Clone Sequence Records
MIP31849.complete Sequence
1093 bp assembled on 2011-06-10
GenBank Submission: BT128734.1
> MIP31849.complete
AGTTAGTACACTACCTTTGAACGAGGAACAACTAAAATATTTCGATAAAA
TTGAGTACAGTTTTTTATACATATATAATTTTTTTTTGTATAATTCTGAG
TAACAAATTTGTTTGTGAAAATTTCTGTCGAGCAAGAATTGGTTGCAAAA
TGAGTAATCTGAAACAAAAGGATAGCAAGCCGGAGGTGGCAGTAACAAAA
TCAGTGAAAACCTATAAAAAATCAATTGAATATGTTAATTCCGACGCCTC
CGACATTGAAGAAGATATCAATAGGGCAGAGGACGAATACGCCTCATCGT
CTGGCTTTGTTAATTTTCTGAGGGACTTTAAGAAGCGCTACGGAGAATAT
TACTCGAATAACGAGATAAGACGGGCTGCTGAAACCCGATGGAACGAAAT
GTCATTCCGTCATCGATGCCAGTATTCTGCGGAACCATTGGACACTTTTC
ATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGCGTTCTAGTGAGGGCGAG
CACAGAATGCACTCTGAAATAAGTGGCTGCGCAGACACTTTCTTCGGTGC
CGGTGGCTCCAATAGCTGCACTCCAAGAAAGGAGAACAAGTGTTCCAAGC
CCAGGGTGCGGAAGAGTTGCCCCAAACCACGGGCGAAAACCTCGAAGCAA
CGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGCGCCCGACCCCGGAAGGC
ATGTCCCCGCCCCAGGAAGAAGATGGAATGCGGCAAGGCGAAGGCAAAGC
CAAGGTGTCTTAAGCCCAAGAGTTCCAAGCCCAAGTGCTCGGTGTAATCG
GAGGTTTCATCTTCCACACCCTTTCCTACACCACTTTTCGGCCATTTTTA
TTGATCAGGAACCAGTCAAAATTTCCCAAATGATGTAAACAACTTGCGTT
GCTAGAATCTATGAACTTGAGGAACCTCCAGTGAACCAGGAAATTAAGAA
ATCGATCATACGGATCTGATAAACCAAGGACATAACACAGGAAGGCCCAA
GCATTGATCCTCAAGGCAACGATAAGCGGTTGTACTGTTTAGAAATAAAG
GTTTTATGTCTGATCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP31849.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:43:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 20805922..20806556 | 1065..431 | 3145 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 20806617..20807048 | 432..1 | 2160 | 100 | Minus |
chrU | 10048995 | chrU | 8029309..8029816 | 945..433 | 1920 | 93 | Minus |
chrU | 10048995 | chrU | 9819609..9819999 | 561..951 | 1455 | 92.6 | Plus |
chrU | 10048995 | chrU | 6824377..6824717 | 951..610 | 1190 | 91.8 | Minus |
chrU | 10048995 | chrU | 8029874..8030238 | 432..80 | 1190 | 89 | Minus |
chrU | 10048995 | chrU | 7991203..7991422 | 951..723 | 810 | 91.3 | Minus |
chrU | 10048995 | chrU | 9689645..9689861 | 291..89 | 485 | 84.8 | Minus |
chrU | 10048995 | chrU | 6824228..6824337 | 1065..956 | 445 | 93.6 | Minus |
chrU | 10048995 | chrU | 7991054..7991163 | 1065..956 | 445 | 93.6 | Minus |
chrU | 10048995 | chrU | 8029154..8029263 | 1065..956 | 415 | 91.8 | Minus |
chrU | 10048995 | chrU | 9820039..9820129 | 956..1046 | 365 | 93.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:43:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20816898..20817535 | 1068..431 | 3160 | 99.7 | Minus |
3L | 28110227 | 3L | 20817596..20818027 | 432..1 | 2160 | 100 | Minus |
Ymm | 880023 | Ymm | 515609..516116 | 945..433 | 1920 | 93 | Minus |
Y | 3667352 | Y | 3289701..3290218 | 431..951 | 1920 | 92.5 | Plus |
Y | 3667352 | Y | 3285354..3285871 | 431..951 | 1905 | 92.3 | Plus |
Y | 3667352 | Y | 3302187..3302704 | 431..951 | 1905 | 92.3 | Plus |
Y | 3667352 | Y | 3293966..3294483 | 431..951 | 1875 | 92 | Plus |
Y | 3667352 | Y | 3364784..3365200 | 535..951 | 1540 | 92.3 | Plus |
Y | 3667352 | Y | 3354465..3354870 | 431..839 | 1515 | 91.9 | Plus |
Y | 3667352 | Y | 3289209..3289637 | 12..432 | 1435 | 89.8 | Plus |
Y | 3667352 | Y | 3318599..3319027 | 12..432 | 1435 | 89.8 | Plus |
Y | 3667352 | Y | 3341184..3341546 | 431..797 | 1420 | 93.7 | Plus |
Y | 3667352 | Y | 3297271..3297701 | 12..432 | 1405 | 89.4 | Plus |
Y | 3667352 | Y | 3358926..3359286 | 433..797 | 1395 | 93.4 | Plus |
Y | 3667352 | Y | 3336760..3337123 | 431..797 | 1380 | 92.4 | Plus |
Y | 3667352 | Y | 3371242..3371602 | 433..797 | 1380 | 93.2 | Plus |
