Clone MIP31273 Report

Search the DGRC for MIP31273

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:312
Well:73
Vector:pOT2
Protein status:MIP31273.pep: Imported from assembly
Sequenced Size:420

Clone Sequence Records

MIP31273.complete Sequence

420 bp assembled on 2011-06-08

GenBank Submission: BT128708.1

> MIP31273.complete
AATAAGCTCATCAAAATTAAATAGGAAACTGGCAAGTAAACCCTTCCTAA
ATGAAGGACTACCTGCCAGAAAGTCTATCGGTTGTCTTTTTCTTGGCATA
ATACTTGGAGTTTTTTTAGCCGGAATACTCTTTTACTCGCTGATGAACGA
AGACTGCCGGAAAAGTTCGAGGAATATAATGAGCATTATTGGAGTGGAAA
TACCTCAAAACAAAAACGCCACATCGAAATTGGATACTGCCGCAAAAAAT
GTAGAAGAGAGTAGCGTAGCGGTTACACAAGAAACCCCTGCTGAATTTAA
TAAAGCTGATAATAATTCAACAGTTTCAATGCCCTAAGATATTAATTAAG
TAATGATATATGAAATAAATATTCTATGATAAAATGATATGATAAAATAT
TGTAAAAAAAAAAAAAAAAA

MIP31273.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 15640945..15641294 54..403 1735 99.7 Plus
chr3L 24539361 chr3L 15640801..15640857 1..57 285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15651043..15651398 54..409 1780 100 Plus
3L 28110227 3L 15650899..15650955 1..57 285 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 15644143..15644498 54..409 1780 100 Plus
3L 28103327 3L 15643999..15644055 1..57 285 100 Plus
Blast to na_te.dros performed on 2019-03-17 01:05:19 has no hits.

MIP31273.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:06:06 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 15640801..15640856 1..56 100 -> Plus
chr3L 15640948..15641294 57..403 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-08 13:45:20 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 9..345 1..337 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:22:19 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 9..345 1..337 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:43:36 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 9..345 1..337 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-08 13:45:19 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 9..345 1..337 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:22:19 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 48..450 1..403 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:43:36 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
CG43084-RA 48..450 1..403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15650899..15650954 1..56 100 -> Plus
3L 15651046..15651392 57..403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15650899..15650954 1..56 100 -> Plus
3L 15651046..15651392 57..403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:06 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15650899..15650954 1..56 100 -> Plus
3L 15651046..15651392 57..403 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:22:19 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15643999..15644054 1..56 100 -> Plus
arm_3L 15644146..15644492 57..403 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:28 Download gff for MIP31273.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15644146..15644492 57..403 100   Plus
3L 15643999..15644054 1..56 100 -> Plus

MIP31273.hyp Sequence

Translation from 0 to 336

> MIP31273.hyp
ISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSLMNE
DCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPAEFN
KADNNSTVSMP*

MIP31273.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-PA 114 CG43084-PA 4..114 1..111 550 100 Plus

MIP31273.pep Sequence

Translation from 1 to 336

> MIP31273.pep
ISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSLMNE
DCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPAEFN
KADNNSTVSMP*

MIP31273.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG43084-PA 114 CG43084-PA 4..114 1..111 550 100 Plus