Clone MIP30263 Report

Search the DGRC for MIP30263

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:302
Well:63
Vector:pOT2
Associated Gene/TranscriptCG17147-RB
Protein status:MIP30263.pep: gold
Sequenced Size:1158

Clone Sequence Records

MIP30263.complete Sequence

1158 bp assembled on 2011-04-08

GenBank Submission: BT126302.1

> MIP30263.complete
CCACATCAAACCACTCGATCTATTCTGTTGCAAATTAAACCAAAGTTTCC
CAGCAATCAGCCATGCTAAACCTCAAACTTGGAGTGCTTCTCGGATGCGT
TCTCTTGTTGGCTACCGTAGCTCTTTCGGCGAGTGTCGGTGAATACGAGG
AGCTGTGTCGCCTTTTCAAGAACGGGACCAAGGTTCGCAAGCCCGGCACC
TGCGACCAGTACATTCAGTGCTACGATGGCAACGGCACCGTCCTGACCTG
CCCCTCCAACCAGTCCTTCAATCCCAGCAAGGGTAGTTGCGTGGACACGT
TGGCCAACAGCAACAAGTACTGCGGCAATCGCTGCGAGGGATTGGATGGC
GAATGGGTGGCCGATCCGACCGAGTGCCACAAGTACTTCTACTGCATGAA
CGGCGTACCGCTGGCGGGGATGTGTCCCGTAGGCCAGCACTTCGATGAGC
GCTCTCAGTCCTGCCTGTACGGCGTGGACTCCATGTGCGTGGATGTGAAC
AACATTTGCGAGCTGGTGGCGGAAAATACGAAGTTCCGGAATGAGAAGGA
CTGCGCCTACTACTATGAGTGTGACAAGACCGGTAACCATGCGTCCAAGA
GCTGCACTGTCACCTCCAAGAAGCGCGAGTATTTCGATGTGGAGAGCGGC
AATTGCGTGGAAGCCAATAAGGTGGAGTGCACCGCCCATTCGAAGGAGAA
CGTCTGCACCAGCAGCACAACAATGACATTCAAATCCGACCAAGCCACCT
GCCGTGGATACTTCGTATGCAAGGCCCTCTATCCCGTCGCCGACCTGGAT
CCACTGTGGACGCAGTGCCCCGAGGGCTACTTCTTCGACGAGGATCGGCA
GCTCTGCGCCAATCCCACCACAGTGGTGTGCACCCACAACAGATGCGACG
GACGCGGCACGATGCTGGTGACCAGCAGCAGCAATAACTGTCACAACTAC
ATCCGGTGTGTGGACAACAAGGAGGTGACGGAGGAAACCTGCCACTGGGA
TCACTTCTTCGACGAGACAGTGGAAGCGTGCTCCTCCAAGATCATCTACG
ATAAGTGTTGCGATGGCCGGGACTAAACAAAAAATAAATTTAACTAAAAG
TGCAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

MIP30263.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20213458..20214495 70..1107 5175 99.9 Plus
chr3L 24539361 chr3L 20213132..20213200 1..69 345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20224287..20225329 70..1112 5215 100 Plus
3L 28110227 3L 20223961..20224029 1..69 345 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20217387..20218429 70..1112 5215 100 Plus
3L 28103327 3L 20217061..20217129 1..69 345 100 Plus
Blast to na_te.dros performed 2019-03-16 23:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy2 6841 gypsy2 GYPSY2 6841bp 431..464 1072..1106 127 88.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1507..1588 865..954 117 63.3 Plus

MIP30263.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:15:58 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20213132..20213200 1..69 100 -> Plus
chr3L 20213458..20214495 70..1107 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:24 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RA 1..1017 63..1076 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:05:01 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 1..1014 63..1076 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:33 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 1..1014 63..1076 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:23 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RA 1..1017 63..1076 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:05:01 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 30..1136 1..1107 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:33 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 30..1136 1..1107 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:58 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20223961..20224029 1..69 100 -> Plus
3L 20224287..20225324 70..1107 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:58 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20223961..20224029 1..69 100 -> Plus
3L 20224287..20225324 70..1107 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:58 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20223961..20224029 1..69 100 -> Plus
3L 20224287..20225324 70..1107 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:05:01 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20217061..20217129 1..69 100 -> Plus
arm_3L 20217387..20218424 70..1107 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:30 Download gff for MIP30263.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20217387..20218424 70..1107 100   Plus
3L 20217061..20217129 1..69 100 -> Plus

