Clone MIP30282 Report

Search the DGRC for MIP30282

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:302
Well:82
Vector:pOT2
Associated Gene/TranscriptCG15153-RA
Protein status:MIP30282.pep: gold
Sequenced Size:1336

Clone Sequence Records

MIP30282.complete Sequence

1336 bp assembled on 2011-04-04

GenBank Submission: BT126255.1

> MIP30282.complete
CAACGAATTGGACCCGAAATGGATTTCCACCTGCTGATGATTGCACTCGT
GCTTGCACCAGTCTTTACACCTGTCCACTGCCAGGTGGCCTGCAATGCGA
GGAGCGGCCCTGTCCGCCAGAAACGCATCGTTCTCAGCAGCCCGGGAACA
GGTGGGCTGGCCGAGTTGGACACTTGCCAGTACCGCGTGGCGCCGTGGAG
CGGCCAGGTGTGTCAGGTGCGCGTTGATTTCGAGCGTTTGGAGCTGCCGC
AGCCGCAGTTGAATGCCAATTCCGGAGTGCTGGAGTGCGTCGATTTTCTG
CAGATACAGCATTTCCGGCTGTGCGGTCGCAACAGTGGTCAGCACTTGTA
TATACCCATTCGCCGGGGTCAGGAGCTGCAGCTTCTGTTTCGACTGGCCA
CGTCCCTCGGCAGGCAGTCCACCTGGCAGCTGACTCTCACCCAACTAGAG
TGTCCCAGGGACTCCGCCAGGGGTGTAGGTACAAGGCAACCCGAGGTGCA
AACACCCACTGTGCGACCGATTTTGCCCTTTTTGGGTAACTTCCTGCCGC
GGACCATCTTTGGCGGACAATCTGGAATCGGCTCGGGTTCCGGTCCCGCT
GCCCAGCTTATCCAGACTTTCACATCGCCTTCAAGTGCGGATCTGGAGAT
GTTGGCACCTCTGGGCTGTGATCAGTACTACAGGACCACCACTGGCGGAA
TAGTGAGCTTCAATTTTGCAGGTGGCGTCTATATGCCCAACATGAAGTAC
TCGATTTGTGTCAAGGGAGCGGCAGACAACGAGATAAGCTACAAGATCAC
GCACTTTGAGCTCTCGAAGGCGAACTCCGAGCAGCCAGGACCTGCCTATG
ACACCGATTGCCGCAGTACAGTGCTGACTCCGTTGCGCGTATCTGACTAT
GTGAGCATTCCCGATGCATACATGGTCGGCAGGCCAGAGCTGCAGGCCAC
TCACTACTGTGGCAATGGATTGGCTGGCCAGGAGCTAGTGGCCCGGCCGC
CTTTTGTCCTGCGATTCGCCAGTGATTCGCAGTCCAGTGGATCTGAAACG
GGCTTCCAGCTGACCTACACGGTCCGGCGGTCACAGGATTCCCTGGTGTC
CACAGATCTGTAAATTGGCATAAATAAAGCCGGCAGTCTTAACTAAATCA
ACGCACACAAGTCAACTGGAATTGACATTATTAAATGCAGCAGTGATACT
GGCACTGTGAACCAGGACATTCCATGGCCACGGATTTGCCTTAATTAAAT
GCCCGGCTCCGGCATTAAGTCACATGTATCTATATATGCAAATAAATTAT
GGAAAGCAGCAGTGGCATAAAAAAAAAAAAAAAAAA

MIP30282.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:10:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18090132..18090919 788..1 3925 99.9 Minus
chr2L 23010047 chr2L 18089410..18089930 1307..787 2605 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18091469..18092256 788..1 3940 100 Minus
2L 23513712 2L 18090747..18091267 1307..787 2605 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18091469..18092256 788..1 3940 100 Minus
2L 23513712 2L 18090736..18091267 1319..787 2610 99.6 Minus
Blast to na_te.dros performed on 2019-03-16 23:10:32 has no hits.

MIP30282.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:11:37 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18089400..18089928 789..1318 99 <- Minus
chr2L 18090132..18090919 1..788 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:00 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1095 19..1113 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:03:32 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1095 19..1113 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:35:22 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1095 19..1113 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:00 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1095 19..1113 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:03:32 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1317 1..1318 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:35:22 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
CG15153-RA 1..1317 1..1318 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:11:37 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18090737..18091265 789..1318 99 <- Minus
2L 18091469..18092256 1..788 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:11:37 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18090737..18091265 789..1318 99 <- Minus
2L 18091469..18092256 1..788 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:11:37 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18090737..18091265 789..1318 99 <- Minus
2L 18091469..18092256 1..788 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:03:32 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18091469..18092256 1..788 100   Minus
arm_2L 18090737..18091265 789..1318 99 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:04:30 Download gff for MIP30282.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18090737..18091265 789..1318 99 <- Minus
2L 18091469..18092256 1..788 100   Minus

