.hyp
LFKMRSQLTIFLAIAAFVSTAWALTSPATVTVSSVTVSSVTIPSVTIPSV
TIPTTDTDTSTTSPSATGSSTTVTPTTKKPKKKATVVHYKKKTHKSNRRR
KFRHSRDGKRKNRSSWE*
MIP30109.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14143-PA | 114 | CG14143-PA | 1..114 | 4..117 | 572 | 100 | Plus |
CG32074-PA | 110 | CG32074-PA | 1..110 | 4..117 | 501 | 91.3 | Plus |
nol-PA | 130 | CG32077-PA | 1..123 | 4..113 | 276 | 53.7 | Plus |
CG33267-PB | 94 | CG33267-PB | 18..91 | 30..107 | 137 | 37.2 | Plus |
MIP30109.pep Sequence
Translation from 1 to 354
> MIP30109.pep
LFKMRSQLTIFLAIAAFVSTAWALTSPATVTVSSVTVSSVTIPSVTIPSV
TIPTTDTDTSTTSPSATGSSTTVTPTTKKPKKKATVVHYKKKTHKSNRRR
KFRHSRDGKRKNRSSWE*
MIP30109.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14143-PA | 114 | CG14143-PA | 1..114 | 4..117 | 572 | 100 | Plus |
CG32074-PA | 110 | CG32074-PA | 1..110 | 4..117 | 501 | 91.3 | Plus |
nol-PA | 130 | CG32077-PA | 1..123 | 4..113 | 276 | 53.7 | Plus |
CG33267-PB | 94 | CG33267-PB | 18..91 | 30..107 | 137 | 37.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:41:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14288-PA | 122 | GD14288-PA | 1..119 | 4..114 | 146 | 53.8 | Plus |