Clone MIP30551 Report

Search the DGRC for MIP30551

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:305
Well:51
Vector:pOT2
Associated Gene/Transcriptcmpy-RC
Protein status:MIP30551.pep: gold
Sequenced Size:1632

Clone Sequence Records

MIP30551.complete Sequence

1632 bp assembled on 2011-06-10

GenBank Submission: BT128740.1

> MIP30551.complete
CCGCGTGCGGCAGACAAAAGCGCATGAAAAATTCATTGGGAACCGTCGGA
ACCGAAAGTTTAGCGTCAGGATAGCGACAACAACAAGGACCACGGCACTA
CTATAGCGAATATAGTATATCGAGTGCTAGTCCTAAACGTCTATCGTTAG
GTGTAACGAGTCAACATGCAAATTGCCTGCGCCGGACCCGCAGTCGAATC
CAGGGCCAGAATCCTTGCCAGGCATCCTCATCATCAGCAGCAGCATCATC
ATCATTGGAGGCAGTGGAACGCAAACGCACCGTAGAGCCAGCCAACAGGG
CGCAATAAAAATTGCCTTTCGATAAATGGGCGGAAGTGCCAGAGGCGTGG
GGCGGAGGGGCGTGGTCCTGGAGCAGGATGTACGCACAAGGTCGTCGCAG
GGGGAGCGAAAGAGGGGGCTCGCTGGCAAACAGCAGCACAACAATGCCAA
GCTTCCGCTTAGGATGCGCTCGAACGGAAGTTATTTTGGCCGCCTGAACG
TGAGCGCGCTGCTCATCTACTTGTGGTGCTATCTGCTACTGGTTATGGCA
GCATCTGGCGGCAGCAACCACGTGGTAAATGGCCTCAAATGCTATTGCAA
TCCGAAGGAGTGCGACGTGATCCGCTCACCCGACTGCCCCGGAAAAGGAC
TTATGCTGTGGGATCCATGCAAATGTTGCCGCATATGCGCCAAAACTTTG
GGCGAATCCTGCGGCGGTCCGGGCGGATTTTCCGGTCAATGTGAGCCGCC
CCTGCAGTGTGTGACCAAGCTGCCCATTAGCAGCGGATTGGGCGTGTGCA
TGGATTTGCAGCACCTGACCGCCCTGACCTACAGTCAGCACGATAATTGT
TCCGACAGCGATTCGATTGTTTTGGAGCCGGGCTGCGAGATCACCAACAA
ACGCTGCCAGTGCTGGCCAACTATGCGCACCTGTCTCAGCGAACTGACCA
GCGATGGGGGATCCCCCGACGACTCTCGCTGGCACTTCAAGAACCTAGAG
GACTGCCAGTTGAATCTACAAAATCTAATAAAACTCGAACAGGAATTCGA
TGAAGACTACAAAATCTCACCGAGCAAATTCACATACAAAAAACTACGCA
GAAAGCGAAAATCTTTAAAGAAACGAATCATCATCTTGAAGGATTGAGCC
CTGAATGCGCCATTGCGACTTTCTGCGTTCCCAGCTCTTAACTCAATAAA
ACAAAATGAGGAATCTCTGTACAGATAGTATGCTTACTTCTAACTAATTA
TATGGCTATTATTAATAACGTACATATATAACAACATATACATATACATG
AGGAAAAAGTACATATGAGAAATAGACAAAATGTATGTATCCTAAGACAT
TTGTTACTTTATTGTTTTTAGAAAGCGCGTACGTATGTATAAATTTGCAA
TTTTTATTCCTACTGCCCCCGAAAAGAAAATATACAAAACAATAAATTGA
AAACATTTACAAAATGTTATTGCTTTAAACAGATAACAAATACGAAATGT
GCAAAATGTTGGAATTTTCCATAGGCCTAAGTCAAGCCATTCAATAAACA
ATAAAGCCGAATGACAAATTTTGCTAACTGAAACAGCATCGAAAATATAT
AAGTGGTCAGAAAACAAAAAAAAAAAAAAAAA

