Clone MIP30168 Report

Search the DGRC for MIP30168

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:301
Well:68
Vector:pOT2
Associated Gene/TranscriptCG18641-RC
Protein status:MIP30168.pep: gold
Sequenced Size:1793

Clone Sequence Records

MIP30168.complete Sequence

1793 bp assembled on 2011-04-05

GenBank Submission: BT126300.1

> MIP30168.complete
CGCAATCGAATCACACGTGTACTCGAACATCGGGCGGTGAAAGCCAAGAT
CGATTGGTGGCCAATCTCTTTGGAATACCGCGCGTGCCCGCAGTTGTAAA
ACACAAAACTGAATCAATTTCTGCGCAGAGGCAGCCGGAATTATGCCTCG
CCAGCTTTGCCGTCGTCTTGCTGTGCATTGAAATCCAAATCGAGTCCAAT
GACCAGCTCTCGAGCTGGTGCCCAAGCAAGAGTTTCGCACTTTGAGACAG
TTGAGTCGCCGGTCAACGAGCAGGCCTTGACCCAAAGCCCAGAAGAGTTC
AGAGATTCCGCCAAATACAACCCAGTTATATAATAGCACTTGCAACTGCA
ATTGAAATTAAAAGTAGCGTGAATTTGCAAAACATAAAAGGCGAAAAACT
AAAATATGTGGTTACAGTGCGCGAGGAAACCAATACGTGCAGACTTTTGG
CTGCAGCTGCTCTGCGTGAGTTTTACACTCTTTCACCTGGAATTCGCCGC
GGCCCAAAATGCGGGAGTGGTGGCAGCTGCCGTGGCGGCTGGACAAAACC
AAACGCAGGTCTATGTGACGGATTCTTGCCTGCAAAAGCCGTACCGCTGT
CCTCATCCGAAGATCCAGTTCTATTTGTACACGAGACGCACCCAGGAGCA
GCCGGAGTTCATAGATGTCCTGGATCCGAACGCCCTGTACTACACGCACT
TCAATCCACGCCATCCCACCAAGATCATAATCCATGGATTCGGCGGCGGC
AGGACTCTGAGTCCCAGTCCCGATCTGCGGGAGGCCTACTTCAGTGTGGG
CGAGTACAACATCATCATAGTGGACTACGCGGATGCCGTTAAGGAACCTT
GTCTGAGTCAGATGGACTGGGCTCCTCGGTTCGGCAGCCTGTGCATCTCC
CAGCTGGTCAAATACCTCGCCCGACATCCTCGTGGCGTCCAGCCGGACGA
CCTGCACTTCATTGGCTACAGTGTGGGTGCCCACATCGCCGGTCTGGTGG
CTAACTATTTGAAGCCGGAGGAGGGCAAGCTGGGCAGGATCACCGCGCTG
GATCCCACGATATTCTTCTATGCCGGGGCCAACAACTCCAGGGATCTGGA
TTCGACGGATGCACACTTCGTGGATGTTCTGCACACCGGAGCTGGAATCC
TGGGGCAGTGGCATTCCAGTGGTCATGCGGACTTCTATGTCAACGGCGGC
ACGCGGCAACCAGCTTGTGTGGGTTCGGCAACCTTGTTTCAAACGTTGGC
TTGTGATCACACAAAAGTCACGCCGTACTTTATTGAATCCATCACGACAA
CTCGCGGATTTTATGCGGGTCCTTGTCCCAACTTGTTCTCCTATCTAATT
GGTTGGTGTGAGCCCAAGGACTCGGAGTATGTGCTAATGGGCGAACACTG
TTCACACAAAGCTCGAGGGAATTATTATGTGACCACCAATGCCAAGGCGC
CGTTTGCTCGCGGTTTTCCGGGAAAAGGACGATCGAATGGGGAGTACCAG
GGAGTACGGAGATAATGCAATATTGTATAATGATTTTTTCGGAAAAATGC
CTCGATTAATGCATCTTCTACACCGTAGCACTCATGTGATTTTAGCTTGT
TTCCTAATCGATACCTATTTATTTCATATTTTTGTTATTAGTTCTAAATG
CAGCCATTTTTTCGTTGGGACTTGTACAAATAAATAGTTAAGTTTTATGC
CAAAAGTTGATGCTGGAATAAAAAACTCACTTGTTTGGCATAATTTTAAC
ATGTTCGTTTTATTGAATTCCAAATAAAAAAAAAAAAAAAAAA

