Clone Sequence Records
MIP30847.complete Sequence
453 bp assembled on 2011-06-09
GenBank Submission: BT128725.1
> MIP30847.complete
CACAAACGTTCGATAACCACAAGTTAAAGTTTTTAACTCACAACAAAATA
CCAAAATGTTCCGCATTATCGCTGTAATCTTCGCCCTGGTAGCAATGGCT
TTTGCTGCTCCTGGTTACATTGAGCCCTCCTACGGAGTGGTTCCTGTGGC
CCAGGTGGTGCCCGTGGTGAAATCTGTTCCGGTGGTGAAGCATGTTCCAG
TGGTGCAGCATGTTCCGGTGGTGAAAAATGTCCCAGTGGTTCAGCATGTC
CCTGTGCTGAAGTCCTACGCTGTTCCCACCTATGGACACCACATCTACCA
TGGTTAAATTATTGTAGCACAACCCCATTAGAAATTGACCCGACATAAAT
AAATTGCCAACCAAATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
MIP30847.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:36:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 500962..501264 | 68..370 | 1515 | 100 | Plus |
chr3L | 24539361 | chr3L | 499936..500160 | 310..68 | 805 | 89.7 | Minus |
chr3L | 24539361 | chr3L | 500832..500898 | 1..67 | 335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:36:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 501100..501402 | 68..370 | 1515 | 100 | Plus |
3L | 28110227 | 3L | 500074..500298 | 310..68 | 805 | 89.7 | Minus |
3L | 28110227 | 3L | 500970..501036 | 1..67 | 335 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 501100..501402 | 68..370 | 1515 | 100 | Plus |
3L | 28103327 | 3L | 500128..500298 | 238..68 | 600 | 90 | Minus |
3L | 28103327 | 3L | 500074..500202 | 310..182 | 555 | 95.3 | Minus |
3L | 28103327 | 3L | 500970..501036 | 1..67 | 335 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 10:36:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord2 | 7650 | accord2 QBERT 7650bp | 3680..3739 | 81..22 | 120 | 66.7 | Minus |
MIP30847.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 500832..500898 | 1..67 | 100 | -> | Plus |
chr3L | 500962..501262 | 68..368 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-09 11:48:10 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 1..252 | 56..307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:01 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 1..252 | 56..307 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:08:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 1..252 | 56..307 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-09 11:48:09 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 7..345 | 1..339 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:01 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 6..373 | 1..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34268-RA | 6..373 | 1..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 500970..501036 | 1..67 | 100 | -> | Plus |
3L | 501100..501400 | 68..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 500970..501036 | 1..67 | 100 | -> | Plus |
3L | 501100..501400 | 68..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:38 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 500970..501036 | 1..67 | 100 | -> | Plus |
3L | 501100..501400 | 68..368 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:01 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 501100..501400 | 68..368 | 100 | | Plus |
arm_3L | 500970..501036 | 1..67 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:40 Download gff for
MIP30847.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 501100..501400 | 68..368 | 100 | | Plus |
3L | 500970..501036 | 1..67 | 100 | -> | Plus |
MIP30847.pep Sequence
Translation from 55 to 306
> MIP30847.pep
MFRIIAVIFALVAMAFAAPGYIEPSYGVVPVAQVVPVVKSVPVVKHVPVV
QHVPVVKNVPVVQHVPVLKSYAVPTYGHHIYHG*
MIP30847.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14724-PA | 92 | GG14724-PA | 1..92 | 1..83 | 148 | 59.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34268-PA | 83 | CG34268-PA | 1..83 | 1..83 | 429 | 100 | Plus |
CG34267-PA | 77 | CG34267-PA | 1..77 | 1..83 | 380 | 92.8 | Plus |
CG15308-PB | 95 | CG15308-PB | 5..70 | 5..70 | 140 | 48.5 | Plus |
CG15308-PC | 82 | CG15308-PC | 1..57 | 14..70 | 134 | 52.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14341-PA | 83 | GM14341-PA | 1..83 | 1..83 | 371 | 97.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:54:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD11017-PA | 83 | GD11017-PA | 1..83 | 1..83 | 371 | 97.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:54:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21086-PA | 77 | GE21086-PA | 1..77 | 1..83 | 155 | 80.7 | Plus |
MIP30847.hyp Sequence
Translation from 55 to 306
> MIP30847.hyp
MFRIIAVIFALVAMAFAAPGYIEPSYGVVPVAQVVPVVKSVPVVKHVPVV
QHVPVVKNVPVVQHVPVLKSYAVPTYGHHIYHG*
MIP30847.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34268-PA | 83 | CG34268-PA | 1..83 | 1..83 | 429 | 100 | Plus |
CG34267-PA | 77 | CG34267-PA | 1..77 | 1..83 | 380 | 92.8 | Plus |
CG15308-PB | 95 | CG15308-PB | 5..70 | 5..70 | 140 | 48.5 | Plus |
CG15308-PC | 82 | CG15308-PC | 1..57 | 14..70 | 134 | 52.6 | Plus |