MIP30282.pep Sequence

Translation from 0 to 1112

> MIP30282.pep
QRIGPEMDFHLLMIALVLAPVFTPVHCQVACNARSGPVRQKRIVLSSPGT
GGLAELDTCQYRVAPWSGQVCQVRVDFERLELPQPQLNANSGVLECVDFL
QIQHFRLCGRNSGQHLYIPIRRGQELQLLFRLATSLGRQSTWQLTLTQLE
CPRDSARGVGTRQPEVQTPTVRPILPFLGNFLPRTIFGGQSGIGSGSGPA
AQLIQTFTSPSSADLEMLAPLGCDQYYRTTTGGIVSFNFAGGVYMPNMKY
SICVKGAADNEISYKITHFELSKANSEQPGPAYDTDCRSTVLTPLRVSDY
VSIPDAYMVGRPELQATHYCGNGLAGQELVARPPFVLRFASDSQSSGSET
GFQLTYTVRRSQDSLVSTDL*

MIP30282.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15085-PA 371 GF15085-PA 16..362 15..362 1348 75.6 Plus
Dana\GF13688-PA 391 GF13688-PA 94..389 38..361 419 34.6 Plus
Dana\GF11194-PA 329 GF11194-PA 51..328 59..358 269 27.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:39:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21723-PA 364 GG21723-PA 1..364 7..370 1748 93.1 Plus
Dere\GG20375-PA 391 GG20375-PA 94..389 38..361 414 34 Plus
Dere\GG22502-PA 325 GG22502-PA 49..324 59..358 228 26.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:39:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10141-PA 290 GH10141-PA 116..290 190..365 533 57.4 Plus
Dgri\GH21625-PA 404 GH21625-PA 104..402 38..361 447 33.2 Plus
Dgri\GH20276-PA 324 GH20276-PA 49..324 59..359 270 26.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15153-PA 364 CG15153-PA 1..364 7..370 1908 100 Plus
CG17047-PB 392 CG17047-PB 96..390 39..361 424 34.4 Plus
CG17047-PA 392 CG17047-PA 96..390 39..361 424 34.4 Plus
CG4734-PA 325 CG4734-PA 10..324 16..358 230 26.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22269-PA 350 GI22269-PA 17..349 25..361 1103 62.1 Plus
Dmoj\GI20080-PA 409 GI20080-PA 109..407 38..361 440 34.4 Plus
Dmoj\GI19444-PA 326 GI19444-PA 48..325 58..358 245 26.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15768-PA 369 GL15768-PA 21..356 24..359 1305 71.2 Plus
Dper\GL11007-PA 394 GL11007-PA 90..392 32..361 420 34 Plus
Dper\GL11102-PA 320 GL11102-PA 49..319 59..358 238 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13534-PA 369 GA13534-PA 21..356 24..359 1310 71.5 Plus
Dpse\GA14294-PA 394 GA14294-PA 90..392 32..361 421 34 Plus
Dpse\GA18392-PA 320 GA18392-PA 49..319 59..358 237 27.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17103-PA 363 GM17103-PA 1..363 7..370 1859 96.7 Plus
Dsec\GM21464-PA 391 GM21464-PA 94..389 38..361 428 34.8 Plus
Dsec\GM20287-PA 325 GM20287-PA 49..324 59..358 243 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21847-PA 364 GD21847-PA 1..364 7..370 1894 98.1 Plus
Dsim\GD10961-PA 391 GD10961-PA 94..389 38..361 428 34.5 Plus
Dsim\GD25769-PA 296 GD25769-PA 49..286 59..322 217 27 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20157-PA 352 GJ20157-PA 6..347 11..362 1156 63.4 Plus
Dvir\GJ21172-PA 401 GJ21172-PA 101..399 38..361 457 35.5 Plus
Dvir\GJ21196-PA 325 GJ21196-PA 49..325 59..359 271 27.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18174-PA 362 GK18174-PA 6..362 11..365 1082 61 Plus
Dwil\GK17983-PA 449 GK17983-PA 92..382 32..356 453 34.7 Plus
Dwil\GK17826-PA 330 GK17826-PA 51..329 59..358 255 25.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13113-PA 364 GE13113-PA 1..364 7..370 1806 93.4 Plus
Dyak\GE12537-PA 392 GE12537-PA 95..390 38..361 413 34 Plus
Dyak\GE13371-PA 325 GE13371-PA 49..324 59..358 231 25.8 Plus

MIP30282.hyp Sequence

Translation from 0 to 1112

> MIP30282.hyp
QRIGPEMDFHLLMIALVLAPVFTPVHCQVACNARSGPVRQKRIVLSSPGT
GGLAELDTCQYRVAPWSGQVCQVRVDFERLELPQPQLNANSGVLECVDFL
QIQHFRLCGRNSGQHLYIPIRRGQELQLLFRLATSLGRQSTWQLTLTQLE
CPRDSARGVGTRQPEVQTPTVRPILPFLGNFLPRTIFGGQSGIGSGSGPA
AQLIQTFTSPSSADLEMLAPLGCDQYYRTTTGGIVSFNFAGGVYMPNMKY
SICVKGAADNEISYKITHFELSKANSEQPGPAYDTDCRSTVLTPLRVSDY
VSIPDAYMVGRPELQATHYCGNGLAGQELVARPPFVLRFASDSQSSGSET
GFQLTYTVRRSQDSLVSTDL*

MIP30282.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15153-PA 364 CG15153-PA 1..364 7..370 1908 100 Plus
CG17047-PB 392 CG17047-PB 96..390 39..361 424 34.4 Plus
CG17047-PA 392 CG17047-PA 96..390 39..361 424 34.4 Plus
CG4734-PA 325 CG4734-PA 10..324 16..358 230 26.5 Plus