MIP30168.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2411019..2411760 1240..499 3710 100 Minus
chr2L 23010047 chr2L 2414543..2415042 499..1 2390 99 Minus
chr2L 23010047 chr2L 2410357..2410727 1775..1405 1840 99.7 Minus
chr2L 23010047 chr2L 2410785..2410953 1409..1241 845 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:14:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2411286..2412027 1240..499 3710 100 Minus
2L 23513712 2L 2414809..2415307 499..1 2495 100 Minus
2L 23513712 2L 2410623..2410994 1776..1405 1845 99.7 Minus
2L 23513712 2L 2411052..2411220 1409..1241 845 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2411286..2412027 1240..499 3710 100 Minus
2L 23513712 2L 2414809..2415307 499..1 2495 100 Minus
2L 23513712 2L 2410623..2410994 1776..1405 1845 99.7 Minus
2L 23513712 2L 2411052..2411220 1409..1241 845 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:14:40 has no hits.

MIP30168.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:15:53 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2410357..2410722 1410..1775 100 <- Minus
chr2L 2410785..2410953 1241..1409 100 <- Minus
chr2L 2411019..2411759 500..1240 100 <- Minus
chr2L 2414543..2415042 1..499 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:21 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RB 103..1119 499..1515 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:04:51 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RC 1..1110 406..1515 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:21 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RC 1..1110 406..1515 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:21 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RB 103..1119 499..1515 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:04:51 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RC 16..1790 1..1775 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:21 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
CG18641-RC 16..1790 1..1775 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:53 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2410624..2410989 1410..1775 100 <- Minus
2L 2411052..2411220 1241..1409 100 <- Minus
2L 2411286..2412026 500..1240 100 <- Minus
2L 2414809..2415307 1..499 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:53 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2410624..2410989 1410..1775 100 <- Minus
2L 2411052..2411220 1241..1409 100 <- Minus
2L 2411286..2412026 500..1240 100 <- Minus
2L 2414809..2415307 1..499 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:53 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2410624..2410989 1410..1775 100 <- Minus
2L 2411052..2411220 1241..1409 100 <- Minus
2L 2411286..2412026 500..1240 100 <- Minus
2L 2414809..2415307 1..499 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:04:51 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2410624..2410989 1410..1775 100 <- Minus
arm_2L 2411052..2411220 1241..1409 100 <- Minus
arm_2L 2411286..2412026 500..1240 100 <- Minus
arm_2L 2414809..2415307 1..499 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:08 Download gff for MIP30168.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2410624..2410989 1410..1775 100 <- Minus
2L 2411052..2411220 1241..1409 100 <- Minus
2L 2411286..2412026 500..1240 100 <- Minus
2L 2414809..2415307 1..499 100   Minus

MIP30168.pep Sequence

Translation from 405 to 1514

> MIP30168.pep
MWLQCARKPIRADFWLQLLCVSFTLFHLEFAAAQNAGVVAAAVAAGQNQT
QVYVTDSCLQKPYRCPHPKIQFYLYTRRTQEQPEFIDVLDPNALYYTHFN
PRHPTKIIIHGFGGGRTLSPSPDLREAYFSVGEYNIIIVDYADAVKEPCL
SQMDWAPRFGSLCISQLVKYLARHPRGVQPDDLHFIGYSVGAHIAGLVAN
YLKPEEGKLGRITALDPTIFFYAGANNSRDLDSTDAHFVDVLHTGAGILG
QWHSSGHADFYVNGGTRQPACVGSATLFQTLACDHTKVTPYFIESITTTR
GFYAGPCPNLFSYLIGWCEPKDSEYVLMGEHCSHKARGNYYVTTNAKAPF
ARGFPGKGRSNGEYQGVRR*

