MIP31269.complete Sequence
746 bp assembled on 2011-06-09
GenBank Submission: BT128722.1
> MIP31269.complete
TTTCATTCGGTACCTTTCAGTCAGTACGGAACAAATATTCATACAATCTT
TTCGAGATCTTTTATAAGTTTTGTAAATTCATTTGTACTAACTTACATCA
TTTCGCCATGCCTTCCGTCGAGTGGGTCTGTGGTTTGCTCTACTACGTTA
TGCGCACCTACATAAAGGTATTCGTATCCAGTTGCGAAGCACACTTCCCT
ATCGATATCCTTGACAAGATTGTGTATTTGATAGATTTCGCCGAAGTTTC
CATGAAGATAATGCGCCGGCCAAGAAATTACACGAATCCGACTGAGCGCC
AAGCGAGACGCCTTCAATTCTACAATTTCCTTTTAAAGTTAAGATTTTTG
GCACAGGTGATCTACACCTTGGTAGCCGTGGTAATTGGGACACTTAAAAC
ATAAAAATTTATTTAATATGTTCCAAAAAATTCTATACATACTCATTGAA
ATATTTTTTTTTTTTTTTTTTTTTGACCATTCTAAGCTTTCTGTAATCCA
TGTAAAATAGCGTACAAAACGGGACAGGGCTGCGACCCGCGCTGATTGTT
TGGACTGCGATGTGCTGTATTACTTGGCTGCCGTGGCTCCTTGAGGGACT
GATCAACTATTTGTTTAAATGATGGACGCCATGGCGTTAGACATATATTT
TTCAAAATTTTCCCTAACATGTAGCTATTCCTGAAATGTACCAAATAAAG
CACTGTTCTGCTTCGTACATTCTCAAAAAAAAAAAAAAAAAAAAAA
MIP31269.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15866994..15867500 | 217..724 | 2460 | 99.4 | Plus |
chrX | 22417052 | chrX | 15866717..15866934 | 1..218 | 1090 | 100 | Plus |
chrX | 22417052 | chrX | 15113503..15113681 | 213..35 | 370 | 80.4 | Minus |
chrX | 22417052 | chrX | 15113192..15113411 | 461..243 | 255 | 77.5 | Minus |
chrX | 22417052 | chrX | 15112958..15113064 | 635..529 | 250 | 82.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15977153..15977662 | 217..726 | 2535 | 99.8 | Plus |
X | 23542271 | X | 15976876..15977093 | 1..218 | 1090 | 100 | Plus |
X | 23542271 | X | 15223378..15223556 | 213..35 | 370 | 80.4 | Minus |
X | 23542271 | X | 15223067..15223286 | 461..243 | 255 | 77.5 | Minus |
X | 23542271 | X | 15222833..15222939 | 635..529 | 250 | 82.2 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15985251..15985760 | 217..726 | 2535 | 99.8 | Plus |
X | 23527363 | X | 15984974..15985191 | 1..218 | 1090 | 100 | Plus |
X | 23527363 | X | 15231476..15231654 | 213..35 | 370 | 80.4 | Minus |
X | 23527363 | X | 15230931..15231037 | 635..529 | 250 | 82.2 | Minus |
X | 23527363 | X | 15231241..15231329 | 386..298 | 160 | 78.6 | Minus |
Blast to na_te.dros performed on 2019-03-15 10:37:01 has no hits.
MIP31269.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:43 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15866717..15866934 | 1..218 | 100 | -> | Plus |
chrX | 15866996..15867500 | 219..724 | 95 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-09 11:53:41 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 1..297 | 108..404 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:13 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 1..297 | 108..404 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:08:50 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 1..297 | 108..404 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-09 11:53:41 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 9..412 | 1..404 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:13 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 9..732 | 1..724 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:50 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42766-RB | 9..732 | 1..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15976876..15977093 | 1..218 | 100 | -> | Plus |
X | 15977155..15977660 | 219..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15976876..15977093 | 1..218 | 100 | -> | Plus |
X | 15977155..15977660 | 219..724 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:43 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15976876..15977093 | 1..218 | 100 | -> | Plus |
X | 15977155..15977660 | 219..724 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:13 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15870909..15871126 | 1..218 | 100 | -> | Plus |
arm_X | 15871188..15871693 | 219..724 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:45 Download gff for
MIP31269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15984974..15985191 | 1..218 | 100 | -> | Plus |
X | 15985253..15985758 | 219..724 | 99 | | Plus |
MIP31269.pep Sequence
Translation from 2 to 403
> MIP31269.pep
SFGTFQSVRNKYSYNLFEIFYKFCKFICTNLHHFAMPSVEWVCGLLYYVM
RTYIKVFVSSCEAHFPIDILDKIVYLIDFAEVSMKIMRRPRNYTNPTERQ
ARRLQFYNFLLKLRFLAQVIYTLVAVVIGTLKT*
MIP31269.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42766-PB | 98 | CG42766-PB | 1..98 | 36..133 | 504 | 100 | Plus |
CG42766-PA | 98 | CG42766-PA | 1..92 | 36..127 | 472 | 98.9 | Plus |
CG43076-PA | 160 | CG43076-PA | 1..92 | 36..127 | 223 | 50 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:54:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17259-PA | 84 | GD17259-PA | 1..84 | 50..133 | 262 | 65.5 | Plus |
MIP31269.hyp Sequence
Translation from 2 to 403
> MIP31269.hyp
SFGTFQSVRNKYSYNLFEIFYKFCKFICTNLHHFAMPSVEWVCGLLYYVM
RTYIKVFVSSCEAHFPIDILDKIVYLIDFAEVSMKIMRRPRNYTNPTERQ
ARRLQFYNFLLKLRFLAQVIYTLVAVVIGTLKT*
MIP31269.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:58:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42766-PB | 98 | CG42766-PB | 1..98 | 36..133 | 504 | 100 | Plus |
CG42766-PA | 98 | CG42766-PA | 1..92 | 36..127 | 472 | 98.9 | Plus |
CG43076-PA | 160 | CG43076-PA | 1..92 | 36..127 | 223 | 50 | Plus |