Clone MIP31407 Report

Search the DGRC for MIP31407

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:314
Well:7
Vector:pOT2
Associated Gene/TranscriptCG14417-RA
Protein status:MIP31407.pep: gold
Sequenced Size:1124

Clone Sequence Records

MIP31407.complete Sequence

1124 bp assembled on 2011-07-20

GenBank Submission: BT128772.1

> MIP31407.complete
CCAAAGCAAAATGCAGCCACCACCGAAGACATACAACTGGTTGCTCCTCT
TGCTTGTCCTTTTGGGCATTAGCCTGGCCAGGACAGCGCCGCGTCAGGCG
ACAAGTACCTACGTCATTCCGATGTCTTGGAACGATCTGATTGGGACGTT
CAATTTCCCAGAGCCGCAGGAAAAATCCCATGAAATTCCCGAGCCGCGTG
CGTTCTCTGTGAGTCTGGATGATATGAGTCCCGATGGACAGCAGGCGGAT
GATCTGCAGCAGGTGCTCATGCTGACCAGTGGACTGACTCCCGCCCAGAT
TGCCCAGCGCAGTCAGGGCCGGAACAATGAGGGTAGATTCTTTGGACGCG
GCGGTACCACCGTGGTGGTGATCACCGGTGGTGGCGCTGCCAACAACACT
AACAACAACAGTTTTGTGAGCACTCCTGCAAGCACAACCACAACGGGCAC
TCGAACCTCGGAGTTTATCCGTACACCAATTGCATACCCGGCCGGATTGC
CCATGCAGTACTTCCGAAAGCGGCAGGATGACGGAACATCGATGTCATAT
CCGGAATTCCTCCGCTGGAACGAGGCAGCTTTCTATGGCGGAGATTTGGG
TTTGAGCGGCTCCAATGGGGCCTATGGTCTGTCGGGCGTCCCTTTGGTAC
CCATCACCGTTGGCAACGAGGTGAGGTATGTGCCAATGAATCTTCGCATG
TTCCGGCAGCTTGTCGGTGATCCCACTACGGTTGCTTCCCCACCACCGCC
GTCCATCAGGGAGCAGGATGATCAGCTGGAGGACGACGACATATCCGCCT
TGTCCTTGGGCCCCGAACTGGAAGTACTCGACGAGAGCCCCAATGAAGGA
GGCCAAGAGGTCGCAGGTTCTGGTCACTCGGTCGCCGATTCACCAGGCTT
TGGAATCCTTGGCCAGCGGCTGAGACAACGACCATTGGTCAGGAGGCGAC
CACTGCAGACACTGGCCCAGAATATTCGCCGGGTGCAGTACGTCAGAAAG
TAATGGGCGGACCAAGATACCAAGATGCAACCATAATGACCATAATGACC
ATTAGATTTAAACAAATTTTTTTTTTACGAACCCGAAATAAAATGAAATG
ATAAAGAAAAAAAAAAAAAAAAAA

MIP31407.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2769228..2770332 1106..1 5345 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2875426..2876533 1108..1 5540 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2883524..2884631 1108..1 5540 100 Minus
Blast to na_te.dros performed on 2019-03-15 10:46:46 has no hits.

MIP31407.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:47:56 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2769228..2770332 1..1106 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-07-20 12:09:13 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..993 11..1003 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:25:02 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..993 11..1003 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:11:45 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..993 11..1003 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-20 12:09:13 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..993 11..1003 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:25:02 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..1106 1..1106 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:45 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
CG14417-RA 1..1106 1..1106 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:47:56 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
X 2875428..2876533 1..1106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:47:56 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
X 2875428..2876533 1..1106 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:47:56 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
X 2875428..2876533 1..1106 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:25:02 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2769461..2770566 1..1106 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:09:08 Download gff for MIP31407.complete
Subject Subject Range Query Range Percent Splice Strand
X 2883526..2884631 1..1106 100   Minus

MIP31407.hyp Sequence

Translation from 0 to 1002

> MIP31407.hyp
QSKMQPPPKTYNWLLLLLVLLGISLARTAPRQATSTYVIPMSWNDLIGTF
NFPEPQEKSHEIPEPRAFSVSLDDMSPDGQQADDLQQVLMLTSGLTPAQI
AQRSQGRNNEGRFFGRGGTTVVVITGGGAANNTNNNSFVSTPASTTTTGT
RTSEFIRTPIAYPAGLPMQYFRKRQDDGTSMSYPEFLRWNEAAFYGGDLG
LSGSNGAYGLSGVPLVPITVGNEVRYVPMNLRMFRQLVGDPTTVASPPPP
SIREQDDQLEDDDISALSLGPELEVLDESPNEGGQEVAGSGHSVADSPGF
GILGQRLRQRPLVRRRPLQTLAQNIRRVQYVRK*

MIP31407.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14417-PA 330 CG14417-PA 1..330 4..333 1715 100 Plus

MIP31407.pep Sequence

Translation from 1 to 1002

> MIP31407.pep
QSKMQPPPKTYNWLLLLLVLLGISLARTAPRQATSTYVIPMSWNDLIGTF
NFPEPQEKSHEIPEPRAFSVSLDDMSPDGQQADDLQQVLMLTSGLTPAQI
AQRSQGRNNEGRFFGRGGTTVVVITGGGAANNTNNNSFVSTPASTTTTGT
RTSEFIRTPIAYPAGLPMQYFRKRQDDGTSMSYPEFLRWNEAAFYGGDLG
LSGSNGAYGLSGVPLVPITVGNEVRYVPMNLRMFRQLVGDPTTVASPPPP
SIREQDDQLEDDDISALSLGPELEVLDESPNEGGQEVAGSGHSVADSPGF
GILGQRLRQRPLVRRRPLQTLAQNIRRVQYVRK*

MIP31407.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22475-PA 279 GF22475-PA 11..233 15..265 260 36.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18602-PA 336 GG18602-PA 1..336 4..333 983 70.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14417-PA 330 CG14417-PA 1..330 4..333 1715 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10964-PA 382 GI10964-PA 101..382 51..331 208 31 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19791-PA 357 GL19791-PA 7..357 15..331 389 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12967-PA 361 GA12967-PA 7..361 15..331 354 40.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18849-PA 332 GM18849-PA 1..332 4..333 1320 92.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16350-PA 331 GD16350-PA 1..331 4..333 1303 93.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15281-PA 429 GJ15281-PA 233..429 163..331 202 35.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25524-PA 316 GK25524-PA 148..316 165..331 179 36.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16915-PA 338 GE16915-PA 1..338 4..333 1009 76.6 Plus