Clone MIP31077 Report

Search the DGRC for MIP31077

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:310
Well:77
Vector:pOT2
Associated Gene/TranscriptCG11349-RB
Protein status:MIP31077.pep: gold
Sequenced Size:1982

Clone Sequence Records

MIP31077.complete Sequence

1982 bp assembled on 2011-06-08

GenBank Submission: BT128714.1

> MIP31077.complete
CAATGAATGTCCTCGTGATCCTGGTTCTATGCCTTATGGCAATCGCATGT
CTGGCGGACGTTTCCCATGTGAAACACCACAAGCACCAGCGGCATCATCA
CTCCAGGGATCACGAAGATGACGATGAGGAGTCCCATTACCTACCTCCCC
ACGAGGAAAAGGAGGTGGAGCAACCTTTTTACAAGAAGGAGAAGCACACC
AGTGAAAAGGTGGTTTACCACAAGGTAGAGGAGCACGAGGAGCCCAAATA
CTACAAGGAGCATCAACATGAAGAGCCCAAAAAGCAGCGAGTGGATCACT
ACCATCACTATGACAAGAAGCCAGAAGTAAAGACCCAGCACATTCACTAC
AAGCATAGCAAGCCCCATGTCCGTACGGATTACAATCAGGACTTGTTCAC
CCCAGCTGCTACCCAAGTGGTTTATCGCCGCCGTCGTCCTAGTCGAATTC
TATACGCCAGTGCCCCCAACTCGGTGTTCCACACCCACACGCAGATCAAC
GTGCAGTCCCAGGATTCGGAATTGAATTCCCTTACTCGCCCAGATCGTGC
AGCAGGAGCACAGGATCCTGCTGGGGCTCAAGCACCGACTGGAGCCCAGG
CACCAGGATTTCGACCCAACTGCCAGTTTGTTGGACCTGGAAACGTACCA
CCTGGCTGTGGACCCTCTGATCCCATAGGTGCTCAGCTACCAGCCAGTGC
TTTGGCTCCCACTGGTGCTAATCTTCCGGCCAATCAACCTGTTGCCGGCG
GACAATTGGCTGTTCTGGGTAACGGTCAGCGACCTCCACGTCCAGGTGGC
TATGGAGGTGGATATGGCAACCGACTCAACTTTTTTGTTGATCCTTCGCT
GGGCGCTCAGCTGGGAGCCATAGGTAATGCTGGAGCTGGAAATCAACAGG
CTGCCGGAGGAGGTCAGCTTGCGGGAGGAGCTCAACTTGGAGGGAGCCAA
GGATTCGACCCTTCCTTTGGTGCCCAAGCAGCTGCCGGAGGACCATTTAA
CACTGGTTTTGGAGCTGGTCAAAGACCTCAAAGACCTGCGCAAAACCAAT
ATGATCCCAACCTTCAGCTAGGTGGCCCTTTTGACCCCTCCGTGGGTGCT
CAATTGGGCGCAGGTCAGGGTGTTTCTAACCAAAGACCAAGTGGACAGGG
AGCATTTGATCCTTCTACAGGTGCTCAATTGGGCGCAGGTGAGGGTGTTT
CTAACCAAAGACCAAGTGGACAGGGAGCATTTGATCCTTCTACGGGTGCT
CAATTGGGTGCAGGTCAGGGCTTTAACCAGAGACCAAGTGCACAGGGAGC
ATTTGATCCTTCGACAGGTGCCCAACTTGGAGCTGGACAAGGCGTGCCTA
ACCAGCGACCCAATGCAGCTGGACCAGGAGCTTTTGATCCCAATCAGCGA
CAGTCCGACCCCTCCATTGGAGCCCAATTGGCAGCGGGACAAGTACCACG
CCTCAACAACCGACGACAGCGCAATCGATCCAACTACCAGGGTCTCAATG
TGCTGAATGGAAACGTTTTCGGACAACCCCATCTCCAGGGACCCACAAAT
GCGCTGGGAAATCAACAGGACACCAACATCATAGACGGCAACTTCTACAG
CGATCCTCATCATGGACACCAGCGGGCTTTGGTATCGGTTAATCCTAATC
AGCGTTCAGTCCTTATACCCGATGACGATGATGCGGACGATGATGGGCAG
CTAGGATTTCTGGGCTTTGCGGCTAGTAACAAGCAGTCCTCTTATGTGGT
TGCTCCCAAACAACTGCGATCTCATAGGCGCAGTTCAAAGCGAAACAATG
TGGATCTTAAAACATCTGCTTCGGAGTACGACACTGACTATCGTGAGGAT
GGCTATCACTACCAGAAGCCCAAACAGTCATTCGAGTTTTAAGTATTTTA
AAACAGAACATATTATAACATAAATTAAATCATACTTATCAGCATTTGCT
ACAAGAGCATACCAAAAAAAAAAAAAAAAAAA

