Clone Sequence Records
MIP31873.complete Sequence
794 bp assembled on 2011-06-09
GenBank Submission: BT128727.1
> MIP31873.complete
ATTTTCGATTTGAACGAAACGCATATTCATACATTCTTTTCGAGATATTT
TATAAGTTTTGTAAATTCACTCATTCTAAATAACGTCATTTCGCTATGAG
TTCTATCGAGTGGATCGCTGATATGCTTTTCTACGCTATGCGCACCTACC
TCAAGATGACCGCACCCAGTTGCGATGCACACTTCCTTATCAATGCCCTT
GGAAAGATTGAACATCTTATACATTTCATTGAATTTTCCATTATGATAAT
ACGGCGGCCAAGAAATCTCATGGTTTTGACTAATAGCCGAGAGAGCCGCC
TTCAACTCCGCAATTGCCTTTCAATGTTAAGGACTTGGGCACAAGTGATA
TACGCATTGCTATCCGTGCTTGCTTTAATCCATATCAAAACGATTTACAT
TAGTATCGCGCTGTTGATTTCCGGCATCGTCTTGTTCACTGATATGATCT
TCATGGCAATAAATGGCGTACATGGCAGGAGAACGCTGCGACCCGCGCAG
ATTCTATGGATTTCGTTGTGTTGTTGCACTTGGGTGCCATGGATCCTGGA
CGAAATGATCAACTATTTGTATAAATGATGGACGCAATGGCAATGTTGGA
CTTTTTATCTTTTAAAATTATCCGTGATATGTATGGGAAATAAAGGATTA
CACACCTAATCCTACATTCTCAATTCGTTCACGTGGATGTCTGTGGACTT
ATTGCGACGACTGTATACTTTCAATTTGACAAAAGTTTTGAGCTTAATTA
AATTTGTTGCTGCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP31873.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:41:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15112783..15113181 | 766..368 | 1995 | 100 | Minus |
chrX | 22417052 | chrX | 15113498..15113703 | 206..1 | 1030 | 100 | Minus |
chrX | 22417052 | chrX | 15113274..15113437 | 368..205 | 820 | 100 | Minus |
chrX | 22417052 | chrX | 15866751..15866929 | 23..201 | 370 | 80.4 | Plus |
chrX | 22417052 | chrX | 15110354..15110434 | 765..685 | 345 | 95.1 | Minus |
chrX | 22417052 | chrX | 15867305..15867411 | 485..591 | 250 | 82.2 | Plus |
chrX | 22417052 | chrX | 15095818..15095916 | 755..656 | 225 | 84 | Minus |
chrX | 22417052 | chrX | 15867020..15867157 | 231..368 | 180 | 75.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:41:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15222658..15223056 | 766..368 | 1995 | 100 | Minus |
X | 23542271 | X | 15223373..15223578 | 206..1 | 1030 | 100 | Minus |
X | 23542271 | X | 15223149..15223312 | 368..205 | 820 | 100 | Minus |
X | 23542271 | X | 15976910..15977088 | 23..201 | 370 | 80.4 | Plus |
X | 23542271 | X | 15220229..15220309 | 765..685 | 330 | 93.8 | Minus |
X | 23542271 | X | 15977465..15977571 | 485..591 | 250 | 82.2 | Plus |
X | 23542271 | X | 15205710..15205808 | 755..656 | 225 | 84 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:12:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15230756..15231154 | 766..368 | 1995 | 100 | Minus |
X | 23527363 | X | 15231471..15231676 | 206..1 | 1030 | 100 | Minus |
X | 23527363 | X | 15231247..15231410 | 368..205 | 820 | 100 | Minus |
X | 23527363 | X | 15985008..15985186 | 23..201 | 370 | 80.4 | Plus |
X | 23527363 | X | 15228327..15228407 | 765..685 | 330 | 93.8 | Minus |
X | 23527363 | X | 15985563..15985669 | 485..591 | 250 | 82.2 | Plus |
X | 23527363 | X | 15213808..15213906 | 755..656 | 235 | 84 | Minus |
Blast to na_te.dros performed 2019-03-15 10:41:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 5878..6055 | 762..590 | 112 | 55.6 | Minus |
MIP31873.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:42:36 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15112782..15113180 | 369..767 | 99 | <- | Minus |
chrX | 15113274..15113435 | 207..368 | 100 | <- | Minus |
