Clone MIP31041 Report

Search the DGRC for MIP31041

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:310
Well:41
Vector:pOT2
Associated Gene/TranscriptCG32182-RA
Protein status:MIP31041.pep: gold
Sequenced Size:1473

Clone Sequence Records

MIP31041.complete Sequence

1473 bp assembled on 2011-06-09

GenBank Submission: BT128720.1

> MIP31041.complete
CGCGCTTCCTGCTCAGTCGAACGGGCTTGCTCAGCTGCAACAGATCGAGT
AGGATGCGATTTAAGACGAGTATAACCATTGGCCACGGAGAGCCACCCAG
GAATCGGCGGCTAATGGAGCTGGACGACGACTGTCTGCTAATGATTTGCG
AACATCTAGCGCTGGGAGACCAACTGAGACTGATGGAGGTGCAGGAGGAA
CGATTTTCGAGCTTGATACTGCAATTGTGGTCCAACAGATACGCCAAGCT
ATTTGATTTTCGCCGGGAGCAGCAATTAAACCTGCTAAAGCCCGACGAGC
TGGCTCAAATATTGGATCACTTAGGCTGGCGAACAAGAGCGTTAATTAAC
CTGCCAGGTACAGGCGAAGGATGCCGGAAGTGGCTCAAGCGGATGCGACA
AAGCCTCAACCATTTGCAGATACTCAGTTTCACGAAAAGCAATACATTGG
TAATACAGAAACTCCCCTACCTGTGCCCCAATGTGGTGGACCTTAAGCTT
GGCGAGTGCGAGGGTTTAACACCCCTTGATGTGGATTTCATGTTTGAAAA
CCTTAAAAACCTAAGAGAATTTGAAATGCGCTCTAGTTGGAACTGCAGCC
AACAGAGGTACCAGTATCCCAGAAATCTGGAGATCCTGAAACTACCAGCT
TGTATGATTACCGCCTGTGTTTCTCAGATCTTTCAATTGCCCCGACTCCG
TCTATTGACAGCTTTTCTGTGTCGAAATTCCGAGCACGGCCACCTGGACA
ATGATGGCAAGGCGAATTGCAGTGGCACAGGAACTTTGTCCGCGTGCCTG
CAGCAAATTCGAGGTCGCAATTGTCGGATTGTGGGTCTCCGTTTGCAGTG
TCGACTGGATGACTGCCTGCCAGTCGTCGACGTGAAGGAGGTATTCCGGC
TGCAATCCTTTGCTTGGCACTCGCAGCTGACGGTGCACTATGATGTGGCG
GACGGGAGCGTCAAGTGGATGCCACAGCGACCGCAGGCCGTGCGGTCCCT
CCTTCGCTTCCTAGCCACCCAGGCGGCCAGTTTGCGGGAATTGAATTTCA
CGCGTAACGCACATGCCACGCCCACATTTCTCGCACAACTGGACGCCCAC
TTGAAGCGGGCCGGCGGATGTCCATCCCCCCAACTGACAAATACGGATGC
GGATGTAGAAGCGGATAGGGGTGCGGATGCGGATACGGCTGAGACAAACG
ATTTGGCGTTTGTCGAGCTGAAATTGCTGCATTTGCCTAATGAACAAATG
GAAGCGGGCACCGTAGACAGCGATGAGGGATTAGGCCAAAAGGATAATGG
ATTGCTGATGTAGGGGGCGAATAACAGCAAATTAGGTAAATCTCGTGTGC
TGCCCCTGAGTATTTAAAGTGAACATGAACTCATTGTGTTATTTCTTTAA
GCAATATTCAATAATAAATATGTTTTTAAATTAGAGCAAAGTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

MIP31041.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17747743..17749184 1..1442 7210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17758112..17759555 1..1444 7220 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17751212..17752655 1..1444 7220 100 Plus
3R 31820162 3R 18347410..18347456 1473..1427 205 95.7 Minus
2R 25260384 2R 513562..513607 1473..1428 200 95.6 Minus
3L 28103327 3L 24020429..24020472 1427..1470 190 95.4 Plus
3R 31820162 3R 13926349..13926395 1427..1473 190 93.6 Plus
3R 31820162 3R 17802470..17802516 1473..1427 190 93.6 Minus
Blast to na_te.dros performed on 2019-03-15 10:41:23 has no hits.