MIP31077.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4472494..4474452 5..1963 9660 99.5 Plus
chr3L 24539361 chr3L 4473584..4473742 1170..1325 550 91.2 Plus
chr3L 24539361 chr3L 4473659..4473814 1095..1253 550 91.2 Plus
chr3L 24539361 chr3L 4473569..4473667 1230..1325 250 85.9 Plus
chr3L 24539361 chr3L 4473733..4473814 1094..1178 240 88.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:36:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4473137..4475102 5..1970 9815 99.9 Plus
3L 28110227 3L 4474227..4474385 1170..1325 550 91.2 Plus
3L 28110227 3L 4474302..4474457 1095..1253 550 91.2 Plus
3L 28110227 3L 4474226..4474310 1244..1325 240 88.2 Plus
3L 28110227 3L 4474376..4474457 1094..1178 240 88.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4473137..4475102 5..1970 9815 99.9 Plus
Blast to na_te.dros performed on 2019-03-15 10:36:50 has no hits.

MIP31077.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:37 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4472491..4474452 1..1963 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-08 17:12:38 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 1..1890 3..1892 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:21:57 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 1..1890 3..1892 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:08:36 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 1..1890 3..1892 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-08 17:12:37 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 8..1970 1..1963 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:21:57 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 8..1970 1..1963 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:36 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
CG11349-RB 8..1970 1..1963 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:37 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4473134..4475095 1..1963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:37 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4473134..4475095 1..1963 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:37 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4473134..4475095 1..1963 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:21:57 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4473134..4475095 1..1963 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:39 Download gff for MIP31077.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4473134..4475095 1..1963 99   Plus

MIP31077.pep Sequence

Translation from 2 to 1891

> MIP31077.pep
MNVLVILVLCLMAIACLADVSHVKHHKHQRHHHSRDHEDDDEESHYLPPH
EEKEVEQPFYKKEKHTSEKVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHY
HHYDKKPEVKTQHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRPSRIL
YASAPNSVFHTHTQINVQSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQA
PGFRPNCQFVGPGNVPPGCGPSDPIGAQLPASALAPTGANLPANQPVAGG
QLAVLGNGQRPPRPGGYGGGYGNRLNFFVDPSLGAQLGAIGNAGAGNQQA
AGGGQLAGGAQLGGSQGFDPSFGAQAAAGGPFNTGFGAGQRPQRPAQNQY
DPNLQLGGPFDPSVGAQLGAGQGVSNQRPSGQGAFDPSTGAQLGAGEGVS
NQRPSGQGAFDPSTGAQLGAGQGFNQRPSAQGAFDPSTGAQLGAGQGVPN
QRPNAAGPGAFDPNQRQSDPSIGAQLAAGQVPRLNNRRQRNRSNYQGLNV
LNGNVFGQPHLQGPTNALGNQQDTNIIDGNFYSDPHHGHQRALVSVNPNQ
RSVLIPDDDDADDDGQLGFLGFAASNKQSSYVVAPKQLRSHRRSSKRNNV
DLKTSASEYDTDYREDGYHYQKPKQSFEF*