MIP30263.pep Sequence

Translation from 62 to 1075

> MIP30263.pep
MLNLKLGVLLGCVLLLATVALSASVGEYEELCRLFKNGTKVRKPGTCDQY
IQCYDGNGTVLTCPSNQSFNPSKGSCVDTLANSNKYCGNRCEGLDGEWVA
DPTECHKYFYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNICE
LVAENTKFRNEKDCAYYYECDKTGNHASKSCTVTSKKREYFDVESGNCVE
ANKVECTAHSKENVCTSSTTMTFKSDQATCRGYFVCKALYPVADLDPLWT
QCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRCV
DNKEVTEETCHWDHFFDETVEACSSKIIYDKCCDGRD*

MIP30263.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:45:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25314-PA 336 GF25314-PA 2..336 1..337 1276 69.7 Plus
Dana\GF24498-PA 340 GF24498-PA 1..332 1..327 455 32.2 Plus
Dana\GF25313-PA 317 GF25313-PA 30..310 29..327 329 32.2 Plus
Dana\GF24479-PA 366 GF24479-PA 13..347 14..324 294 28.2 Plus
Dana\GF25312-PA 347 GF25312-PA 4..331 5..333 293 27.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16088-PA 336 GG16088-PA 1..335 1..336 1463 83.6 Plus
Dere\GG13869-PA 322 GG13869-PA 11..320 25..332 439 34.5 Plus
Dere\GG16087-PA 333 GG16087-PA 27..326 29..327 429 35.2 Plus
Dere\GG16084-PA 352 GG16084-PA 1..326 2..328 292 28 Plus
Dere\GG13334-PA 359 GG13334-PA 1..348 2..324 258 26.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16338-PA 304 GH16338-PA 1..304 31..337 908 57.9 Plus
Dgri\GH14443-PA 346 GH14443-PA 15..345 13..333 473 35 Plus
Dgri\GH11417-PA 302 GH11417-PA 1..297 34..328 398 33.9 Plus
Dgri\GH15115-PA 336 GH15115-PA 11..325 30..324 267 26.2 Plus
Dgri\GH15114-PA 309 GH15114-PA 2..293 29..323 226 26.2 Plus
Dgri\GH15114-PA 309 GH15114-PA 122..294 31..199 167 32.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-PB 337 CG17147-PB 1..337 1..337 1894 100 Plus
CG17145-PB 334 CG17145-PB 3..332 5..332 556 35.9 Plus
CG17145-PA 334 CG17145-PA 3..332 5..332 556 35.9 Plus
CG5883-PA 339 CG5883-PA 1..337 1..332 510 34 Plus
CG6996-PC 364 CG6996-PC 28..331 31..333 340 28.9 Plus
CG6996-PB 364 CG6996-PB 28..331 31..333 340 28.9 Plus
CG7017-PB 359 CG7017-PB 1..357 2..333 311 26.6 Plus
CG7017-PA 359 CG7017-PA 1..357 2..333 311 26.6 Plus
CG7298-PA 369 CG7298-PA 5..336 14..325 308 27.4 Plus
CG7290-PB 419 CG7290-PB 5..330 5..323 304 25.4 Plus
CG7290-PA 419 CG7290-PA 5..330 5..323 304 25.4 Plus
CG5897-PC 343 CG5897-PC 11..339 12..333 298 24.9 Plus
CG6933-PE 351 CG6933-PE 4..339 2..327 256 24.4 Plus
CG6933-PB 351 CG6933-PB 4..339 2..327 256 24.4 Plus
CG6933-PA 351 CG6933-PA 4..339 2..327 256 24.4 Plus
CG6933-PD 363 CG6933-PD 16..351 2..327 256 24.4 Plus
CG6933-PC 363 CG6933-PC 16..351 2..327 256 24.4 Plus
CG31077-PB 988 CG31077-PB 178..472 25..323 244 24.5 Plus
CG17826-PA 751 CG17826-PA 84..336 37..323 237 26.5 Plus