MIP31041.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:42:28 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17747743..17749184 1..1442 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-09 14:42:03 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1260 54..1313 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:21 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1260 54..1313 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:09:02 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1260 54..1313 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-09 14:42:02 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1260 54..1313 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:21 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1442 1..1442 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:02 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
CG32182-RA 1..1442 1..1442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:28 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17758112..17759553 1..1442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:28 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17758112..17759553 1..1442 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:28 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17758112..17759553 1..1442 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:21 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17751212..17752653 1..1442 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:49 Download gff for MIP31041.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17751212..17752653 1..1442 100   Plus

MIP31041.pep Sequence

Translation from 2 to 1312

> MIP31041.pep
RFLLSRTGLLSCNRSSRMRFKTSITIGHGEPPRNRRLMELDDDCLLMICE
HLALGDQLRLMEVQEERFSSLILQLWSNRYAKLFDFRREQQLNLLKPDEL
AQILDHLGWRTRALINLPGTGEGCRKWLKRMRQSLNHLQILSFTKSNTLV
IQKLPYLCPNVVDLKLGECEGLTPLDVDFMFENLKNLREFEMRSSWNCSQ
QRYQYPRNLEILKLPACMITACVSQIFQLPRLRLLTAFLCRNSEHGHLDN
DGKANCSGTGTLSACLQQIRGRNCRIVGLRLQCRLDDCLPVVDVKEVFRL
QSFAWHSQLTVHYDVADGSVKWMPQRPQAVRSLLRFLATQAASLRELNFT
RNAHATPTFLAQLDAHLKRAGGCPSPQLTNTDADVEADRGADADTAETND
LAFVELKLLHLPNEQMEAGTVDSDEGLGQKDNGLLM*

MIP31041.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10547-PA 428 GF10547-PA 1..421 18..415 1012 52.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13632-PA 425 GG13632-PA 1..411 18..422 1867 86.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18005-PA 861 GH18005-PA 7..187 237..411 328 43.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32182-PA 419 CG32182-PA 1..419 18..436 2209 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24914-PA 476 GL24914-PA 54..469 37..415 833 46.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16740-PA 474 GA16740-PA 54..467 37..415 834 46.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25718-PA 438 GM25718-PA 15..432 1..422 2087 93.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14725-PA 404 GD14725-PA 15..398 1..422 1884 86.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12305-PA 247 GK12305-PA 2..163 40..194 308 41.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19927-PA 334 GE19927-PA 1..303 18..319 1320 85.1 Plus

MIP31041.hyp Sequence

Translation from 2 to 1312

> MIP31041.hyp
RFLLSRTGLLSCNRSSRMRFKTSITIGHGEPPRNRRLMELDDDCLLMICE
HLALGDQLRLMEVQEERFSSLILQLWSNRYAKLFDFRREQQLNLLKPDEL
AQILDHLGWRTRALINLPGTGEGCRKWLKRMRQSLNHLQILSFTKSNTLV
IQKLPYLCPNVVDLKLGECEGLTPLDVDFMFENLKNLREFEMRSSWNCSQ
QRYQYPRNLEILKLPACMITACVSQIFQLPRLRLLTAFLCRNSEHGHLDN
DGKANCSGTGTLSACLQQIRGRNCRIVGLRLQCRLDDCLPVVDVKEVFRL
QSFAWHSQLTVHYDVADGSVKWMPQRPQAVRSLLRFLATQAASLRELNFT
RNAHATPTFLAQLDAHLKRAGGCPSPQLTNTDADVEADRGADADTAETND
LAFVELKLLHLPNEQMEAGTVDSDEGLGQKDNGLLM*

MIP31041.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32182-PA 419 CG32182-PA 1..419 18..436 2209 100 Plus