Clone Sequence Records
MIP32146.complete Sequence
648 bp assembled on 2011-08-19
GenBank Submission: BT128806.1
> MIP32146.complete
ATGCGTTGTATGCTTATAGTATTTGCCATAGCTGCTGTAAGCCTTTCGTG
TGCTGCTCCTGCGAAATCGCAAAACGAGATGTTAGCTCATTTCTTTGACT
ATGCTGACACCCTCCGTGGCATTCAAATCCATAATATGATGTCACTCACC
ATCAAATTCGTGCAACAAGTTGTGGACACAGTTCCGCTTGAACAACGTGG
ACCGGGAACGGCTGCCCTCCAGGCCTATGCCAACAAGGGCAAGAGTCTCA
AACAGCGAGGCACAACTGGCGAGAAATATAACTATATCTACGAACTGCAA
CAGGTATTCGAGGGACTCAACAGCGAGCTGAGTCAATCGGCACCTGAATC
CCAGGTGATTGGAATGAGCCTGCTGGGTTTACTGGGCGTTAGCACTGAAT
TCGCCAATGAGAATGAGAAACTCCACAATAAGTTTGTCGAAGGTGCCACC
CAAATGAAAGCCATGTTGTCTCCGACCACAATAGCTCGGGAAAGTGAGCT
CCTCGAGGCGATCGACAAATACATCGCTTCCACTGATATACAGCAGCACG
AAGCTCTCTTTATGAAAGTCATGAGCTTCAAGGATAGGTACTAAGCTTAA
GTCAATAAAACGATTTACACAACATGGAATGAAAAAAAAAAAAAAAAA
MIP32146.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:52:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 19812291..19812882 | 631..40 | 2825 | 98.5 | Minus |
chr2L | 23010047 | chr2L | 19812944..19812981 | 38..1 | 190 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:52:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19813818..19814413 | 635..40 | 2980 | 100 | Minus |
2L | 23513712 | 2L | 19814474..19814512 | 39..1 | 195 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19813818..19814413 | 635..40 | 2980 | 100 | Minus |
2L | 23513712 | 2L | 19814474..19814512 | 39..1 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 10:52:37 has no hits.
MIP32146.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:53:29 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 19812291..19812882 | 40..631 | 98 | <- | Minus |
chr2L | 19812943..19812981 | 1..39 | 97 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-19 17:01:32 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 1..459 | 136..594 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:28:16 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 1..459 | 136..594 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:14:55 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 1..459 | 136..594 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-19 17:01:31 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 25..655 | 1..631 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:28:16 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 21..651 | 1..631 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:55 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13962-RA | 21..651 | 1..631 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:29 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19813822..19814413 | 40..631 | 100 | <- | Minus |
2L | 19814474..19814512 | 1..39 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:29 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19813822..19814413 | 40..631 | 100 | <- | Minus |
2L | 19814474..19814512 | 1..39 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:29 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19813822..19814413 | 40..631 | 100 | <- | Minus |
2L | 19814474..19814512 | 1..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:28:16 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19813822..19814413 | 40..631 | 100 | <- | Minus |
arm_2L | 19814474..19814512 | 1..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:46:54 Download gff for
MIP32146.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19813822..19814413 | 40..631 | 100 | <- | Minus |
2L | 19814474..19814512 | 1..39 | 100 | | Minus |
MIP32146.pep Sequence
Translation from 0 to 593
> MIP32146.pep
MRCMLIVFAIAAVSLSCAAPAKSQNEMLAHFFDYADTLRGIQIHNMMSLT
IKFVQQVVDTVPLEQRGPGTAALQAYANKGKSLKQRGTTGEKYNYIYELQ
QVFEGLNSELSQSAPESQVIGMSLLGLLGVSTEFANENEKLHNKFVEGAT
QMKAMLSPTTIARESELLEAIDKYIASTDIQQHEALFMKVMSFKDRY*
MIP32146.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14430-PA | 196 | GF14430-PA | 1..196 | 1..197 | 552 | 51.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21204-PA | 151 | GG21204-PA | 1..151 | 46..197 | 483 | 64.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13962-PB | 152 | CG13962-PB | 1..152 | 46..197 | 756 | 100 | Plus |
CG13962-PA | 152 | CG13962-PA | 1..152 | 46..197 | 756 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL26172-PA | 197 | GL26172-PA | 1..197 | 1..197 | 500 | 48 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:25:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12661-PA | 197 | GA12661-PA | 1..197 | 1..197 | 500 | 47.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:25:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16983-PA | 192 | GM16983-PA | 9..192 | 14..197 | 881 | 87.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21731-PA | 196 | GD21731-PA | 1..196 | 1..197 | 944 | 88.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:25:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13278-PA | 152 | GE13278-PA | 1..152 | 46..197 | 642 | 79.6 | Plus |
MIP32146.hyp Sequence
Translation from 1 to 593
> MIP32146.hyp
MRCMLIVFAIAAVSLSCAAPAKSQNEMLAHFFDYADTLRGIQIHNMMSLT
IKFVQQVVDTVPLEQRGPGTAALQAYANKGKSLKQRGTTGEKYNYIYELQ
QVFEGLNSELSQSAPESQVIGMSLLGLLGVSTEFANENEKLHNKFVEGAT
QMKAMLSPTTIARESELLEAIDKYIASTDIQQHEALFMKVMSFKDRY*
MIP32146.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:17:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13962-PB | 152 | CG13962-PB | 1..152 | 46..197 | 756 | 100 | Plus |
CG13962-PA | 152 | CG13962-PA | 1..152 | 46..197 | 756 | 100 | Plus |