MIP30551.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20705811..20706324 672..159 2570 100 Minus
chr3L 24539361 chr3L 20701826..20702312 1615..1129 2435 100 Minus
chr3L 24539361 chr3L 20702692..20702890 1001..803 995 100 Minus
chr3L 24539361 chr3L 20708022..20708181 160..1 800 100 Minus
chr3L 24539361 chr3L 20704565..20704699 803..669 660 99.3 Minus
chr3L 24539361 chr3L 20702496..20702625 1128..999 650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20716799..20717312 672..159 2570 100 Minus
3L 28110227 3L 20712811..20713300 1618..1129 2450 100 Minus
3L 28110227 3L 20713680..20713878 1001..803 995 100 Minus
3L 28110227 3L 20719010..20719169 160..1 800 100 Minus
3L 28110227 3L 20715553..20715687 803..669 660 99.3 Minus
3L 28110227 3L 20713484..20713613 1128..999 650 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20709899..20710412 672..159 2570 100 Minus
3L 28103327 3L 20705911..20706400 1618..1129 2450 100 Minus
3L 28103327 3L 20706780..20706978 1001..803 995 100 Minus
3L 28103327 3L 20712110..20712269 160..1 800 100 Minus
3L 28103327 3L 20708653..20708787 803..669 660 99.2 Minus
3L 28103327 3L 20706584..20706713 1128..999 650 100 Minus
Blast to na_te.dros performed 2019-03-15 10:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 4735..4814 1425..1508 147 71.8 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 727..794 1424..1492 135 68.1 Plus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 655..760 1392..1507 133 64.1 Plus
Stalker4 7359 Stalker4 STALKER4 7359bp 238..365 1305..1171 118 59.9 Minus
Stalker4 7359 Stalker4 STALKER4 7359bp 7194..7321 1305..1171 118 59.9 Minus
Stalker 7256 Stalker STALKER 7256bp 238..365 1305..1171 118 59.9 Minus
Stalker 7256 Stalker STALKER 7256bp 7087..7214 1305..1171 118 59.9 Minus
rover 7318 rover ROVER 7318bp 5228..5433 1272..1465 115 58.2 Plus
Tirant 8526 Tirant TIRANT 8526bp 7017..7090 1385..1456 112 64.9 Plus

MIP30551.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:42:41 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20701826..20702312 1129..1615 100 <- Minus
chr3L 20702496..20702623 1001..1128 100 <- Minus
chr3L 20702693..20702889 804..1000 100 <- Minus
chr3L 20704565..20704695 673..803 100 <- Minus
chr3L 20705811..20706322 161..672 100 <- Minus
chr3L 20708022..20708181 1..160 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-10 09:12:26 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
CG13253-RC 1..822 326..1147 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:47 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
cmpy-RC 1..822 326..1147 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:09:28 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
cmpy-RC 1..822 326..1147 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-10 09:12:25 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
CG13253-RC 30..1220 1..1191 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:47 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
cmpy-RC 32..1622 1..1591 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:28 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
cmpy-RC 32..1622 1..1591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:41 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20712814..20713300 1129..1615 100 <- Minus
3L 20713484..20713611 1001..1128 100 <- Minus
3L 20713681..20713877 804..1000 100 <- Minus
3L 20715553..20715683 673..803 100 <- Minus
3L 20716799..20717310 161..672 100 <- Minus
3L 20719010..20719169 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:41 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20712814..20713300 1129..1615 100 <- Minus
3L 20713484..20713611 1001..1128 100 <- Minus
3L 20713681..20713877 804..1000 100 <- Minus
3L 20715553..20715683 673..803 100 <- Minus
3L 20716799..20717310 161..672 100 <- Minus
3L 20719010..20719169 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:41 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20712814..20713300 1129..1615 100 <- Minus
3L 20713484..20713611 1001..1128 100 <- Minus
3L 20713681..20713877 804..1000 100 <- Minus
3L 20715553..20715683 673..803 100 <- Minus
3L 20716799..20717310 161..672 100 <- Minus
3L 20719010..20719169 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:47 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20706781..20706977 804..1000 100 <- Minus
arm_3L 20708653..20708783 673..803 100 <- Minus
arm_3L 20705914..20706400 1129..1615 100 <- Minus
arm_3L 20706584..20706711 1001..1128 100 <- Minus
arm_3L 20709899..20710410 161..672 100 <- Minus
arm_3L 20712110..20712269 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:08:00 Download gff for MIP30551.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20705914..20706400 1129..1615 100 <- Minus
3L 20706584..20706711 1001..1128 100 <- Minus
3L 20706781..20706977 804..1000 100 <- Minus
3L 20708653..20708783 673..803 100 <- Minus
3L 20709899..20710410 161..672 100 <- Minus
3L 20712110..20712269 1..160 100   Minus

