Clone MIP31849 Report

Search the DGRC for MIP31849

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:318
Well:49
Vector:pOTB7_DraIII
Associated Gene/TranscriptMst77F-RA
Protein status:MIP31849.pep: silver
Sequenced Size:1093

Clone Sequence Records

MIP31849.complete Sequence

1093 bp assembled on 2011-06-10

GenBank Submission: BT128734.1

> MIP31849.complete
AGTTAGTACACTACCTTTGAACGAGGAACAACTAAAATATTTCGATAAAA
TTGAGTACAGTTTTTTATACATATATAATTTTTTTTTGTATAATTCTGAG
TAACAAATTTGTTTGTGAAAATTTCTGTCGAGCAAGAATTGGTTGCAAAA
TGAGTAATCTGAAACAAAAGGATAGCAAGCCGGAGGTGGCAGTAACAAAA
TCAGTGAAAACCTATAAAAAATCAATTGAATATGTTAATTCCGACGCCTC
CGACATTGAAGAAGATATCAATAGGGCAGAGGACGAATACGCCTCATCGT
CTGGCTTTGTTAATTTTCTGAGGGACTTTAAGAAGCGCTACGGAGAATAT
TACTCGAATAACGAGATAAGACGGGCTGCTGAAACCCGATGGAACGAAAT
GTCATTCCGTCATCGATGCCAGTATTCTGCGGAACCATTGGACACTTTTC
ATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGCGTTCTAGTGAGGGCGAG
CACAGAATGCACTCTGAAATAAGTGGCTGCGCAGACACTTTCTTCGGTGC
CGGTGGCTCCAATAGCTGCACTCCAAGAAAGGAGAACAAGTGTTCCAAGC
CCAGGGTGCGGAAGAGTTGCCCCAAACCACGGGCGAAAACCTCGAAGCAA
CGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGCGCCCGACCCCGGAAGGC
ATGTCCCCGCCCCAGGAAGAAGATGGAATGCGGCAAGGCGAAGGCAAAGC
CAAGGTGTCTTAAGCCCAAGAGTTCCAAGCCCAAGTGCTCGGTGTAATCG
GAGGTTTCATCTTCCACACCCTTTCCTACACCACTTTTCGGCCATTTTTA
TTGATCAGGAACCAGTCAAAATTTCCCAAATGATGTAAACAACTTGCGTT
GCTAGAATCTATGAACTTGAGGAACCTCCAGTGAACCAGGAAATTAAGAA
ATCGATCATACGGATCTGATAAACCAAGGACATAACACAGGAAGGCCCAA
GCATTGATCCTCAAGGCAACGATAAGCGGTTGTACTGTTTAGAAATAAAG
GTTTTATGTCTGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP31849.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20805922..20806556 1065..431 3145 99.7 Minus
chr3L 24539361 chr3L 20806617..20807048 432..1 2160 100 Minus
chrU 10048995 chrU 8029309..8029816 945..433 1920 93 Minus
chrU 10048995 chrU 9819609..9819999 561..951 1455 92.6 Plus
chrU 10048995 chrU 6824377..6824717 951..610 1190 91.8 Minus
chrU 10048995 chrU 8029874..8030238 432..80 1190 89 Minus
chrU 10048995 chrU 7991203..7991422 951..723 810 91.3 Minus
chrU 10048995 chrU 9689645..9689861 291..89 485 84.8 Minus
chrU 10048995 chrU 6824228..6824337 1065..956 445 93.6 Minus
chrU 10048995 chrU 7991054..7991163 1065..956 445 93.6 Minus
chrU 10048995 chrU 8029154..8029263 1065..956 415 91.8 Minus
chrU 10048995 chrU 9820039..9820129 956..1046 365 93.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20816898..20817535 1068..431 3160 99.7 Minus
3L 28110227 3L 20817596..20818027 432..1 2160 100 Minus
Ymm 880023 Ymm 515609..516116 945..433 1920 93 Minus
Y 3667352 Y 3289701..3290218 431..951 1920 92.5 Plus
Y 3667352 Y 3285354..3285871 431..951 1905 92.3 Plus
Y 3667352 Y 3302187..3302704 431..951 1905 92.3 Plus
Y 3667352 Y 3293966..3294483 431..951 1875 92 Plus
Y 3667352 Y 3364784..3365200 535..951 1540 92.3 Plus
