Clone MIP31483 Report

Search the DGRC for MIP31483

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:314
Well:83
Vector:pOT2
Associated Gene/TranscriptCG7798-RA
Protein status:MIP31483.pep: gold
Sequenced Size:780

Clone Sequence Records

MIP31483.complete Sequence

780 bp assembled on 2011-06-08

GenBank Submission: BT128711.1

> MIP31483.complete
TTCTCAGAGCAATAGCCTTTCCGAAATAGCTCCAACAAAATAAAAGAATT
GGAGATGGTTATGACTTCCAATCTTTGTCGCCTAGTGTTGATAATTTATG
CTCGAGTGTGGGCCACACTTCAGAGCTGTCCAAATGAGTGCTTGTAAAAA
TTAGATTGGGCCAAGTTGTGCTCCGAATCTCGCAGCAAACTGGATGGCTA
TATAAGCCACGAGTTACCATTAGAAGCCTGCATTGTTTCTGGAAGATGTG
GCCCATTTGGCTGCTGGTGCTCTTAACGCTATCACTGGCCACTGGCCGCC
AGGTGGGCAGATGCAGTTTGGCCCGGCAGCTGTATCGATACGGAATGGCT
TACAACGAGCTACCCGATTGGCTGTGCCTCGTGGAGGGCGAGAGCTCGTT
CAACACAAAAGCCATCAATCCCTCGAACGTTGATGGATCCGTGGACTGGG
GTCTCTTCCAGATCAACGATCGTTACTGGTGCAAGCCGGCGGATGGTCGT
CCATCCAACGATCTGTGTCGCTTGCCCTGCCGCCTGCTGTTGAGCGACGA
TATCCGGTATTCCATTGCCTGTGCGAAGTACATCAGGAAACAGCAAGGAT
TCTCCGCCTGGGTGGCTTGGAACAATCGATGTCAGGGTGTCAAGCCCAAT
GTGAATCACTGCTTCCGGCGGCGACACAGAAATTCGGGTTGAGCATCGGT
AAAAAGCTAAAAAAAATACGAAACTTAAGAACCTAAATGCAGAATAAAAT
ATTATAATATTAAAAAAAAAAAAAAAAAAA

MIP31483.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12109434..12110194 761..1 3805 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16222109..16222872 764..1 3820 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16223308..16224071 764..1 3820 100 Minus
Blast to na_te.dros performed on 2019-03-17 01:05:24 has no hits.

MIP31483.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:06:09 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12109453..12110194 1..742 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-08 13:45:20 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..447 246..692 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:22:27 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..447 246..692 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:43:42 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..447 246..692 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-08 13:45:20 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..447 246..692 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:22:27 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..516 246..761 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:43:42 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
CG7798-RA 1..516 246..761 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:09 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16222112..16222872 1..761 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:09 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16222112..16222872 1..761 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:06:09 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16222112..16222872 1..761 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:22:27 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12109617..12110377 1..761 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:29 Download gff for MIP31483.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16223311..16224071 1..761 100   Minus

MIP31483.pep Sequence

Translation from 245 to 691

> MIP31483.pep
MWPIWLLVLLTLSLATGRQVGRCSLARQLYRYGMAYNELPDWLCLVEGES
SFNTKAINPSNVDGSVDWGLFQINDRYWCKPADGRPSNDLCRLPCRLLLS
DDIRYSIACAKYIRKQQGFSAWVAWNNRCQGVKPNVNHCFRRRHRNSG*

