MIP31273.complete Sequence
420 bp assembled on 2011-06-08
GenBank Submission: BT128708.1
> MIP31273.complete
AATAAGCTCATCAAAATTAAATAGGAAACTGGCAAGTAAACCCTTCCTAA
ATGAAGGACTACCTGCCAGAAAGTCTATCGGTTGTCTTTTTCTTGGCATA
ATACTTGGAGTTTTTTTAGCCGGAATACTCTTTTACTCGCTGATGAACGA
AGACTGCCGGAAAAGTTCGAGGAATATAATGAGCATTATTGGAGTGGAAA
TACCTCAAAACAAAAACGCCACATCGAAATTGGATACTGCCGCAAAAAAT
GTAGAAGAGAGTAGCGTAGCGGTTACACAAGAAACCCCTGCTGAATTTAA
TAAAGCTGATAATAATTCAACAGTTTCAATGCCCTAAGATATTAATTAAG
TAATGATATATGAAATAAATATTCTATGATAAAATGATATGATAAAATAT
TGTAAAAAAAAAAAAAAAAA
MIP31273.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:05:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 15640945..15641294 | 54..403 | 1735 | 99.7 | Plus |
chr3L | 24539361 | chr3L | 15640801..15640857 | 1..57 | 285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651043..15651398 | 54..409 | 1780 | 100 | Plus |
3L | 28110227 | 3L | 15650899..15650955 | 1..57 | 285 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 15644143..15644498 | 54..409 | 1780 | 100 | Plus |
3L | 28103327 | 3L | 15643999..15644055 | 1..57 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-17 01:05:19 has no hits.
MIP31273.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:06:06 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 15640801..15640856 | 1..56 | 100 | -> | Plus |
chr3L | 15640948..15641294 | 57..403 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-08 13:45:20 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 9..345 | 1..337 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:22:19 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 9..345 | 1..337 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:43:36 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 9..345 | 1..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-08 13:45:19 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 9..345 | 1..337 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:22:19 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 48..450 | 1..403 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:43:36 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 48..450 | 1..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15650899..15650954 | 1..56 | 100 | -> | Plus |
3L | 15651046..15651392 | 57..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15650899..15650954 | 1..56 | 100 | -> | Plus |
3L | 15651046..15651392 | 57..403 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15650899..15650954 | 1..56 | 100 | -> | Plus |
3L | 15651046..15651392 | 57..403 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:22:19 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15643999..15644054 | 1..56 | 100 | -> | Plus |
arm_3L | 15644146..15644492 | 57..403 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:28 Download gff for
MIP31273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15644146..15644492 | 57..403 | 100 | | Plus |
3L | 15643999..15644054 | 1..56 | 100 | -> | Plus |
MIP31273.hyp Sequence
Translation from 0 to 336
> MIP31273.hyp
ISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSLMNE
DCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPAEFN
KADNNSTVSMP*
MIP31273.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-PA | 114 | CG43084-PA | 4..114 | 1..111 | 550 | 100 | Plus |
MIP31273.pep Sequence
Translation from 1 to 336
> MIP31273.pep
ISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSLMNE
DCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPAEFN
KADNNSTVSMP*
MIP31273.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-PA | 114 | CG43084-PA | 4..114 | 1..111 | 550 | 100 | Plus |