Clone Sequence Records
MIP30205.complete Sequence
488 bp assembled on 2011-03-30
GenBank Submission: BT126238.1
> MIP30205.complete
CGGCACAGCTCAAGATGTGTTCCAAACTAACTCTTTTCCTGGGGTTAGTG
GCCCTCATTGCTGCTGTCTTTGCTCTTGATGATCCCACATCGCCGACATC
CCCAACATCTCCAACATCTCCAACTTCGCCGACTTCTCCAACTTCGCCGA
CTTCTCCAACTTCTCCCACTTCTCCTACATCACCAACTTCACCAACAACG
CCAGATGCCTCTACTGCCACCACTGCCGCCCCCTCTACGGCATCCACTAC
CACAGAAAGGACTCGCAGACGCAGGCGCAGGCGCAGGATAATCCGGATCC
GCAGGTTCAGGGGCGGCAACCGCCGTCGTGGATTCGGTAGACGCAGATTC
GGTGGTCGCCGGTTCGGTGAGGGAGGTGTCCGTGAAGTCGTGATCCGTGA
GCGCGGATTGGAGCGCCTCCTTTAAGATCTATAACGAAAACATTATTAAA
ATAAATCAAAATATCAATTTAAAAAAAAAAAAAAAAAA
MIP30205.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:54:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 18516578..18517047 | 1..470 | 2350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:54:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18526976..18527446 | 1..471 | 2355 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 18520076..18520546 | 1..471 | 2355 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 22:54:53 has no hits.
MIP30205.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:55:45 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 18516775..18517047 | 198..470 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-04 11:17:28 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..411 | 15..425 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:00:43 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..411 | 15..425 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:33:00 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..411 | 15..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-04 11:17:28 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..411 | 15..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:00:43 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..470 | 1..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:00 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32198-RB | 1..470 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:45 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18526976..18527445 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:45 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18526976..18527445 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:55:45 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18526976..18527445 | 1..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:00:43 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18520076..18520545 | 1..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:04:08 Download gff for
MIP30205.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18520076..18520545 | 1..470 | 100 | | Plus |
MIP30205.hyp Sequence
Translation from 2 to 424
> MIP30205.hyp
AQLKMCSKLTLFLGLVALIAAVFALDDPTSPTSPTSPTSPTSPTSPTSPT
SPTSPTSPTSPTSPTTPDASTATTAAPSTASTTTERTRRRRRRRRIIRIR
RFRGGNRRRGFGRRRFGGRRFGEGGVREVVIRERGLERLL*
MIP30205.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32198-PB | 136 | CG32198-PB | 1..136 | 5..140 | 691 | 100 | Plus |
CG12522-PA | 137 | CG12522-PA | 5..132 | 9..138 | 198 | 45.2 | Plus |
CG15741-PA | 135 | CG15741-PA | 6..107 | 16..109 | 187 | 42.2 | Plus |
CG32071-PA | 150 | CG32071-PA | 15..149 | 9..138 | 184 | 44.4 | Plus |
CG15741-PA | 135 | CG15741-PA | 7..106 | 11..109 | 173 | 43 | Plus |
nol-PA | 130 | CG32077-PA | 1..120 | 5..120 | 172 | 33.1 | Plus |
MIP30205.pep Sequence
Translation from 2 to 424
> MIP30205.pep
AQLKMCSKLTLFLGLVALIAAVFALDDPTSPTSPTSPTSPTSPTSPTSPT
SPTSPTSPTSPTSPTTPDASTATTAAPSTASTTTERTRRRRRRRRIIRIR
RFRGGNRRRGFGRRRFGGRRFGEGGVREVVIRERGLERLL*
MIP30205.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32198-PB | 136 | CG32198-PB | 1..136 | 5..140 | 691 | 100 | Plus |
CG12522-PA | 137 | CG12522-PA | 5..132 | 9..138 | 198 | 45.2 | Plus |
CG15741-PA | 135 | CG15741-PA | 6..107 | 16..109 | 187 | 42.2 | Plus |
CG32071-PA | 150 | CG32071-PA | 15..149 | 9..138 | 184 | 44.4 | Plus |
CG15741-PA | 135 | CG15741-PA | 7..106 | 11..109 | 173 | 43 | Plus |
nol-PA | 130 | CG32077-PA | 1..120 | 5..120 | 172 | 33.1 | Plus |
CG12491-PA | 157 | CG12491-PA | 1..144 | 5..120 | 160 | 36.1 | Plus |
CG34105-PA | 157 | CG34105-PA | 1..144 | 5..120 | 160 | 36.1 | Plus |
CG12546-PA | 117 | CG12546-PA | 22..102 | 35..115 | 144 | 42 | Plus |
CG14452-PA | 117 | CG14452-PA | 22..102 | 35..115 | 144 | 42 | Plus |
CG14454-PB | 120 | CG14454-PB | 4..102 | 11..115 | 142 | 38.1 | Plus |
CG14454-PA | 120 | CG14454-PA | 4..102 | 11..115 | 142 | 38.1 | Plus |
CG32453-PB | 120 | CG32453-PB | 4..102 | 11..115 | 142 | 38.1 | Plus |
CG32453-PA | 120 | CG32453-PA | 4..102 | 11..115 | 142 | 38.1 | Plus |
CG11300-PA | 157 | CG11300-PA | 1..156 | 5..136 | 136 | 31.9 | Plus |
CG14265-PB | 119 | CG14265-PB | 2..119 | 8..124 | 135 | 33.9 | Plus |