Y 3667352 Y 3354465..3354870 431..839 1515 91.9 Plus
Y 3667352 Y 3289209..3289637 12..432 1435 89.8 Plus
Y 3667352 Y 3318599..3319027 12..432 1435 89.8 Plus
Y 3667352 Y 3341184..3341546 431..797 1420 93.7 Plus
Y 3667352 Y 3297271..3297701 12..432 1405 89.4 Plus
Y 3667352 Y 3358926..3359286 433..797 1395 93.4 Plus
Y 3667352 Y 3336760..3337123 431..797 1380 92.4 Plus
Y 3667352 Y 3371242..3371602 433..797 1380 93.2 Plus
Y 3667352 Y 3350011..3350374 431..797 1365 92.1 Plus
Y 3667352 Y 3297764..3298126 431..797 1360 92.6 Plus
Y 3667352 Y 3327916..3328279 431..797 1350 91.8 Plus
Y 3667352 Y 3332337..3332699 431..797 1345 92.4 Plus
Ymm 880023 Ymm 516174..516538 432..80 1190 89 Minus
Ymm 880023 Ymm 578934..579274 951..610 1190 91.8 Minus
Y 3667352 Y 3319090..3319442 431..797 1180 89.4 Plus
Y 3667352 Y 3323503..3323855 431..797 1180 89.4 Plus
Y 3667352 Y 3336402..3336697 137..432 1150 92.6 Plus
Y 3667352 Y 3293608..3293903 137..432 1135 92.2 Plus
Y 3667352 Y 3301829..3302124 137..432 1135 92.2 Plus
Y 3667352 Y 3323145..3323440 137..432 1135 92.2 Plus
Y 3667352 Y 3327558..3327853 137..432 1135 92.2 Plus
Y 3667352 Y 3349653..3349948 137..432 1135 92.2 Plus
Y 3667352 Y 3354107..3354402 137..432 1135 92.2 Plus
Y 3667352 Y 3358573..3358868 137..432 1135 92.2 Plus
Y 3667352 Y 3370889..3371184 137..432 1135 92.2 Plus
Y 3667352 Y 3340826..3341121 137..432 1105 91.6 Plus
Y 3667352 Y 3345249..3345544 137..432 1105 91.6 Plus
Y 3667352 Y 3376224..3376579 89..432 1100 87.9 Plus
Y 3667352 Y 3284939..3285291 89..432 1080 88.2 Plus
Y 3667352 Y 3331982..3332274 137..432 1055 91.2 Plus
Y 3667352 Y 3345663..3345950 507..797 1045 91.4 Plus
Y 3667352 Y 3376698..3376984 507..797 980 90.7 Plus
U 3151297 U 973340..973559 951..723 810 91.3 Minus
Y 3667352 Y 3364463..3364742 89..359 790 86.9 Plus
U 3151297 U 1324257..1324473 291..89 485 84.8 Minus
Ymm 880023 Ymm 578783..578894 1067..956 455 93.8 Minus
Y 3667352 Y 3365240..3365351 956..1067 455 93.8 Plus
Y 3667352 Y 3285911..3286022 956..1067 455 93.8 Plus
Y 3667352 Y 3290258..3290369 956..1067 455 93.8 Plus
Y 3667352 Y 3294523..3294634 956..1067 455 93.8 Plus
U 3151297 U 973189..973300 1067..956 455 93.8 Minus
Ymm 880023 Ymm 515451..515563 1068..956 430 92 Minus
Y 3667352 Y 3302744..3302834 956..1046 365 93.4 Plus
Y 3667352 Y 3284311..3284363 12..64 235 96.2 Plus
Y 3667352 Y 3363852..3363904 12..64 235 96.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20809998..20810635 1068..431 3160 99.6 Minus
3L 28103327 3L 20810696..20811127 432..1 2160 100 Minus
Y 3410481 Y 3107176..3107693 431..951 1950 92.5 Plus
Y 3410481 Y 3119662..3120179 431..951 1935 92.3 Plus
Y 3410481 Y 3102829..3103346 431..951 1935 92.3 Plus
Y 3410481 Y 3111441..3111958 431..951 1905 91.9 Plus
Y 3410481 Y 3182259..3182675 535..951 1560 92.3 Plus