MIP30168.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14403-PA 361 GF14403-PA 24..361 32..369 1794 97.6 Plus
Dana\GF14541-PA 465 GF14541-PA 68..350 65..353 500 37.2 Plus
Dana\GF15520-PA 326 GF15520-PA 12..290 64..353 460 38.2 Plus
Dana\GF11422-PA 349 GF11422-PA 2..284 74..352 390 33.2 Plus
Dana\GF22959-PA 341 GF22959-PA 68..337 70..350 354 30.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24523-PA 348 GG24523-PA 11..348 32..369 1813 99.1 Plus
Dere\GG20104-PA 489 GG20104-PA 74..356 65..353 488 36.2 Plus
Dere\GG24521-PA 322 GG24521-PA 12..304 38..353 452 32.9 Plus
Dere\GG24519-PA 353 GG24519-PA 15..280 79..353 429 36.7 Plus
Dere\GG20643-PA 394 GG20643-PA 49..334 70..352 409 33.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11501-PA 305 GH11501-PA 1..305 65..369 1572 93.1 Plus
Dgri\GH13774-PA 475 GH13774-PA 65..349 64..353 508 36.7 Plus
Dgri\GH11499-PA 384 GH11499-PA 8..315 38..353 447 34 Plus
Dgri\GH11187-PA 332 GH11187-PA 1..293 55..353 437 33.1 Plus
Dgri\GH11500-PA 334 GH11500-PA 13..322 38..353 427 32.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG18641-PC 369 CG18641-PC 1..369 1..369 2014 100 Plus
CG14034-PC 338 CG14034-PC 33..311 65..353 512 39.8 Plus
CG14034-PB 338 CG14034-PB 33..311 65..353 512 39.8 Plus
CG13282-PB 484 CG13282-PB 72..354 65..353 496 36.5 Plus
CG13282-PA 484 CG13282-PA 72..354 65..353 496 36.5 Plus
CG34447-PA 389 CG34447-PA 37..316 65..353 470 36.7 Plus
CG34447-PB 389 CG34447-PB 37..316 65..353 470 36.7 Plus
CG34448-PA 344 CG34448-PA 13..323 39..353 454 33.6 Plus
CG6472-PB 389 CG6472-PB 44..329 70..352 408 33.8 Plus
CG6277-PA 341 CG6277-PA 68..337 70..350 335 30.6 Plus
CG6271-PA 341 CG6271-PA 68..337 70..350 335 29.5 Plus
CG17192-PA 337 CG17192-PA 62..335 69..352 330 28.9 Plus
CG6295-PA 338 CG6295-PA 64..337 70..353 326 29.6 Plus
CG6296-PA 676 CG6296-PA 33..344 30..353 322 28.4 Plus
CG7367-PD 358 CG7367-PD 104..351 99..353 317 33.3 Plus
CG7367-PB 358 CG7367-PB 104..351 99..353 317 33.3 Plus
sxe2-PB 387 CG4979-PB 71..360 70..350 317 28 Plus
sxe2-PA 387 CG4979-PA 71..360 70..350 317 28 Plus
CG7367-PC 389 CG7367-PC 135..382 99..353 317 33.3 Plus
CG5966-PA 540 CG5966-PA 62..396 54..352 310 28.6 Plus
CG6283-PA 339 CG6283-PA 65..337 70..352 306 28.6 Plus
CG10357-PC 321 CG10357-PC 56..316 106..353 301 30.7 Plus
CG6431-PB 346 CG6431-PB 51..288 65..309 300 32.5 Plus
CG4582-PA 432 CG4582-PA 144..413 84..350 298 30.4 Plus
CG6431-PC 351 CG6431-PC 56..293 65..309 296 32.1 Plus
CG6675-PC 386 CG6675-PC 106..384 62..353 291 31.3 Plus
CG6675-PB 390 CG6675-PB 110..388 62..353 291 31.3 Plus
CG17191-PA 337 CG17191-PA 63..335 70..352 285 26.9 Plus
CG6847-PB 1000 CG6847-PB 193..463 106..350 271 30.4 Plus
CG6847-PA 1000 CG6847-PA 193..463 106..350 271 30.4 Plus
CG10116-PA 289 CG10116-PA 24..282 72..353 263 30.3 Plus
CG17292-PD 340 CG17292-PD 26..314 71..356 258 29.3 Plus
CG17292-PC 340 CG17292-PC 26..314 71..356 258 29.3 Plus
CG17292-PB 340 CG17292-PB 26..314 71..356 258 29.3 Plus
CG17292-PA 340 CG17292-PA 26..314 71..356 258 29.3 Plus
CG4267-PB 374 CG4267-PB 64..354 62..353 255 27 Plus
CG4267-PA 374 CG4267-PA 64..354 62..353 255 27 Plus
CG5966-PB 436 CG5966-PB 4..292 100..352 252 28.3 Plus
CG18258-PA 468 CG18258-PA 199..449 97..352 239 29.5 Plus
CG5162-PB 411 CG5162-PB 132..369 106..350 217 31.1 Plus
CG5162-PA 411 CG5162-PA 132..369 106..350 217 31.1 Plus
