Clone MIP31269 Report

Search the DGRC for MIP31269

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:312
Well:69
Vector:pOT2
Associated Gene/TranscriptCG42766-RB
Protein status:MIP31269.pep: gold
Sequenced Size:746

Clone Sequence Records

MIP31269.complete Sequence

746 bp assembled on 2011-06-09

GenBank Submission: BT128722.1

> MIP31269.complete
TTTCATTCGGTACCTTTCAGTCAGTACGGAACAAATATTCATACAATCTT
TTCGAGATCTTTTATAAGTTTTGTAAATTCATTTGTACTAACTTACATCA
TTTCGCCATGCCTTCCGTCGAGTGGGTCTGTGGTTTGCTCTACTACGTTA
TGCGCACCTACATAAAGGTATTCGTATCCAGTTGCGAAGCACACTTCCCT
ATCGATATCCTTGACAAGATTGTGTATTTGATAGATTTCGCCGAAGTTTC
CATGAAGATAATGCGCCGGCCAAGAAATTACACGAATCCGACTGAGCGCC
AAGCGAGACGCCTTCAATTCTACAATTTCCTTTTAAAGTTAAGATTTTTG
GCACAGGTGATCTACACCTTGGTAGCCGTGGTAATTGGGACACTTAAAAC
ATAAAAATTTATTTAATATGTTCCAAAAAATTCTATACATACTCATTGAA
ATATTTTTTTTTTTTTTTTTTTTTGACCATTCTAAGCTTTCTGTAATCCA
TGTAAAATAGCGTACAAAACGGGACAGGGCTGCGACCCGCGCTGATTGTT
TGGACTGCGATGTGCTGTATTACTTGGCTGCCGTGGCTCCTTGAGGGACT
GATCAACTATTTGTTTAAATGATGGACGCCATGGCGTTAGACATATATTT
TTCAAAATTTTCCCTAACATGTAGCTATTCCTGAAATGTACCAAATAAAG
CACTGTTCTGCTTCGTACATTCTCAAAAAAAAAAAAAAAAAAAAAA

MIP31269.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:37:02
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 15866994..15867500 217..724 2460 99.4 Plus
chrX 22417052 chrX 15866717..15866934 1..218 1090 100 Plus
chrX 22417052 chrX 15113503..15113681 213..35 370 80.4 Minus
chrX 22417052 chrX 15113192..15113411 461..243 255 77.5 Minus
chrX 22417052 chrX 15112958..15113064 635..529 250 82.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15977153..15977662 217..726 2535 99.8 Plus
X 23542271 X 15976876..15977093 1..218 1090 100 Plus
X 23542271 X 15223378..15223556 213..35 370 80.4 Minus
X 23542271 X 15223067..15223286 461..243 255 77.5 Minus
X 23542271 X 15222833..15222939 635..529 250 82.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 15985251..15985760 217..726 2535 99.8 Plus
X 23527363 X 15984974..15985191 1..218 1090 100 Plus
X 23527363 X 15231476..15231654 213..35 370 80.4 Minus
X 23527363 X 15230931..15231037 635..529 250 82.2 Minus
X 23527363 X 15231241..15231329 386..298 160 78.6 Minus
Blast to na_te.dros performed on 2019-03-15 10:37:01 has no hits.

MIP31269.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:43 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 15866717..15866934 1..218 100 -> Plus
chrX 15866996..15867500 219..724 95   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-09 11:53:41 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 1..297 108..404 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:13 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 1..297 108..404 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:08:50 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 1..297 108..404 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-09 11:53:41 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 9..412 1..404 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:13 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 9..732 1..724 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:50 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
CG42766-RB 9..732 1..724 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
X 15976876..15977093 1..218 100 -> Plus
X 15977155..15977660 219..724 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
X 15976876..15977093 1..218 100 -> Plus
X 15977155..15977660 219..724 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
X 15976876..15977093 1..218 100 -> Plus
X 15977155..15977660 219..724 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:13 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15870909..15871126 1..218 100 -> Plus
arm_X 15871188..15871693 219..724 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:45 Download gff for MIP31269.complete
Subject Subject Range Query Range Percent Splice Strand
X 15984974..15985191 1..218 100 -> Plus
X 15985253..15985758 219..724 99   Plus

MIP31269.pep Sequence

Translation from 2 to 403

> MIP31269.pep
SFGTFQSVRNKYSYNLFEIFYKFCKFICTNLHHFAMPSVEWVCGLLYYVM
RTYIKVFVSSCEAHFPIDILDKIVYLIDFAEVSMKIMRRPRNYTNPTERQ
ARRLQFYNFLLKLRFLAQVIYTLVAVVIGTLKT*

MIP31269.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG42766-PB 98 CG42766-PB 1..98 36..133 504 100 Plus
CG42766-PA 98 CG42766-PA 1..92 36..127 472 98.9 Plus
CG43076-PA 160 CG43076-PA 1..92 36..127 223 50 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17259-PA 84 GD17259-PA 1..84 50..133 262 65.5 Plus

MIP31269.hyp Sequence

Translation from 2 to 403

> MIP31269.hyp
SFGTFQSVRNKYSYNLFEIFYKFCKFICTNLHHFAMPSVEWVCGLLYYVM
RTYIKVFVSSCEAHFPIDILDKIVYLIDFAEVSMKIMRRPRNYTNPTERQ
ARRLQFYNFLLKLRFLAQVIYTLVAVVIGTLKT*

MIP31269.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG42766-PB 98 CG42766-PB 1..98 36..133 504 100 Plus
CG42766-PA 98 CG42766-PA 1..92 36..127 472 98.9 Plus
CG43076-PA 160 CG43076-PA 1..92 36..127 223 50 Plus