MIP31483.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12660-PA 147 GF12660-PA 1..147 1..148 666 87.2 Plus
Dana\GF10070-PA 141 GF10070-PA 4..141 6..140 329 43.9 Plus
Dana\GF10076-PA 142 GF10076-PA 4..142 6..141 322 45.7 Plus
Dana\GF10072-PA 140 GF10072-PA 18..140 17..140 311 46.8 Plus
Dana\GF24436-PA 140 GF24436-PA 18..140 17..140 301 46 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22291-PA 148 GG22291-PA 1..148 1..148 653 95.9 Plus
Dere\GG14615-PA 141 GG14615-PA 4..141 6..140 336 45.3 Plus
Dere\GG14620-PA 142 GG14620-PA 4..142 6..141 305 41.4 Plus
Dere\GG14617-PA 140 GG14617-PA 19..140 18..140 304 46.3 Plus
Dere\GG19822-PA 140 GG19822-PA 19..140 18..140 304 46.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21060-PA 151 GH21060-PA 20..151 17..148 632 87.1 Plus
Dgri\GH15486-PA 140 GH15486-PA 18..140 17..140 323 47.6 Plus
Dgri\GH15485-PA 140 GH15485-PA 18..140 17..140 323 47.6 Plus
Dgri\GH15987-PA 140 GH15987-PA 18..140 17..140 320 47.6 Plus
Dgri\GH15989-PA 140 GH15989-PA 18..140 17..140 320 47.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7798-PA 148 CG7798-PA 1..148 1..148 828 100 Plus
LysP-PA 141 CG9116-PA 12..141 10..140 349 47.3 Plus
LysB-PB 140 CG1179-PB 5..140 7..140 337 46 Plus
LysB-PA 140 CG1179-PA 5..140 7..140 337 46 Plus
LysD-PA 140 CG9118-PA 5..140 4..140 334 45.3 Plus
LysX-PA 142 CG9120-PA 4..141 6..140 334 44.6 Plus
LysE-PA 140 CG1180-PA 5..140 7..140 329 44.5 Plus
LysS-PA 140 CG1165-PA 1..140 1..140 321 44.4 Plus
CG30062-PB 171 CG30062-PB 32..152 23..141 290 46.7 Plus
CG8492-PD 1360 CG8492-PD 437..567 16..140 254 39.8 Plus
CG8492-PD 1360 CG8492-PD 585..724 7..140 244 37.3 Plus
CG11159-PA 146 CG11159-PA 17..146 7..139 215 37 Plus
CG8492-PD 1360 CG8492-PD 184..301 17..129 206 34.2 Plus
CG16756-PA 152 CG16756-PA 18..146 6..136 203 35.1 Plus
CG16799-PB 179 CG16799-PB 22..150 1..130 192 33.1 Plus
CG16799-PA 179 CG16799-PA 22..150 1..130 192 33.1 Plus
CG8492-PD 1360 CG8492-PD 4..134 2..130 177 33.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18662-PA 155 GI18662-PA 4..155 1..148 551 78.9 Plus
Dmoj\GI16641-PA 144 GI16641-PA 6..144 4..141 328 45 Plus
Dmoj\GI16637-PA 140 GI16637-PA 18..140 17..140 325 48.4 Plus
Dmoj\GI16638-PA 140 GI16638-PA 18..140 17..140 325 48.4 Plus
Dmoj\GI16642-PA 140 GI16642-PA 18..140 17..140 322 47.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16804-PA 163 GL16804-PA 4..114 1..111 438 86.5 Plus
Dper\GL16156-PA 140 GL16156-PA 18..140 17..140 308 47.6 Plus
Dper\GL16691-PA 140 GL16691-PA 18..140 17..140 308 47.6 Plus
Dper\GL16159-PA 140 GL16159-PA 18..140 17..140 308 46 Plus
Dper\GL16083-PA 140 GL16083-PA 18..140 17..140 308 46 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20595-PA 151 GA20595-PA 4..151 1..148 626 87.2 Plus
Dpse\GA28405-PA 140 GA28405-PA 5..140 4..140 320 44.5 Plus
Dpse\GA28483-PA 140 GA28483-PA 18..140 17..140 311 46.8 Plus
Dpse\GA28408-PA 140 GA28408-PA 18..140 17..140 311 46.8 Plus
Dpse\GA28485-PA 140 GA28485-PA 18..140 17..140 309 46 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20080-PA 148 GM20080-PA 1..148 1..148 773 98.6 Plus
Dsec\GM14382-PA 140 GM14382-PA 18..140 17..140 310 46.8 Plus
Dsec\GM14380-PA 140 GM14380-PA 19..140 18..140 305 46.3 Plus
Dsec\GM14229-PA 140 GM14229-PA 19..140 18..140 305 46.3 Plus
Dsec\GM14378-PA 140 GM14378-PA 19..140 18..140 303 45.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25558-PA 148 GD25558-PA 1..148 1..148 780 99.3 Plus
Dsim\GD13493-PA 160 GD13493-PA 4..141 6..140 325 44.6 Plus
Dsim\GD13594-PA 140 GD13594-PA 18..140 17..140 310 46.8 Plus
Dsim\GD17618-PA 140 GD17618-PA 1..140 1..140 309 45.1 Plus
Dsim\GD17617-PA 140 GD17617-PA 1..140 1..140 309 45.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21678-PA 152 GJ21678-PA 8..152 4..148 593 82.1 Plus
Dvir\GJ12508-PA 140 GJ12508-PA 4..140 6..140 334 45.7 Plus
Dvir\GJ12507-PA 140 GJ12507-PA 4..140 6..140 334 45.7 Plus
Dvir\GJ12895-PA 140 GJ12895-PA 4..140 6..140 334 45.7 Plus
Dvir\GJ12893-PA 140 GJ12893-PA 4..140 6..140 333 45.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21106-PA 141 GK21106-PA 17..141 15..140 312 47.6 Plus
Dwil\GK21095-PA 141 GK21095-PA 17..141 15..140 312 47.6 Plus
Dwil\GK12154-PA 141 GK12154-PA 19..141 17..140 309 47.6 Plus
Dwil\GK21084-PA 141 GK21084-PA 19..141 17..140 309 47.6 Plus
Dwil\GK12260-PA 141 GK12260-PA 19..141 17..140 309 47.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14087-PA 148 GE14087-PA 1..148 1..148 764 97.3 Plus
Dyak\GE20976-PA 141 GE20976-PA 4..141 6..140 342 47.5 Plus
Dyak\GE20981-PA 142 GE20981-PA 4..142 6..141 311 44.3 Plus
Dyak\LysS-PA 140 GE21126-PA 1..140 1..140 308 45.1 Plus
Dyak\GE21125-PA 140 GE21125-PA 19..140 18..140 308 46.3 Plus

MIP31483.hyp Sequence

Translation from 245 to 691

> MIP31483.hyp
MWPIWLLVLLTLSLATGRQVGRCSLARQLYRYGMAYNELPDWLCLVEGES
SFNTKAINPSNVDGSVDWGLFQINDRYWCKPADGRPSNDLCRLPCRLLLS
DDIRYSIACAKYIRKQQGFSAWVAWNNRCQGVKPNVNHCFRRRHRNSG*

MIP31483.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7798-PA 148 CG7798-PA 1..148 1..148 828 100 Plus
LysP-PA 141 CG9116-PA 12..141 10..140 349 47.3 Plus
LysB-PB 140 CG1179-PB 5..140 7..140 337 46 Plus
LysB-PA 140 CG1179-PA 5..140 7..140 337 46 Plus
LysD-PA 140 CG9118-PA 5..140 4..140 334 45.3 Plus