CG1986-PB 404 CG1986-PB 125..345 134..350 210 29.7 Plus
CG1986-PA 404 CG1986-PA 125..345 134..350 210 29.7 Plus
Yp1-PB 439 CG2985-PB 247..427 181..369 206 33 Plus
Yp1-PA 439 CG2985-PA 247..427 181..369 206 33 Plus
Yp3-PB 420 CG11129-PB 232..405 176..355 196 32.4 Plus
Yp3-PA 420 CG11129-PA 232..405 176..355 196 32.4 Plus
Yp2-PB 442 CG2979-PB 227..425 158..365 159 29.9 Plus
Yp2-PA 442 CG2979-PA 227..425 158..365 159 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16996-PA 648 GI16996-PA 310..648 31..369 1718 94.4 Plus
Dmoj\GI17178-PA 468 GI17178-PA 60..343 65..353 495 36.2 Plus
Dmoj\GI16995-PA 380 GI16995-PA 38..327 65..364 452 34.6 Plus
Dmoj\GI17858-PA 371 GI17858-PA 9..342 1..353 405 29.2 Plus
Dmoj\GI16996-PA 648 GI16996-PA 32..291 47..319 387 34.9 Plus
Dmoj\GI21161-PA 396 GI21161-PA 44..329 70..352 379 34.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26469-PA 348 GL26469-PA 12..348 33..369 1777 97 Plus
Dper\GL19328-PA 392 GL19328-PA 10..267 87..353 466 38.1 Plus
Dper\GL26468-PA 383 GL26468-PA 9..315 39..353 455 33.4 Plus
Dper\GL23624-PA 341 GL23624-PA 68..337 70..350 343 30.8 Plus
Dper\GL26109-PA 380 GL26109-PA 99..378 61..353 339 33.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15027-PA 348 GA15027-PA 12..348 33..369 1777 97 Plus
Dpse\GA12169-PA 474 GA12169-PA 67..349 65..353 501 37.2 Plus
Dpse\GA28874-PA 383 GA28874-PA 9..315 39..353 450 33.4 Plus
Dpse\GA28876-PA 340 GA28876-PA 21..326 44..353 441 34.5 Plus
Dpse\GA19482-PA 341 GA19482-PA 68..337 70..350 347 31.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18230-PA 348 GM18230-PA 11..348 32..369 1817 99.4 Plus
Dsec\GM18032-PA 324 GM18032-PA 19..297 65..353 515 40.1 Plus
Dsec\GM18227-PA 389 GM18227-PA 36..316 64..353 473 36.2 Plus
Dsec\GM18228-PA 344 GM18228-PA 13..323 39..353 438 33 Plus
Dsec\GM12078-PA 165 GM12078-PA 70..153 50..133 413 90.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22660-PA 316 GD22660-PA 11..289 65..353 517 40.1 Plus
Dsim\GD21893-PA 484 GD21893-PA 72..354 65..353 495 36.5 Plus
Dsim\GD17823-PA 389 GD17823-PA 36..316 64..353 471 35.9 Plus
Dsim\GD11231-PA 394 GD11231-PA 49..334 70..352 414 33.8 Plus
Dsim\GD22835-PA 309 GD22835-PA 13..288 39..319 406 33.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24215-PA 350 GJ24215-PA 13..350 32..369 1710 93.8 Plus
Dvir\GJ22109-PA 446 GJ22109-PA 39..322 65..353 498 36.5 Plus
Dvir\GJ17356-PA 345 GJ17356-PA 32..313 65..353 444 33.9 Plus
Dvir\GJ24193-PA 384 GJ24193-PA 41..323 64..355 443 35.5 Plus
Dvir\GJ24204-PA 336 GJ24204-PA 20..324 44..353 433 34.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:45:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23738-PA 339 GK23738-PA 20..339 50..369 1670 95 Plus
Dwil\GK18152-PA 428 GK18152-PA 20..303 64..353 493 36.1 Plus
Dwil\GK23736-PA 521 GK23736-PA 152..461 25..353 468 33.4 Plus
Dwil\GK23737-PA 319 GK23737-PA 23..308 44..353 432 33.7 Plus
Dwil\GK22029-PA 364 GK22029-PA 27..315 70..352 409 33.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15114-PA 348 GE15114-PA 11..348 32..369 1817 99.4 Plus
Dyak\GE19008-PA 393 GE19008-PA 88..366 65..353 499 37.7 Plus
Dyak\GE13160-PA 483 GE13160-PA 72..354 65..353 490 36.2 Plus
Dyak\GE15105-PA 370 GE15105-PA 16..315 44..353 464 36.1 Plus
Dyak\GE15108-PA 609 GE15108-PA 11..280 75..353 425 35.8 Plus
Dyak\GE15108-PA 609 GE15108-PA 332..588 74..353 375 33.6 Plus

