Clone MIP32846 Report

Search the DGRC for MIP32846

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:328
Well:46
Vector:pOT2
Associated Gene/Transcriptbves-RC
Protein status:MIP32846.pep: gold
Sequenced Size:3548

Clone Sequence Records

MIP32846.complete Sequence

3548 bp assembled on 2011-11-04

GenBank Submission: BT132753.1

> MIP32846.complete
CTCGAACAAAATATGACAAGAAAACATCGGATGAATCGCCGGGCAGGAAA
ATCACGGTTTCCACTGAAAAACTACTGATAGTTATCACATATCCGAAATA
TATGTATTTTCAATCGAAACGAGAACCAAATCCCCGAAAAAACGCGAATC
GGAGTAAATACAAGTTGACTTCTGCTGCAGCTGCCTAAGCGATGCAAAAT
GTGACAGGCGGCAGCAGCAGTAGCCTCATCAAAGGTTAGCTCACCAATAG
CCCCAGCTAAATATTAAACAAATACGGAAATAAGAGTCTAAGGCCATTAA
CTAAACGGCTGACTAAGCTGTAAAATGCAAAGTAATTCAAATTTCAACTA
GCTAGGATATGAACCGCAAGCAAAAAATACATTCAAGACACCAACCGCAA
AGCACAAACATTTTGAAAAGGGCAGCAGCAATAACAAAACAAACCACCAC
CAACAAAGGTTGAGGAAAACCGCGCGTAAGCAACAACAAACGAATTAGGC
GAAGGAGAGAAAGGTGGAAGATAGAAACAAAAGGCAGATTTTTGGCATTC
GCCTAGCGTGGACAACAACCAACCAGTACATCAACCAATCAATTTGGTAA
TTAGGCAAAATACGTGCTGCAAAAAATAGCTCAACGATCAGGCTGAGAGG
AGAGTGACAGACTGAAACGAAGGCAGTTCGCCTGGATCAACGGAATGCCC
AGCACGGCGGGCAGTGCAGCTGGCGTTGGTATGGGCGCCCTGATCAACAG
TGCCGGCAGCAGCGCCAGTAGTGTCATGGGCATTGGCATGGGCAGAGCAG
CTGCTACGGGAGCAGGAGCACCAGGCAGTTCGGGATCTGGAGCAGATGCC
TCCGCCGCCGGCACTTTAATCGCCCAGAGCACGGCGGGAACGAGCGCCGC
CAGCAGTGGAACGATCACCTGGGACAACAATGGAACCCTGCGATCGATCA
ATCCCGGCGATTGGTCCATCGAACAGTGCCTCGGGCCACATCACCTGTAC
TTTCAGCTCGGCTGGGCCTTTCTCTTCCTAGCCTTTTTGGCTCCACACGG
TCCCTACGGCGCCCTGTGGATGCGTGCCATGCTGCTCATTGGCTGCCTGA
TGATGGGCATGCATGGCTACTTGGTGGCCTTTGCACCGGACGTCATCCTG
TGGTCGGGCATGGGACTTTTTGTCAACTTCATCTATCTCGTCGTGGTGCT
ATGCCGGCTGAGGCCTGTGCGATTCGAGCAGGAAATCGAAGCGGTCTACC
TGGCACTTTTCCAGCCGCTGCACGTGACGCGCCACCAGTTCAAGAAGGTG
CTCAACTGCATGAAGGTGATACGTGCCCTGAAGTACCAGGAGGTCTACGC
CCAGGAGAAGGTCACCAAGGTCGACAGCCTGTCGCTGGTGCTGAGCGGCA
AACTGGTGGTGTCGCAGCATCAGCGCGCCCTGCACATTGTGTTTCCCCAT
CAGTTCCTAGACTCGCCAGAATGGTTTGGCGTCTCGACCGATGACTACTT
TCAGGTCTCCATCATGGCCATGGAGGAGTCGCGGGTGCTGATCTGGCATC
GCGACAAGCTCAAATTGTCAATTATGGCCGAGCCCTTCTTGCAGACCGTC
TTCGATCACATTCTGGGCCGGGATGTGGTCAAGAAGCTGATGCAGGTCAC
CCAGGTGAGCGAGTCGATAGCCAGCAATGGCTTCCTGCCCTCTGGTGGAT
ATGCTGAGGATGCGGAGGACAAGCCCATGTTGATACTAAAGAAGAGTGTG
GATGTGGGACACGGACTGACGGCCCTGATCAACCGGCAGCTACAGGCCCT
GCCTAGGATATCGAAGTATTACGATTGCGCTGGAGATCCGAATTCTTGGC
GCCTTGGAAGGATCGATGAAACGGATCACGAAACGGCCGTTTGAAAGGGA
TCCAGATGAAATGTTTAGACTTGTGTTTTTGAGTATTATTAGATGTATAT
TTTAGGCAATACTGAGGAACGAAAGCTGAGGAAATCCGACAGAAAGGAAC
TGCGGAACCTGAGTGCCATGAGTCGGTATACAAAATTATTTATACATACA
TATTTATACTATATGAAAGTAATAACAATTTGGCTATGGGTATTCTTCTA
TTATAGACTCGGGCATTACTTAAGATTTTGCTGTCCTTAAATTCGGTTTG
TGACAATGAAATAAGAATAAGAACGTCACACGATAATATTAAAGCCAAAA
TTGTTCTTAAGTATATTATTCGGCATACGGAAATTGTATTAATTTTATAT
TTTTAAATGAGTAGCCAAATGAAAAAATCGTTTCTGAATTGGATTTATTA
GGGTCACTCGAGAAGAATACGCCTAAGAAAGAGAATGGAAATATACATAC
ATATGTACATATATGTATATGTATATGTATACAGAAAATTATACATTAAT
TAAAACTAGAATAGTTGCAAATTGTATTACGCTAAAACTACGGATTAGAC