MIP31077.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25077-PA 607 GF25077-PA 1..607 1..629 1543 63.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15233-PA 591 GG15233-PA 1..591 12..629 2195 83.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:53:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15684-PA 537 GH15684-PA 24..492 27..545 539 40.8 Plus
Dgri\GH23841-PA 150 GH23841-PA 66..115 495..545 187 68.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG11349-PB 629 CG11349-PB 1..629 1..629 3391 100 Plus
prc-PB 1713 CG5700-PB 214..499 185..480 264 36.7 Plus
prc-PB 1713 CG5700-PB 333..641 185..480 262 34.3 Plus
prc-PB 1713 CG5700-PB 452..839 185..503 256 30.5 Plus
prc-PB 1713 CG5700-PB 123..414 204..480 236 34 Plus
prc-PB 1713 CG5700-PB 873..1192 185..521 213 31.3 Plus
CG10555-PB 926 CG10555-PB 499..816 180..482 179 27.2 Plus
CG10555-PA 926 CG10555-PA 499..816 180..482 179 27.2 Plus
Cpr47Ef-PD 601 CG13214-PD 203..430 213..460 169 29.7 Plus
Cpr47Ef-PC 612 CG13214-PC 203..430 213..460 169 29.7 Plus
resilin-PB 575 CG15920-PB 265..567 179..469 160 28.3 Plus
HnRNP-K-PD 315 CG13425-PD 38..270 247..493 159 31.7 Plus
HnRNP-K-PB 413 CG13425-PB 133..365 247..493 159 31.7 Plus
HnRNP-K-PE 493 CG13425-PE 216..448 247..493 159 31.7 Plus
HnRNP-K-PF 496 CG13425-PF 216..448 247..493 159 31.7 Plus
HnRNP-K-PA 496 CG13425-PA 216..448 247..493 159 31.7 Plus
HnRNP-K-PC 502 CG13425-PC 222..454 247..493 159 31.7 Plus
resilin-PA 620 CG15920-PA 29..366 189..512 159 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12732-PA 842 GI12732-PA 18..507 18..486 523 37.6 Plus
Dmoj\GI12732-PA 842 GI12732-PA 435..840 191..625 277 39.4 Plus
Dmoj\GI21868-PA 409 GI21868-PA 7..407 191..625 247 39.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:53:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17900-PA 599 GL17900-PA 1..599 1..629 1539 60.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10938-PA 599 GA10938-PA 1..599 1..629 1559 60.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14666-PA 617 GM14666-PA 1..617 12..629 2580 92.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13849-PA 616 GD13849-PA 1..616 12..629 2506 92.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15505-PA 606 GJ15505-PA 13..605 13..626 906 45.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21454-PA 624 GE21454-PA 1..624 12..629 2349 89.2 Plus

MIP31077.hyp Sequence

Translation from 35 to 1891

> MIP31077.hyp
MAIACLADVSHVKHHKHQRHHHSRDHEDDDEESHYLPPHEEKEVEQPFYK
KEKHTSEKVVYHKVEEHEEPKYYKEHQHEEPKKQRVDHYHHYDKKPEVKT
QHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRPSRILYASAPNSVFHT
HTQINVQSQDSELNSLTRPDRAAGAQDPAGAQAPTGAQAPGFRPNCQFVG
PGNVPPGCGPSDPIGAQLPASALAPTGANLPANQPVAGGQLAVLGNGQRP
PRPGGYGGGYGNRLNFFVDPSLGAQLGAIGNAGAGNQQAAGGGQLAGGAQ
LGGSQGFDPSFGAQAAAGGPFNTGFGAGQRPQRPAQNQYDPNLQLGGPFD
PSVGAQLGAGQGVSNQRPSGQGAFDPSTGAQLGAGEGVSNQRPSGQGAFD
PSTGAQLGAGQGFNQRPSAQGAFDPSTGAQLGAGQGVPNQRPNAAGPGAF
DPNQRQSDPSIGAQLAAGQVPRLNNRRQRNRSNYQGLNVLNGNVFGQPHL
QGPTNALGNQQDTNIIDGNFYSDPHHGHQRALVSVNPNQRSVLIPDDDDA
DDDGQLGFLGFAASNKQSSYVVAPKQLRSHRRSSKRNNVDLKTSASEYDT
DYREDGYHYQKPKQSFEF*

MIP31077.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG11349-PB 629 CG11349-PB 12..629 1..618 3339 100 Plus
prc-PB 1713 CG5700-PB 214..499 174..469 264 36.7 Plus
prc-PB 1713 CG5700-PB 333..641 174..469 262 34.3 Plus
prc-PB 1713 CG5700-PB 452..839 174..492 256 30.5 Plus
prc-PB 1713 CG5700-PB 123..414 193..469 236 34 Plus
prc-PB 1713 CG5700-PB 873..1192 174..510 213 31.3 Plus
CG10555-PB 926 CG10555-PB 499..816 169..471 179 27.2 Plus
CG10555-PA 926 CG10555-PA 499..816 169..471 179 27.2 Plus
Cpr47Ef-PD 601 CG13214-PD 203..430 202..449 169 29.7 Plus