Y | 3667352 | Y | 3350011..3350374 | 431..797 | 1365 | 92.1 | Plus |
Y | 3667352 | Y | 3297764..3298126 | 431..797 | 1360 | 92.6 | Plus |
Y | 3667352 | Y | 3327916..3328279 | 431..797 | 1350 | 91.8 | Plus |
Y | 3667352 | Y | 3332337..3332699 | 431..797 | 1345 | 92.4 | Plus |
Ymm | 880023 | Ymm | 516174..516538 | 432..80 | 1190 | 89 | Minus |
Ymm | 880023 | Ymm | 578934..579274 | 951..610 | 1190 | 91.8 | Minus |
Y | 3667352 | Y | 3319090..3319442 | 431..797 | 1180 | 89.4 | Plus |
Y | 3667352 | Y | 3323503..3323855 | 431..797 | 1180 | 89.4 | Plus |
Y | 3667352 | Y | 3336402..3336697 | 137..432 | 1150 | 92.6 | Plus |
Y | 3667352 | Y | 3293608..3293903 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3301829..3302124 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3323145..3323440 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3327558..3327853 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3349653..3349948 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3354107..3354402 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3358573..3358868 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3370889..3371184 | 137..432 | 1135 | 92.2 | Plus |
Y | 3667352 | Y | 3340826..3341121 | 137..432 | 1105 | 91.6 | Plus |
Y | 3667352 | Y | 3345249..3345544 | 137..432 | 1105 | 91.6 | Plus |
Y | 3667352 | Y | 3376224..3376579 | 89..432 | 1100 | 87.9 | Plus |
Y | 3667352 | Y | 3284939..3285291 | 89..432 | 1080 | 88.2 | Plus |
Y | 3667352 | Y | 3331982..3332274 | 137..432 | 1055 | 91.2 | Plus |
Y | 3667352 | Y | 3345663..3345950 | 507..797 | 1045 | 91.4 | Plus |
Y | 3667352 | Y | 3376698..3376984 | 507..797 | 980 | 90.7 | Plus |
U | 3151297 | U | 973340..973559 | 951..723 | 810 | 91.3 | Minus |
Y | 3667352 | Y | 3364463..3364742 | 89..359 | 790 | 86.9 | Plus |
U | 3151297 | U | 1324257..1324473 | 291..89 | 485 | 84.8 | Minus |
Ymm | 880023 | Ymm | 578783..578894 | 1067..956 | 455 | 93.8 | Minus |
Y | 3667352 | Y | 3365240..3365351 | 956..1067 | 455 | 93.8 | Plus |
Y | 3667352 | Y | 3285911..3286022 | 956..1067 | 455 | 93.8 | Plus |
Y | 3667352 | Y | 3290258..3290369 | 956..1067 | 455 | 93.8 | Plus |
Y | 3667352 | Y | 3294523..3294634 | 956..1067 | 455 | 93.8 | Plus |
U | 3151297 | U | 973189..973300 | 1067..956 | 455 | 93.8 | Minus |
Ymm | 880023 | Ymm | 515451..515563 | 1068..956 | 430 | 92 | Minus |
Y | 3667352 | Y | 3302744..3302834 | 956..1046 | 365 | 93.4 | Plus |
Y | 3667352 | Y | 3284311..3284363 | 12..64 | 235 | 96.2 | Plus |
Y | 3667352 | Y | 3363852..3363904 | 12..64 | 235 | 96.2 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 20809998..20810635 | 1068..431 | 3160 | 99.6 | Minus |
3L | 28103327 | 3L | 20810696..20811127 | 432..1 | 2160 | 100 | Minus |
Y | 3410481 | Y | 3107176..3107693 | 431..951 | 1950 | 92.5 | Plus |
Y | 3410481 | Y | 3119662..3120179 | 431..951 | 1935 | 92.3 | Plus |
Y | 3410481 | Y | 3102829..3103346 | 431..951 | 1935 | 92.3 | Plus |
Y | 3410481 | Y | 3111441..3111958 | 431..951 | 1905 | 91.9 | Plus |
Y | 3410481 | Y | 3182259..3182675 | 535..951 | 1560 | 92.3 | Plus |
Y | 3410481 | Y | 3171940..3172345 | 431..839 | 1525 | 91.9 | Plus |
Y | 3410481 | Y | 3158659..3159021 | 431..797 | 1440 | 93.7 | Plus |
Y | 3410481 | Y | 3176401..3176761 | 433..797 | 1415 | 93.4 | Plus |
Y | 3410481 | Y | 3188717..3189077 | 433..797 | 1400 | 93.1 | Plus |
Y | 3410481 | Y | 3154235..3154598 | 431..797 | 1390 | 92.3 | Plus |
Y | 3410481 | Y | 3115239..3115601 | 431..797 | 1380 | 92.6 | Plus |
Y | 3410481 | Y | 3167486..3167849 | 431..797 | 1375 | 92 | Plus |