GAATGACAAACCAAAACGAGAATAAGAAGGCAAAACAACTGAATGAGATG
TTTAATTATTAAATGGAGAAAGATGTATTTTTTTATTACCCTACATTTAA
GAGATTATAGCCGAATGAAATCGGAGAAAGCCCATAAGCATTATGTGTGA
AATATGCAGAATATAAATAGACGATATGTACATGACTATACATATGTATA
TGTATGGGAAGTTAACGAAAAAATATGTTTGTGGCTCCCCGCTAGATGCA
AAGTTAGAGAACATTCCATCGTTGATTAAACCTTTCAATACCTATAGCAA
TCACTATAACTTTACATACAGTTCCCGCCTAAATTGTCACCTCAATCATC
AACTTCCTGTGAAAGGGTTCGCCCGAAATGCTGGTTAGTCGAATGAAGTG
TTCAGTTAGTTTACCCATAGACCTTTGATAGTCCTTGTTGCTTTTGTATC
TATGTGCCTGAATTCATGCATGTGCATCAATCAAAAAAGTTAAATATTAT
CGAAAAGCCCAAAGGTTAATTTTGTTAAACGATGAACATTAGCTAGGTAT
AACAATAACGCAACCCAACCAGCATAAGTACGAAACGCCTACAAAAACCA
TAGTATATCCAAAATATTAAAAAACTGGACGTATCCGAGAAATAAAAACG
AAGAAACCAACTTAAGAAAACCTAACCCCCGCTCATGGAGGTTTCAATCT
TCTATTCTCGTCGTATTTAAGCCATTTATTTTTTATAAATAGAGCAGGAA
TTTGGTTTCACACCCACAGTATTTTCCCCTAAATTAAAGCGCATTGTATT
GTATCGATCCCAACGTTTGTCTCATGTTAGTTAATGATTAGAAACAACAG
ATCCCCAGATCGACATAGATCGTACACAGAACTACAACCAAACCGAACCG
AACTAAACCAAACCAAAACAAATAGTTCAATGTATTTCGTACCTTTGAGC
ATAATTAAAAATAAAGTAAAATGGAAATGGTATAAAAACAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP32846.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20945936..20947548 1829..3439 8000 99.9 Plus
chrX 22417052 chrX 20925648..20926716 177..1245 5345 100 Plus
chrX 22417052 chrX 20919723..20919899 1..177 885 100 Plus
chrX 22417052 chrX 20940521..20940679 1243..1401 795 100 Plus
chrX 22417052 chrX 20940927..20941081 1502..1656 775 100 Plus
chrX 22417052 chrX 20941196..20941339 1653..1796 720 100 Plus
chrX 22417052 chrX 20940749..20940853 1402..1506 525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:14:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21080779..21082394 1829..3442 8015 99.9 Plus
X 23542271 X 21060491..21061559 177..1245 5345 100 Plus
X 23542271 X 21054566..21054742 1..177 885 100 Plus
X 23542271 X 21075364..21075522 1243..1401 795 100 Plus
X 23542271 X 21075770..21075924 1502..1656 775 100 Plus
X 23542271 X 21076039..21076182 1653..1796 720 100 Plus
X 23542271 X 21075592..21075696 1402..1506 525 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:17:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 21065871..21067486 1829..3442 8025 99.8 Plus
X 23527363 X 21045583..21046651 177..1245 5345 100 Plus
X 23527363 X 21039658..21039834 1..177 885 100 Plus
X 23527363 X 21060456..21060614 1243..1401 795 100 Plus
X 23527363 X 21060862..21061016 1502..1656 775 100 Plus
X 23527363 X 21061131..21061274 1653..1796 720 100 Plus
X 23527363 X 21060684..21060788 1402..1506 525 100 Plus
X 23527363 X 21065138..21065171 1796..1829 170 100 Plus
Blast to na_te.dros performed 2019-03-15 11:14:44
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 3654..3856 2383..2578 152 58 Plus
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 609..728 814..696 140 62.4 Minus
invader3 5484 invader3 INVADER3 5484bp 4989..5051 3057..3120 119 67.2 Plus

