Clone MIP30824 Report

Search the DGRC for MIP30824

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:308
Well:24
Vector:pOT2
Associated Gene/TranscriptCG14317-RA
Protein status:MIP30824.pep: gold
Sequenced Size:1570

Clone Sequence Records

MIP30824.complete Sequence

1570 bp assembled on 2011-07-20

GenBank Submission: BT128766.1

> MIP30824.complete
CAGTCATCACATTTGACAGACAATACATACAATGTCGCAAATGCACAATA
CCGCATTCTACAAGGACGCTCTGGTTGCCCAGCAAAATAATACCTGTTCA
CCGATGGAGGAAATTGAACCGAACTACATCGACAACCTGCACATTATATT
TTTCGAGCAGATTTTCGAAGAGATCGACAATCTGATCGATCAGGTACGCA
TGGCTAGGGCCTATCCACAGTTCATGCCACAGATTCTCAAGTTCTGGCAG
AGGCGACTGCACCTGATCATCGGTCCAAATACACCATTCCTTGGACTCCT
GGACATCGATGACTATGTCTTCTTTATGGAACACATGGCTGATAGCTTCA
CGGATCTGCACGTTCACGACGGCGTTGGTTCCTTTTCTGAATTCTACGAC
TATATCACACACCTGTGCGATATCAATATCACCAAGTTTCCCAAGGTGGA
CACTTGCATATTGGCGGGCAATCCCAACACAGTGGTCGATGAGGACATCC
GCGACTTGACGGTAATGTTGCCCAATCTCAAGCGCCTAATGACCTGCATG
AATCTATCTGGCTTATATATGCGTGGCTTCAAGAAGTTGGAGGAGCTGGT
ATTCAACTCCTTGTACCATTCGGTGCCATTGGATAGCCGCTGGATTCAGG
ATATCTGTCTGACAATGACCAATTTGAGAGTCCTTGACATTACCGATCAG
TTCGACAGTTGTGTGAGACTCACAGACATCAAATTGCCCAATCTGGAAGT
GCTAAAAATCAACTTGAGCACCGTAGAATGCATGCTATCGGAGGTGCTGC
AGTTGCCCAAGTTACAGAAACTATCCGTGCGATTCGATGATTCGCGGCAA
TTGAACGCAGATCAGGAGACCATCTTCCAGCAGATTGTGGTGGCCAAAAG
CGAAAGGATCACCCGAATTGCCCTGAACAACGAAGTGGTTCAATTGCCAG
CTCGGTGGCAGCAAAGTTTGCTCCTCGAACTGCCCAAGCTGAGGAAGGTG
ATATGCGAGAATTGGTGCCACAATGATTTCTTCCTGGATCGCCAGCACAT
GCCCTGCCAACAAATGGAGGTGCTCAGCTTCAGTGGCTGGGAGATTGTGC
GGGAGACTCAGCTCCTGGAACTGGTCGCCGAGTGCGTCAATCTGGAGCAC
TTGGCTCTGAACGGCTACCACAGCAACTGGGAGAAACTTACTAAGCTCGT
GAATATTCGCAATCAGGAAAGGAATCCCAGACCACTGCAGGTGTTCAGCG
ACATGATGTGGGGCAACTTCACACCCGAGGAATATTATCACTGGCAGAGC
AACAAATATGTTCAGGTCACCTGTGACAGCAGCGAATACGAATATCAGGA
GGATGGTTTCGAGTTTGATTTTGAGTGAATAACAGCTCAACAATTTTACC
AATTGTATATACTCCTAAACAAATATTTTTTTTCATGAATTTTGTAATTT
TTTATATTTTCTATTGTATATAAATAAGACGCACTGGCTAAATCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

MIP30824.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:47:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13905429..13906925 1..1498 7320 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18081090..18082587 1..1498 7490 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17821921..17823418 1..1498 7490 100 Plus
Blast to na_te.dros performed 2019-03-15 10:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 1109..1241 1275..1409 113 59.3 Plus

MIP30824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:48:06 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13905429..13906921 1..1494 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-07-20 13:29:59 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1347 32..1378 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:25:21 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1347 32..1378 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:12:09 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1347 32..1378 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-20 13:29:58 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1347 32..1378 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:25:21 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 1..1347 32..1378 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:09 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
CG14317-RA 43..1536 1..1494 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:06 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18081090..18082583 1..1494 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:06 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18081090..18082583 1..1494 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:48:06 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18081090..18082583 1..1494 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:25:21 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13906812..13908305 1..1494 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:09:20 Download gff for MIP30824.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17821921..17823414 1..1494 100   Plus