MIP30168.hyp Sequence

Translation from 405 to 1514

> MIP30168.hyp
MWLQCARKPIRADFWLQLLCVSFTLFHLEFAAAQNAGVVAAAVAAGQNQT
QVYVTDSCLQKPYRCPHPKIQFYLYTRRTQEQPEFIDVLDPNALYYTHFN
PRHPTKIIIHGFGGGRTLSPSPDLREAYFSVGEYNIIIVDYADAVKEPCL
SQMDWAPRFGSLCISQLVKYLARHPRGVQPDDLHFIGYSVGAHIAGLVAN
YLKPEEGKLGRITALDPTIFFYAGANNSRDLDSTDAHFVDVLHTGAGILG
QWHSSGHADFYVNGGTRQPACVGSATLFQTLACDHTKVTPYFIESITTTR
GFYAGPCPNLFSYLIGWCEPKDSEYVLMGEHCSHKARGNYYVTTNAKAPF
ARGFPGKGRSNGEYQGVRR*

MIP30168.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG18641-PC 369 CG18641-PC 1..369 1..369 2014 100 Plus
CG14034-PC 338 CG14034-PC 33..311 65..353 512 39.8 Plus
CG14034-PB 338 CG14034-PB 33..311 65..353 512 39.8 Plus
CG13282-PB 484 CG13282-PB 72..354 65..353 496 36.5 Plus
CG13282-PA 484 CG13282-PA 72..354 65..353 496 36.5 Plus