Y | 3410481 | Y | 3149812..3150174 | 431..797 | 1365 | 92.3 | Plus |
Y | 3410481 | Y | 3145391..3145754 | 431..797 | 1360 | 91.8 | Plus |
Y | 3410481 | Y | 3153877..3154172 | 137..432 | 1150 | 92.5 | Plus |
Y | 3410481 | Y | 3188364..3188659 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3176048..3176343 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3171582..3171877 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3167128..3167423 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3145033..3145328 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3140620..3140915 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3136207..3136502 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3119304..3119599 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3111083..3111378 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3106817..3107112 | 137..432 | 1135 | 92.2 | Plus |
Y | 3410481 | Y | 3114881..3115176 | 137..432 | 1105 | 91.5 | Plus |
Y | 3410481 | Y | 3162724..3163019 | 137..432 | 1105 | 91.5 | Plus |
Y | 3410481 | Y | 3158301..3158596 | 137..432 | 1105 | 91.5 | Plus |
Y | 3410481 | Y | 3193759..3194054 | 137..432 | 1075 | 90.8 | Plus |
Y | 3410481 | Y | 3141048..3141330 | 512..797 | 1060 | 91.9 | Plus |
Y | 3410481 | Y | 3136635..3136917 | 512..797 | 1060 | 91.9 | Plus |
Y | 3410481 | Y | 3163138..3163425 | 507..797 | 1055 | 91.4 | Plus |
Y | 3410481 | Y | 3194173..3194459 | 507..797 | 1000 | 90.7 | Plus |
Y | 3410481 | Y | 3102544..3102766 | 210..432 | 875 | 92.8 | Plus |
Y | 3410481 | Y | 3149527..3149749 | 210..432 | 875 | 92.8 | Plus |
Y | 3410481 | Y | 3182068..3182217 | 210..359 | 585 | 92.6 | Plus |
Y | 3410481 | Y | 3114746..3114872 | 12..140 | 485 | 93 | Plus |
Y | 3410481 | Y | 3106684..3106808 | 12..140 | 485 | 93 | Plus |
Y | 3410481 | Y | 3136074..3136198 | 12..140 | 485 | 93 | Plus |
Y | 3410481 | Y | 3182715..3182826 | 956..1067 | 455 | 93.7 | Plus |
Y | 3410481 | Y | 3111998..3112109 | 956..1067 | 455 | 93.7 | Plus |
Y | 3410481 | Y | 3107733..3107844 | 956..1067 | 455 | 93.7 | Plus |
Y | 3410481 | Y | 3103386..3103497 | 956..1067 | 455 | 93.7 | Plus |
Y | 3410481 | Y | 3120219..3120309 | 956..1046 | 365 | 93.4 | Plus |
Y | 3410481 | Y | 3140978..3141048 | 431..501 | 280 | 92.9 | Plus |
Y | 3410481 | Y | 3136565..3136635 | 431..501 | 280 | 92.9 | Plus |
Y | 3410481 | Y | 3181998..3182064 | 137..203 | 260 | 92.5 | Plus |
Y | 3410481 | Y | 3102474..3102540 | 137..203 | 260 | 92.5 | Plus |
Y | 3410481 | Y | 3149457..3149523 | 137..203 | 260 | 92.5 | Plus |
Y | 3410481 | Y | 3181327..3181379 | 12..64 | 235 | 96.2 | Plus |
Y | 3410481 | Y | 3101786..3101838 | 12..64 | 235 | 96.2 | Plus |
Blast to na_te.dros performed 2019-03-15 10:43:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 74..134 | 140..79 | 127 | 69.4 | Minus |
Ddip\Bari1 | 1677 | Ddip\Bari1 DDBARI1 1676bp Derived from Y13852. | 1369..1488 | 33..144 | 121 | 60.8 | Plus |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7077..7132 | 129..78 | 109 | 69.6 | Minus |
MIP31849.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:44:30 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 20805922..20806555 | 432..1065 | 99 | <- | Minus |
