Clone MIP30261 Report

Search the DGRC for MIP30261

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:302
Well:61
Vector:pOT2
Protein status:MIP30261.pep: Imported from assembly
Sequenced Size:659

Clone Sequence Records

MIP30261.complete Sequence

659 bp assembled on 2011-04-04

GenBank Submission: BT126254.1

> MIP30261.complete
ATTAAGGAAATATACTTCCAACTCGTCATTGTTTCGCTGGCTGTACTGTT
ACCAGCGAATAGTTATCCCCTGGAGCCAAATGCGGAAAATGCATGCGAAT
TTATCAGGAACGTTGCGCGATTTCCAGACGATGAGAATGCTTGGTGGGAA
AAGAGTAAAAGTTTAGCCAATTCCATTTTGGAGACCAAAATCAATTATAA
AGGATCATACCGTTCCTGTAACCAATATGTTGCTACCCTACAAAATCTAA
AAAATCGTGGAAATGAATTAAATGCATCCAGTCCTTGGGCACAAATAATT
GAATATCTTAACGCATCCTCACAGGAATATGAAGGTGGTCCGTGTACTGA
TGAGGAACCCTACAGTTATATATATTCAAGTAACATTAAAAACATGAAAA
ACGATATACGCGAATTGAGTCAACATGTGAAAGATCAAATCGAATATCAT
AATTTGGTGGCACATATTGATACGAATGTCAATACGATCATAAATACATT
ATCTGGTTTCTCTATTCCGATATTGAAGTATTTAACACGGTTTCCTTCGG
CAAAGTGTACTCTGCCCAATTGACGAAAAACCCATTTTATAATGCTGTCT
AAAATAAATCCAAGAGAATAAATTGACATGTAATTTTGAAAAAAAAAAAA
AAAAAAAAA

MIP30261.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:04:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8143420..8144010 638..48 2955 100 Minus
chr2L 23010047 chr2L 8144063..8144114 52..1 245 98.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144390..8144981 639..48 2960 100 Minus
2L 23513712 2L 8145034..8145085 52..1 245 98.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144390..8144981 639..48 2960 100 Minus
2L 23513712 2L 8145034..8145085 52..1 245 98 Minus
Blast to na_te.dros performed on 2019-03-16 23:04:32 has no hits.

MIP30261.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:05:10 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8143420..8144009 49..638 100 <- Minus
chr2L 8144067..8144114 1..48 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:14:59 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 4..576 1..573 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:03:28 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 4..576 1..573 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:35:19 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 4..576 1..573 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:14:59 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 4..576 1..573 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:03:28 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 23..660 1..638 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:35:19 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 23..660 1..638 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:05:10 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144391..8144980 49..638 100 <- Minus
2L 8145038..8145085 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:05:10 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144391..8144980 49..638 100 <- Minus
2L 8145038..8145085 1..48 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:05:10 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144391..8144980 49..638 100 <- Minus
2L 8145038..8145085 1..48 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:03:28 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8144391..8144980 49..638 100 <- Minus
arm_2L 8145038..8145085 1..48 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:04:28 Download gff for MIP30261.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144391..8144980 49..638 100 <- Minus
2L 8145038..8145085 1..48 100   Minus

MIP30261.pep Sequence

Translation from 0 to 572

> MIP30261.pep
IKEIYFQLVIVSLAVLLPANSYPLEPNAENACEFIRNVARFPDDENAWWE
KSKSLANSILETKINYKGSYRSCNQYVATLQNLKNRGNELNASSPWAQII
EYLNASSQEYEGGPCTDEEPYSYIYSSNIKNMKNDIRELSQHVKDQIEYH
NLVAHIDTNVNTIINTLSGFSIPILKYLTRFPSAKCTLPN*

MIP30261.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-PA 191 CG42763-PA 2..191 1..190 1001 100 Plus

MIP30261.hyp Sequence

Translation from 0 to 572

> MIP30261.hyp
IKEIYFQLVIVSLAVLLPANSYPLEPNAENACEFIRNVARFPDDENAWWE
KSKSLANSILETKINYKGSYRSCNQYVATLQNLKNRGNELNASSPWAQII
EYLNASSQEYEGGPCTDEEPYSYIYSSNIKNMKNDIRELSQHVKDQIEYH
NLVAHIDTNVNTIINTLSGFSIPILKYLTRFPSAKCTLPN*

MIP30261.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-PA 191 CG42763-PA 2..191 1..190 1001 100 Plus