chrX | 15113498..15113703 | 1..206 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-06-09 17:41:29 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 1..483 | 96..578 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:22:38 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 1..483 | 96..578 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:09:18 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 1..483 | 96..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-09 17:41:28 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 1..686 | 81..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:22:38 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 1..686 | 81..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:18 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43076-RA | 5..770 | 1..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:36 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15223373..15223578 | 1..206 | 100 | | Minus |
X | 15222657..15223055 | 369..767 | 99 | <- | Minus |
X | 15223149..15223310 | 207..368 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:36 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15223373..15223578 | 1..206 | 100 | | Minus |
X | 15222657..15223055 | 369..767 | 99 | <- | Minus |
X | 15223149..15223310 | 207..368 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:42:36 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15223373..15223578 | 1..206 | 100 | | Minus |
X | 15222657..15223055 | 369..767 | 99 | <- | Minus |
X | 15223149..15223310 | 207..368 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:22:38 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15117406..15117611 | 1..206 | 100 | | Minus |
arm_X | 15117182..15117343 | 207..368 | 100 | <- | Minus |
arm_X | 15116690..15117088 | 369..767 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:07:56 Download gff for
MIP31873.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15230755..15231153 | 369..767 | 99 | <- | Minus |
X | 15231247..15231408 | 207..368 | 100 | <- | Minus |
X | 15231471..15231676 | 1..206 | 100 | | Minus |
MIP31873.pep Sequence
Translation from 95 to 577
> MIP31873.pep
MSSIEWIADMLFYAMRTYLKMTAPSCDAHFLINALGKIEHLIHFIEFSIM
IIRRPRNLMVLTNSRESRLQLRNCLSMLRTWAQVIYALLSVLALIHIKTI
YISIALLISGIVLFTDMIFMAINGVHGRRTLRPAQILWISLCCCTWVPWI
LDEMINYLYK*
MIP31873.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43076-PA | 160 | CG43076-PA | 1..160 | 1..160 | 831 | 100 | Plus |
CG42766-PA | 98 | CG42766-PA | 1..98 | 1..98 | 248 | 51 | Plus |
CG42766-PB | 98 | CG42766-PB | 1..92 | 1..92 | 223 | 50 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..174 | 1..157 | 153 | 26.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:55:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17259-PA | 84 | GD17259-PA | 1..78 | 15..92 | 218 | 55.1 | Plus |
Dsim\GD15815-PA | 66 | GD15815-PA | 1..37 | 1..37 | 164 | 75.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16063-PA | 180 | GE16063-PA | 1..178 | 1..156 | 150 | 26.1 | Plus |
Dyak\GE16065-PA | 180 | GE16065-PA | 1..178 | 1..156 | 140 | 25.5 | Plus |
MIP31873.hyp Sequence
Translation from 95 to 577
> MIP31873.hyp
MSSIEWIADMLFYAMRTYLKMTAPSCDAHFLINALGKIEHLIHFIEFSIM
IIRRPRNLMVLTNSRESRLQLRNCLSMLRTWAQVIYALLSVLALIHIKTI
YISIALLISGIVLFTDMIFMAINGVHGRRTLRPAQILWISLCCCTWVPWI
LDEMINYLYK*
MIP31873.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43076-PA | 160 | CG43076-PA | 1..160 | 1..160 | 831 | 100 | Plus |
CG42766-PA | 98 | CG42766-PA | 1..98 | 1..98 | 248 | 51 | Plus |
CG42766-PB | 98 | CG42766-PB | 1..92 | 1..92 | 223 | 50 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..174 | 1..157 | 153 | 26.7 | Plus |