Y 3410481 Y 3171940..3172345 431..839 1525 91.9 Plus
Y 3410481 Y 3158659..3159021 431..797 1440 93.7 Plus
Y 3410481 Y 3176401..3176761 433..797 1415 93.4 Plus
Y 3410481 Y 3188717..3189077 433..797 1400 93.1 Plus
Y 3410481 Y 3154235..3154598 431..797 1390 92.3 Plus
Y 3410481 Y 3115239..3115601 431..797 1380 92.6 Plus
Y 3410481 Y 3167486..3167849 431..797 1375 92 Plus
Y 3410481 Y 3149812..3150174 431..797 1365 92.3 Plus
Y 3410481 Y 3145391..3145754 431..797 1360 91.8 Plus
Y 3410481 Y 3153877..3154172 137..432 1150 92.5 Plus
Y 3410481 Y 3188364..3188659 137..432 1135 92.2 Plus
Y 3410481 Y 3176048..3176343 137..432 1135 92.2 Plus
Y 3410481 Y 3171582..3171877 137..432 1135 92.2 Plus
Y 3410481 Y 3167128..3167423 137..432 1135 92.2 Plus
Y 3410481 Y 3145033..3145328 137..432 1135 92.2 Plus
Y 3410481 Y 3140620..3140915 137..432 1135 92.2 Plus
Y 3410481 Y 3136207..3136502 137..432 1135 92.2 Plus
Y 3410481 Y 3119304..3119599 137..432 1135 92.2 Plus
Y 3410481 Y 3111083..3111378 137..432 1135 92.2 Plus
Y 3410481 Y 3106817..3107112 137..432 1135 92.2 Plus
Y 3410481 Y 3114881..3115176 137..432 1105 91.5 Plus
Y 3410481 Y 3162724..3163019 137..432 1105 91.5 Plus
Y 3410481 Y 3158301..3158596 137..432 1105 91.5 Plus
Y 3410481 Y 3193759..3194054 137..432 1075 90.8 Plus
Y 3410481 Y 3141048..3141330 512..797 1060 91.9 Plus
Y 3410481 Y 3136635..3136917 512..797 1060 91.9 Plus
Y 3410481 Y 3163138..3163425 507..797 1055 91.4 Plus
Y 3410481 Y 3194173..3194459 507..797 1000 90.7 Plus
Y 3410481 Y 3102544..3102766 210..432 875 92.8 Plus
Y 3410481 Y 3149527..3149749 210..432 875 92.8 Plus
Y 3410481 Y 3182068..3182217 210..359 585 92.6 Plus
Y 3410481 Y 3114746..3114872 12..140 485 93 Plus
Y 3410481 Y 3106684..3106808 12..140 485 93 Plus
Y 3410481 Y 3136074..3136198 12..140 485 93 Plus
Y 3410481 Y 3182715..3182826 956..1067 455 93.7 Plus
Y 3410481 Y 3111998..3112109 956..1067 455 93.7 Plus
Y 3410481 Y 3107733..3107844 956..1067 455 93.7 Plus
Y 3410481 Y 3103386..3103497 956..1067 455 93.7 Plus
Y 3410481 Y 3120219..3120309 956..1046 365 93.4 Plus
Y 3410481 Y 3140978..3141048 431..501 280 92.9 Plus
Y 3410481 Y 3136565..3136635 431..501 280 92.9 Plus
Y 3410481 Y 3181998..3182064 137..203 260 92.5 Plus
Y 3410481 Y 3102474..3102540 137..203 260 92.5 Plus
Y 3410481 Y 3149457..3149523 137..203 260 92.5 Plus
Y 3410481 Y 3181327..3181379 12..64 235 96.2 Plus
Y 3410481 Y 3101786..3101838 12..64 235 96.2 Plus
Blast to na_te.dros performed 2019-03-15 10:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dtei\I-element 5386 Dtei\I-element DTEII 5386bp 74..134 140..79 127 69.4 Minus
Ddip\Bari1 1677 Ddip\Bari1 DDBARI1 1676bp Derived from Y13852. 1369..1488 33..144 121 60.8 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 7077..7132 129..78 109 69.6 Minus

