Clone Sequence Records
MIP30325.complete Sequence
1418 bp assembled on 2011-04-05
GenBank Submission: BT126348.1
> MIP30325.complete
CTGTAGTGTATGCAGCAAGGCAGGAGACCAGGAACCCAGGAAGCAAACTC
CCTGGATGTTGCATGTTCCTGCCGCCAGCAAGGAAATGAAAACGCCCCCA
TGTGTGAGCCAAAAAGCCAACGACCTGGGCAGGGCAGGCACAAACTACAA
AGCGGGGGAAAAAAAAATAAACACACCGGAGTCGGAGGAGTCCTGCCGCA
GAGCAACTATAAAAAGGACACCCTGCAACCGTGTGTACCGGAGTCTCTAT
CGGTGTCAGCCAGCAGCTTACAAAGTCAGACGCATTTGTGTGTGTATCTG
TGTGTGCCGAACGAAGGACGCTCCCAGCTTTTAAGTATAATTTTCCAGAT
ACACAGGCCGAGCACTGGAGTCCAGGTGGCAACTGCTAGACAAAAACGAT
GTGCACGCCCCCACAAAAAACACACACACACACAGAGACAAGAACGTACA
GGAGCAGAAGGACCAGAAGGACCAGCCAGCTAAACGAGTAGGTGGAGAAA
ATTTAATATGATTATGTTGAAGTAAATTGCTTGAAACAAATGTTGCATGG
GCATCCGCCCAGCGATCTCCACCTGTGCATGTGCATATGTACATACATAC
ATATACACACCCATCTATTTGGCAGCCAGACTTTGATTCACTCAGTTGGC
AGACCTTTAAAAAGCAATTAAGGACAATACGATTTGCTCCTCAAAGGCTA
CAAGCTGTCAACGAGTTGAGAATGATGGTGGGTAAGTTCTGCCCTTATTG
TGTGGCCAATAAAATACTATATGGGCTGCAGTGATTTGCAAACAATATAA
ATAAATTATGTTAGAGCTAACAACAATTGATACTGTTTGGTATGTAATGT
ATTTTTTACATTTTCATTAACAGACGCAAGAAGTTTAACGAGCCAAAATC
ATTAGACTAATTATTGCCGCCTCATTAGCGAGCTATCAAATAATGATATG
CCATTATTGCTGTCATCCCGTTGGTTGGTCATCAGAATGTGTATCTCTAA
TACTAATTAAAATTATCAAATGATGTGCACACGAATCCACAGAAAAAGCG
CAGGCAGAGCGAACGTAGTTGGCATGTCTGCAATGTGGCATGCCGCCGTT
GGCAAATCAATTGACATGCCGCGATGCCAATCGTCAACAGCCCTCAGTCC
ATGATAATTAAATTGCACATTGCATTTTATTGCAATTCAATTAAAATATA
AAATATTTTTCAATTGGTTCACTGAAGCGGTTAGCCGTCGTTCGACTCCG
AGCCACGTAATTAAATTAATCAACGATGCTTTCACTCATTGCCACCATTG
CTGCCAACGTCTATCTGCTACCAACATGTGAAACAATTCGGTGGTAATAC
GTATATACATATTTCCCATGAAAAATAAATAGCACAAAAAAAGGGTTCAA
AAAAAAAAAAAAAAAAAA
MIP30325.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:56:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 22607472..22608869 | 1..1398 | 6990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:56:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26784356..26785756 | 1..1401 | 7005 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 26525187..26526587 | 1..1401 | 7005 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 22:56:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 596..623 | 583..610 | 113 | 89.3 | Plus |
MIP30325.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:57:28 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 22607472..22608869 | 1..1398 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-07 17:26:37 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RA | 114..402 | 1..289 | 100 | == | Plus |
CG42790-RA | 403..537 | 349..483 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:01:54 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RB | 1..474 | 10..483 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:34:00 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RB | 1..474 | 10..483 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-07 17:26:36 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RA | 114..402 | 1..289 | 100 | == | Plus |
CG42790-RA | 403..537 | 349..483 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:01:54 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RB | 19..1416 | 1..1398 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:00 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42790-RB | 19..1416 | 1..1398 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:28 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26784356..26785753 | 1..1398 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:28 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26784356..26785753 | 1..1398 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:57:28 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26784356..26785753 | 1..1398 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:01:54 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22610078..22611475 | 1..1398 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:18 Download gff for
MIP30325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26525187..26526584 | 1..1398 | 100 | | Plus |
MIP30325.pep Sequence
Translation from 9 to 482
> MIP30325.pep
MQQGRRPGTQEANSLDVACSCRQQGNENAPMCEPKSQRPGQGRHKLQSGG
KKNKHTGVGGVLPQSNYKKDTLQPCVPESLSVSASSLQSQTHLCVYLCVP
NEGRSQLLSIIFQIHRPSTGVQVATARQKRCARPHKKHTHTQRQERTGAE
GPEGPAS*
Sequence MIP30325.pep has no blast hits.
MIP30325.hyp Sequence
Translation from 9 to 482
> MIP30325.hyp
MQQGRRPGTQEANSLDVACSCRQQGNENAPMCEPKSQRPGQGRHKLQSGG
KKNKHTGVGGVLPQSNYKKDTLQPCVPESLSVSASSLQSQTHLCVYLCVP
NEGRSQLLSIIFQIHRPSTGVQVATARQKRCARPHKKHTHTQRQERTGAE
GPEGPAS*
MIP30325.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42790-PB | 157 | CG42790-PB | 1..157 | 1..157 | 840 | 100 | Plus |
CG42790-PC | 106 | CG42790-PC | 1..93 | 1..93 | 496 | 100 | Plus |