CG31077-PB 988 CG31077-PB 48..301 47..323 232 26.5 Plus
CG43896-PB 1324 CG43896-PB 149..461 28..323 232 26.2 Plus
CG43896-PD 2113 CG43896-PD 149..461 28..323 232 26.2 Plus
CG43896-PC 2113 CG43896-PC 149..461 28..323 232 26.2 Plus
CG43896-PB 1324 CG43896-PB 5..334 9..323 206 22.4 Plus
CG43896-PD 2113 CG43896-PD 5..334 9..323 206 22.4 Plus
CG43896-PC 2113 CG43896-PC 5..334 9..323 206 22.4 Plus
CG43896-PB 1324 CG43896-PB 543..819 31..333 205 24.3 Plus
CG43896-PD 2113 CG43896-PD 543..819 31..333 205 24.3 Plus
CG43896-PC 2113 CG43896-PC 543..819 31..333 205 24.3 Plus
CG17826-PA 751 CG17826-PA 280..548 19..323 201 25.7 Plus
CG31077-PB 988 CG31077-PB 59..369 18..336 200 24 Plus
CG17826-PA 751 CG17826-PA 388..664 21..323 200 25.9 Plus
CG17826-PA 751 CG17826-PA 176..442 21..323 196 25.6 Plus
CG43896-PD 2113 CG43896-PD 1632..1950 37..337 193 26.3 Plus
CG43896-PC 2113 CG43896-PC 1632..1950 37..337 193 26.3 Plus
CG17826-PA 751 CG17826-PA 41..285 47..323 187 23.6 Plus
CG31077-PB 988 CG31077-PB 644..970 34..323 180 20.9 Plus
CG43896-PB 1324 CG43896-PB 290..575 32..310 177 24.3 Plus
CG43896-PD 2113 CG43896-PD 290..575 32..310 177 24.3 Plus
CG43896-PC 2113 CG43896-PC 290..575 32..310 177 24.3 Plus
obst-J-PA 353 CG7348-PA 97..273 42..212 175 26.1 Plus
CG31077-PB 988 CG31077-PB 38..246 95..324 172 24.5 Plus
obst-J-PA 353 CG7348-PA 6..260 8..266 170 22.1 Plus
CG7252-PA 474 CG7252-PA 179..467 36..326 170 24.9 Plus
Muc68D-PB 1514 CG6004-PB 1314..1514 32..207 170 26.2 Plus
obst-J-PA 353 CG7348-PA 45..260 105..324 161 26.5 Plus
CG43896-PB 1324 CG43896-PB 42..215 163..337 159 25.1 Plus
CG43896-PD 2113 CG43896-PD 42..215 163..337 159 25.1 Plus
CG43896-PC 2113 CG43896-PC 42..215 163..337 159 25.1 Plus
CG43896-PD 2113 CG43896-PD 1147..1417 46..323 158 23.9 Plus
CG43896-PC 2113 CG43896-PC 1147..1417 46..323 158 23.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11529-PA 334 GI11529-PA 5..334 2..337 991 55.9 Plus
Dmoj\GI14568-PA 335 GI14568-PA 4..335 6..332 445 34.1 Plus
Dmoj\GI13577-PA 353 GI13577-PA 32..344 29..337 400 31.8 Plus
Dmoj\GI13766-PA 360 GI13766-PA 34..349 30..324 254 27.5 Plus
Dmoj\GI11528-PA 316 GI11528-PA 1..290 41..328 252 28.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25120-PA 338 GL25120-PA 8..332 7..334 1106 63 Plus
Dper\GL25119-PA 336 GL25119-PA 7..331 3..328 505 36.4 Plus
Dper\GL25071-PA 337 GL25071-PA 30..329 29..327 383 31.4 Plus
Dper\GL25118-PA 371 GL25118-PA 1..324 2..328 287 25.8 Plus
Dper\GL25052-PA 381 GL25052-PA 10..330 1..325 269 29.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23689-PA 338 GA23689-PA 9..332 8..334 1103 62.9 Plus
Dpse\GA14346-PA 336 GA14346-PA 7..331 3..328 509 36.4 Plus