MIP32846.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:15:35 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20940522..20940679 1244..1401 100 -> Plus
chrX 20940749..20940851 1402..1504 100 -> Plus
chrX 20940930..20941079 1505..1654 100 -> Plus
chrX 20941198..20941339 1655..1796 100 -> Plus
chrX 20945204..20945236 1797..1829 100 -> Plus
chrX 20919723..20919899 1..177 100 -> Plus
chrX 20925649..20926714 178..1243 100 -> Plus
chrX 20945937..20947548 1830..3439 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-04 08:58:36 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RB 1..1108 695..1802 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:40:12 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 1..1200 695..1894 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:26:56 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 1..1200 695..1894 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-04 08:58:35 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RB 16..1817 1..1802 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:40:12 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 21..3461 1..3439 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:56 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 21..3461 1..3439 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:35 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
X 21054566..21054742 1..177 100 -> Plus
X 21060492..21061557 178..1243 100 -> Plus
X 21075365..21075522 1244..1401 100 -> Plus
X 21075592..21075694 1402..1504 100 -> Plus
X 21075773..21075922 1505..1654 100 -> Plus
X 21076041..21076182 1655..1796 100 -> Plus
X 21080047..21080079 1797..1829 100 -> Plus
X 21080780..21082391 1830..3439 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:35 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
X 21054566..21054742 1..177 100 -> Plus
X 21060492..21061557 178..1243 100 -> Plus
X 21075365..21075522 1244..1401 100 -> Plus
X 21075592..21075694 1402..1504 100 -> Plus
X 21075773..21075922 1505..1654 100 -> Plus
X 21076041..21076182 1655..1796 100 -> Plus
X 21080047..21080079 1797..1829 100 -> Plus
X 21080780..21082391 1830..3439 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:15:35 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
X 21054566..21054742 1..177 100 -> Plus
X 21060492..21061557 178..1243 100 -> Plus
X 21075365..21075522 1244..1401 100 -> Plus
X 21075592..21075694 1402..1504 100 -> Plus
X 21075773..21075922 1505..1654 100 -> Plus
X 21076041..21076182 1655..1796 100 -> Plus
X 21080047..21080079 1797..1829 100 -> Plus
X 21080780..21082391 1830..3439 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:40:12 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20925593..20925769 1..177 100 -> Plus
arm_X 20931519..20932584 178..1243 100 -> Plus
arm_X 20946392..20946549 1244..1401 100 -> Plus
arm_X 20946619..20946721 1402..1504 100 -> Plus
arm_X 20946800..20946949 1505..1654 100 -> Plus
arm_X 20947068..20947209 1655..1796 100 -> Plus
arm_X 20951074..20951106 1797..1829 100 -> Plus
arm_X 20951807..20953418 1830..3439 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:38:17 Download gff for MIP32846.complete
Subject Subject Range Query Range Percent Splice Strand
X 21045584..21046649 178..1243 100 -> Plus
X 21060457..21060614 1244..1401 100 -> Plus
X 21060684..21060786 1402..1504 100 -> Plus
X 21060865..21061014 1505..1654 100 -> Plus
X 21061133..21061274 1655..1796 100 -> Plus
X 21065139..21065171 1797..1829 100 -> Plus
X 21065872..21067483 1830..3439 99   Plus
X 21039658..21039834 1..177 100 -> Plus