MIP31849.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:44:30 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20805922..20806555 432..1065 99 <- Minus
chr3L 20806618..20807048 1..431 91   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-10 13:24:48 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 1..648 150..797 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:23:57 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 1..648 150..797 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:10:40 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 1..648 150..797 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-10 13:24:47 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 24..1088 1..1065 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:23:57 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 1..1065 1..1065 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:40 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
Mst77F-RA 1..1065 1..1065 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20816901..20817534 432..1065 99 <- Minus
3L 20817597..20818027 1..431 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20816901..20817534 432..1065 99 <- Minus
3L 20817597..20818027 1..431 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20816901..20817534 432..1065 99 <- Minus
3L 20817597..20818027 1..431 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:23:57 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20810001..20810634 432..1065 99 <- Minus
arm_3L 20810697..20811127 1..431 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:08:04 Download gff for MIP31849.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20810001..20810634 432..1065 99 <- Minus
3L 20810697..20811127 1..431 100   Minus

MIP31849.pep Sequence

Translation from 149 to 796

> MIP31849.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSV*

MIP31849.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13278-PA 222 GG13278-PA 1..222 1..215 582 59.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-PA 215 CG3354-PA 1..215 1..215 1148 99.5 Plus
Mst77Y-9-PA 214 CG45769-PA 1..214 1..215 1003 88.8 Plus
CG45766-PA 214 CG45766-PA 1..214 1..215 997 88.4 Plus
CG45764-PA 214 CG45764-PA 1..214 1..215 997 88.4 Plus
CG45770-PA 214 CG45770-PA 1..214 1..215 988 87.4 Plus
CG45765-PA 214 CG45765-PA 1..214 1..215 988 87.4 Plus
Mst77Y-7-PA 214 CG45768-PA 1..214 1..215 986 87.4 Plus
Mst77Y-4-PA 213 CG45763-PA 1..213 1..215 985 87.9 Plus
Mst77Y-13-PA 214 CG45767-PA 1..214 1..215 983 87.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22182-PA 214 GM22182-PA 1..214 1..215 839 77.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12157-PA 217 GD12157-PA 1..217 1..215 857 78.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22375-PA 219 GE22375-PA 1..201 1..190 617 65.7 Plus
Dyak\GE22731-PA 219 GE22731-PA 1..201 1..190 617 65.7 Plus

MIP31849.hyp Sequence

Translation from 149 to 796

> MIP31849.hyp
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSM*

MIP31849.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
Mst77F-PA 215 CG3354-PA 1..215 1..215 1152 100 Plus
Mst77Y-9-PA 214 CG45769-PA 1..214 1..215 1000 88.4 Plus
CG45766-PA 214 CG45766-PA 1..214 1..215 994 87.9 Plus
CG45764-PA 214 CG45764-PA 1..214 1..215 994 87.9 Plus
CG45770-PA 214 CG45770-PA 1..214 1..215 985 87 Plus