Clone MIP32033 Report

Search the DGRC for MIP32033

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:320
Well:33
Vector:pOTB7
Associated Gene/TranscriptCG32811-RB
Protein status:MIP32033.pep: gold
Sequenced Size:387

Clone Sequence Records

MIP32033.complete Sequence

387 bp assembled on 2011-08-19

GenBank Submission: BT128804.1

> MIP32033.complete
TAAAACAATTCAACCAGAACTCAGCATGGACCTCATTGTGCCACCGAACG
GACTCTATGAGATGCCACACCAACCAGAGTATCCGGATTATGAGGCGATG
AGAAGACCGGTAGAGTCGTTGCGCATGGTGAAGCAGAAGGAAGTTCTGGT
CGATAGGGAACTCGAGTTTTTCTTCAATACGGAAGATATAACGAAAGTCA
ATTCCGAGGTGTTTCGAGGTGTGACTAGTGGTCACAGCACAGAATTTGGG
ACTCGTTAGCGATTCGTTTTCGACTGGGGGCATGTTCCAGAATGATTGTA
ATATGGACGAAAATTTAAGATAAGATCTATCAGAATGAAATTTAAATTCA
AATTAAAAAGTTCCCCCTACTAAAAAAAAAAAAAAAA

MIP32033.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 1191958..1192330 371..1 1800 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:52:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1297982..1298356 373..1 1810 99.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 1306080..1306454 373..1 1820 99.4 Minus
Blast to na_te.dros performed on 2019-03-15 10:52:32 has no hits.

MIP32033.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:53:26 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 1191958..1192330 1..371 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-19 16:32:35 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 1..234 26..259 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:28:08 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 1..234 26..259 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:14:47 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 1..234 26..259 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-19 16:32:34 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 32..402 1..369 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:28:08 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 32..404 1..371 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:47 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
CG32811-RB 32..404 1..371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:26 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
X 1297984..1298356 1..371 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:26 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
X 1297984..1298356 1..371 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:26 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
X 1297984..1298356 1..371 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:28:08 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1192017..1192389 1..371 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:46:51 Download gff for MIP32033.complete
Subject Subject Range Query Range Percent Splice Strand
X 1306082..1306454 1..371 99   Minus

MIP32033.hyp Sequence

Translation from 0 to 258

> MIP32033.hyp
KTIQPELSMDLIVPPNGLYEMPHQPEYPDYEAMRRPVESLRMVKQKEVLV
DRELEFFFNTEDITKVNSEVFRGVTSGHSTEFGTR*

MIP32033.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG32811-PB 77 CG32811-PB 1..77 9..85 405 100 Plus

MIP32033.pep Sequence

Translation from 1 to 258

> MIP32033.pep
KTIQPELSMDLIVPPNGLYEMPHQPEYPDYEAMRRPVESLRMVKQKEVLV
DRELEFFFNTEDITKVNSEVFRGVTSGHSTEFGTR*

MIP32033.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:25:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12708-PA 130 GG12708-PA 13..72 11..67 147 57.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG32811-PB 77 CG32811-PB 1..77 9..85 405 100 Plus