MIP30824.pep Sequence

Translation from 31 to 1377

> MIP30824.pep
MSQMHNTAFYKDALVAQQNNTCSPMEEIEPNYIDNLHIIFFEQIFEEIDN
LIDQVRMARAYPQFMPQILKFWQRRLHLIIGPNTPFLGLLDIDDYVFFME
HMADSFTDLHVHDGVGSFSEFYDYITHLCDINITKFPKVDTCILAGNPNT
VVDEDIRDLTVMLPNLKRLMTCMNLSGLYMRGFKKLEELVFNSLYHSVPL
DSRWIQDICLTMTNLRVLDITDQFDSCVRLTDIKLPNLEVLKINLSTVEC
MLSEVLQLPKLQKLSVRFDDSRQLNADQETIFQQIVVAKSERITRIALNN
EVVQLPARWQQSLLLELPKLRKVICENWCHNDFFLDRQHMPCQQMEVLSF
SGWEIVRETQLLELVAECVNLEHLALNGYHSNWEKLTKLVNIRNQERNPR
PLQVFSDMMWGNFTPEEYYHWQSNKYVQVTCDSSEYEYQEDGFEFDFE*

MIP30824.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16754-PA 236 GF16754-PA 1..216 1..216 935 79.7 Plus
Dana\GF23504-PA 456 GF23504-PA 9..362 15..374 216 25.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22626-PA 447 GG22626-PA 1..447 1..448 2340 97.3 Plus
Dere\GG13196-PA 454 GG13196-PA 19..365 43..377 232 25.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15067-PA 445 GH15067-PA 2..444 4..447 1821 76 Plus
Dgri\GH17139-PA 467 GH17139-PA 30..375 41..374 229 26.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-PA 448 CG14317-PA 1..448 1..448 2388 100 Plus
CG7148-PA 454 CG7148-PA 19..362 43..374 247 25.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23712-PA 445 GI23712-PA 2..444 4..447 1823 76 Plus
Dmoj\GI11747-PA 468 GI11747-PA 31..376 41..374 215 26.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:10:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12587-PA 449 GL12587-PA 24..448 24..447 1775 76.2 Plus
Dper\GL25325-PA 356 GL25325-PA 16..267 130..377 186 27.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12904-PA 449 GA12904-PA 24..448 24..447 1779 76.5 Plus
Dpse\GA20138-PA 463 GA20138-PA 27..374 41..377 196 24.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15274-PA 447 GM15274-PA 1..447 1..448 2365 98.4 Plus
Dsec\GM22107-PA 454 GM22107-PA 19..362 43..374 236 25.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19199-PA 411 GD19199-PA 1..411 1..448 2108 90.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23271-PA 445 GJ23271-PA 2..444 4..447 1841 77.1 Plus
Dvir\GJ13457-PA 467 GJ13457-PA 13..375 24..374 219 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11239-PA 444 GK11239-PA 2..444 4..448 1884 77.9 Plus
Dwil\GK21188-PA 81 GK21188-PA 14..75 49..109 230 67.7 Plus
Dwil\GK20358-PA 467 GK20358-PA 17..376 27..374 208 25.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25510-PA 447 GE25510-PA 1..447 1..448 2316 96.2 Plus
Dyak\GE19518-PA 454 GE19518-PA 19..365 43..377 219 23.5 Plus

MIP30824.hyp Sequence

Translation from 31 to 1377

> MIP30824.hyp
MSQMHNTAFYKDALVAQQNNTCSPMEEIEPNYIDNLHIIFFEQIFEEIDN
LIDQVRMARAYPQFMPQILKFWQRRLHLIIGPNTPFLGLLDIDDYVFFME
HMADSFTDLHVHDGVGSFSEFYDYITHLCDINITKFPKVDTCILAGNPNT
VVDEDIRDLTVMLPNLKRLMTCMNLSGLYMRGFKKLEELVFNSLYHSVPL
DSRWIQDICLTMTNLRVLDITDQFDSCVRLTDIKLPNLEVLKINLSTVEC
MLSEVLQLPKLQKLSVRFDDSRQLNADQETIFQQIVVAKSERITRIALNN
EVVQLPARWQQSLLLELPKLRKVICENWCHNDFFLDRQHMPCQQMEVLSF
SGWEIVRETQLLELVAECVNLEHLALNGYHSNWEKLTKLVNIRNQERNPR
PLQVFSDMMWGNFTPEEYYHWQSNKYVQVTCDSSEYEYQEDGFEFDFE*

MIP30824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14317-PA 448 CG14317-PA 1..448 1..448 2388 100 Plus
CG7148-PA 454 CG7148-PA 19..362 43..374 247 25.2 Plus