Dpse\GA19200-PA 337 GA19200-PA 30..329 29..327 384 31.4 Plus
Dpse\GA20015-PA 369 GA20015-PA 1..324 2..328 291 26.1 Plus
Dpse\GA23596-PA 381 GA23596-PA 10..330 1..325 261 29.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22261-PA 338 GM22261-PA 1..338 1..337 1686 93.5 Plus
Dsec\GM24691-PA 340 GM24691-PA 1..338 1..332 456 33.7 Plus
Dsec\GM22260-PA 341 GM22260-PA 23..333 18..327 450 35.2 Plus
Dsec\GM22259-PA 360 GM22259-PA 11..326 14..328 281 27.3 Plus
Dsec\GM24694-PA 415 GM24694-PA 79..411 7..333 264 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14860-PA 338 GD14860-PA 1..338 1..337 1697 93.8 Plus
Dsim\GD14859-PA 334 GD14859-PA 3..326 5..327 474 35.3 Plus
Dsim\GD12761-PA 340 GD12761-PA 1..338 1..332 452 32.9 Plus
Dsim\GD14858-PA 358 GD14858-PA 11..326 14..328 286 26.5 Plus
Dsim\GD12764-PA 415 GD12764-PA 79..411 7..333 267 26.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11548-PA 334 GJ11548-PA 5..334 2..337 1047 58.3 Plus
Dvir\GJ17080-PA 329 GJ17080-PA 25..324 29..328 439 34.4 Plus
Dvir\GJ13911-PA 355 GJ13911-PA 34..346 29..337 404 33 Plus
Dvir\GJ13756-PA 477 GJ13756-PA 124..466 13..324 280 27.3 Plus
Dvir\GJ11547-PA 349 GJ11547-PA 24..331 23..328 268 26.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16942-PA 338 GK16942-PA 7..338 6..337 1060 61.6 Plus
Dwil\GK13618-PA 345 GK13618-PA 12..334 13..327 486 37.5 Plus
Dwil\GK16941-PA 323 GK16941-PA 7..323 18..332 484 36.4 Plus
Dwil\GK16940-PA 338 GK16940-PA 1..297 41..334 260 26.8 Plus
Dwil\GK17243-PA 721 GK17243-PA 359..711 1..325 234 25.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19650-PA 336 GE19650-PA 1..336 1..337 1483 85.5 Plus
Dyak\GE23067-PA 117 GE23067-PA 1..117 221..337 553 86.3 Plus
Dyak\GE19649-PA 334 GE19649-PA 6..326 8..327 433 35.1 Plus
Dyak\GE20161-PA 323 GE20161-PA 15..321 29..332 402 33.9 Plus
Dyak\GE19648-PA 358 GE19648-PA 11..326 14..328 289 27.4 Plus

MIP30263.hyp Sequence

Translation from 62 to 1075

> MIP30263.hyp
MLNLKLGVLLGCVLLLATVALSASVGEYEELCRLFKNGTKVRKPGTCDQY
IQCYDGNGTVLTCPSNQSFNPSKGSCVDTLANSNKYCGNRCEGLDGEWVA
DPTECHKYFYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNICE
LVAENTKFRNEKDCAYYYECDKTGNHASKSCTVTSKKREYFDVESGNCVE
ANKVECTAHSKENVCTSSTTMTFKSDQATCRGYFVCKALYPVADLDPLWT
QCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRCV
DNKEVTEETCHWDHFFDETVEACSSKIIYDKCCDGRD*

MIP30263.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-PB 337 CG17147-PB 1..337 1..337 1894 100 Plus
CG17145-PB 334 CG17145-PB 3..332 5..332 556 35.9 Plus
CG17145-PA 334 CG17145-PA 3..332 5..332 556 35.9 Plus
CG5883-PA 339 CG5883-PA 1..337 1..332 510 34 Plus
CG6996-PC 364 CG6996-PC 28..331 31..333 340 28.9 Plus