chr3L | 20806618..20807048 | 1..431 | 91 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-10 13:24:48 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 1..648 | 150..797 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:23:57 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 1..648 | 150..797 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:10:40 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 1..648 | 150..797 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-10 13:24:47 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 24..1088 | 1..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:23:57 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 1..1065 | 1..1065 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:40 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst77F-RA | 1..1065 | 1..1065 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20816901..20817534 | 432..1065 | 99 | <- | Minus |
3L | 20817597..20818027 | 1..431 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20816901..20817534 | 432..1065 | 99 | <- | Minus |
3L | 20817597..20818027 | 1..431 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:44:30 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20816901..20817534 | 432..1065 | 99 | <- | Minus |
3L | 20817597..20818027 | 1..431 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:23:57 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20810001..20810634 | 432..1065 | 99 | <- | Minus |
arm_3L | 20810697..20811127 | 1..431 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:08:04 Download gff for
MIP31849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20810001..20810634 | 432..1065 | 99 | <- | Minus |
3L | 20810697..20811127 | 1..431 | 100 | | Minus |
MIP31849.pep Sequence
Translation from 149 to 796
> MIP31849.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSV*
MIP31849.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:59:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG13278-PA | 222 | GG13278-PA | 1..222 | 1..215 | 582 | 59.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst77F-PA | 215 | CG3354-PA | 1..215 | 1..215 | 1148 | 99.5 | Plus |
Mst77Y-9-PA | 214 | CG45769-PA | 1..214 | 1..215 | 1003 | 88.8 | Plus |
CG45766-PA | 214 | CG45766-PA | 1..214 | 1..215 | 997 | 88.4 | Plus |
CG45764-PA | 214 | CG45764-PA | 1..214 | 1..215 | 997 | 88.4 | Plus |
CG45770-PA | 214 | CG45770-PA | 1..214 | 1..215 | 988 | 87.4 | Plus |
CG45765-PA | 214 | CG45765-PA | 1..214 | 1..215 | 988 | 87.4 | Plus |
Mst77Y-7-PA | 214 | CG45768-PA | 1..214 | 1..215 | 986 | 87.4 | Plus |
Mst77Y-4-PA | 213 | CG45763-PA | 1..213 | 1..215 | 985 | 87.9 | Plus |
Mst77Y-13-PA | 214 | CG45767-PA | 1..214 | 1..215 | 983 | 87.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22182-PA | 214 | GM22182-PA | 1..214 | 1..215 | 839 | 77.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:59:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD12157-PA | 217 | GD12157-PA | 1..217 | 1..215 | 857 | 78.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:59:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE22375-PA | 219 | GE22375-PA | 1..201 | 1..190 | 617 | 65.7 | Plus |
Dyak\GE22731-PA | 219 | GE22731-PA | 1..201 | 1..190 | 617 | 65.7 | Plus |
MIP31849.hyp Sequence
Translation from 149 to 796
> MIP31849.hyp
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSM*
MIP31849.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:11:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst77F-PA | 215 | CG3354-PA | 1..215 | 1..215 | 1152 | 100 | Plus |
Mst77Y-9-PA | 214 | CG45769-PA | 1..214 | 1..215 | 1000 | 88.4 | Plus |
CG45766-PA | 214 | CG45766-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
CG45764-PA | 214 | CG45764-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
CG45770-PA | 214 | CG45770-PA | 1..214 | 1..215 | 985 | 87 | Plus |