MIP30551.pep Sequence

Translation from 325 to 1146

> MIP30551.pep
MGGSARGVGRRGVVLEQDVRTRSSQGERKRGLAGKQQHNNAKLPLRMRSN
GSYFGRLNVSALLIYLWCYLLLVMAASGGSNHVVNGLKCYCNPKECDVIR
SPDCPGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCEPPLQCVTKLP
ISSGLGVCMDLQHLTALTYSQHDNCSDSDSIVLEPGCEITNKRCQCWPTM
RTCLSELTSDGGSPDDSRWHFKNLEDCQLNLQNLIKLEQEFDEDYKISPS
KFTYKKLRRKRKSLKKRIIILKD*

MIP30551.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:55:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24119-PA 230 GF24119-PA 1..227 1..236 894 79.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13290-PA 268 GG13290-PA 1..268 1..268 1385 97 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16980-PA 181 GH16980-PA 1..178 47..225 757 85.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
cmpy-PD 273 CG13253-PD 1..273 1..273 1491 100 Plus
cmpy-PC 273 CG13253-PC 1..273 1..273 1491 100 Plus
cmpy-PB 116 CG13253-PB 1..116 1..116 627 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:55:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11895-PA 312 GI11895-PA 69..305 36..273 919 85.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:55:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12759-PA 192 GL12759-PA 1..177 1..159 628 72.9 Plus
Dper\GL12760-PA 120 GL12760-PA 2..120 154..273 470 85 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:55:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12155-PA 132 GA12155-PA 1..113 47..159 568 94.7 Plus
Dpse\GA28215-PA 120 GA28215-PA 2..120 154..273 470 85 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:55:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22196-PA 268 GM22196-PA 1..268 1..268 1415 99.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:55:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12171-PA 273 GD12171-PA 1..273 1..273 1435 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13772-PA 221 GJ13772-PA 1..207 47..254 905 86.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10539-PA 223 GK10539-PA 1..215 47..225 699 70.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22953-PA 268 GE22953-PA 1..268 1..268 1388 96.6 Plus
Dyak\GE22388-PA 226 GE22388-PA 1..225 1..225 1160 96 Plus

MIP30551.hyp Sequence

Translation from 325 to 1146

> MIP30551.hyp
MGGSARGVGRRGVVLEQDVRTRSSQGERKRGLAGKQQHNNAKLPLRMRSN
GSYFGRLNVSALLIYLWCYLLLVMAASGGSNHVVNGLKCYCNPKECDVIR
SPDCPGKGLMLWDPCKCCRICAKTLGESCGGPGGFSGQCEPPLQCVTKLP
ISSGLGVCMDLQHLTALTYSQHDNCSDSDSIVLEPGCEITNKRCQCWPTM
RTCLSELTSDGGSPDDSRWHFKNLEDCQLNLQNLIKLEQEFDEDYKISPS
KFTYKKLRRKRKSLKKRIIILKD*

MIP30551.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
cmpy-PD 273 CG13253-PD 1..273 1..273 1491 100 Plus
cmpy-PC 273 CG13253-PC 1..273 1..273 1491 100 Plus
cmpy-PB 116 CG13253-PB 1..116 1..116 627 100 Plus