MIP32846.pep Sequence

Translation from 694 to 1893

> MIP32846.pep
MPSTAGSAAGVGMGALINSAGSSASSVMGIGMGRAAATGAGAPGSSGSGA
DASAAGTLIAQSTAGTSAASSGTITWDNNGTLRSINPGDWSIEQCLGPHH
LYFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDV
ILWSGMGLFVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFK
KVLNCMKVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVF
PHQFLDSPEWFGVSTDDYFQVSIMAMEESRVLIWHRDKLKLSIMAEPFLQ
TVFDHILGRDVVKKLMQVTQVSESIASNGFLPSGGYAEDAEDKPMLILKK
SVDVGHGLTALINRQLQALPRISKYYDCAGDPNSWRLGRIDETDHETAV*

MIP32846.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21712-PA 424 GF21712-PA 1..381 1..376 1801 91.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19706-PA 400 GG19706-PA 1..369 13..376 1831 94.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11835-PA 433 GH11835-PA 1..385 1..376 1600 82.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
bves-PC 399 CG32513-PC 1..399 1..399 2067 100 Plus
bves-PD 388 CG32513-PD 1..388 1..399 1983 97.2 Plus
bves-PB 414 CG32513-PB 1..367 1..367 1889 100 Plus
bves-PA 414 CG32513-PA 1..367 1..367 1889 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14313-PA 424 GI14313-PA 1..382 1..376 1624 84.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:32:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16399-PA 382 GL16399-PA 1..193 186..376 966 94.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22366-PA 426 GA22366-PA 1..382 1..376 1635 84.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23060-PA 410 GM23060-PA 1..377 1..376 1894 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17511-PA 278 GD17511-PA 51..234 184..367 978 99.5 Plus
Dsim\GD24703-PA 192 GD24703-PA 1..182 1..183 905 96.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19369-PA 419 GJ19369-PA 1..381 1..382 1640 84.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25611-PA 414 GK25611-PA 1..387 1..376 1518 77 Plus
Dwil\GK23556-PA 68 GK23556-PA 1..58 294..351 225 79.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17905-PA 412 GE17905-PA 1..379 1..376 1904 95.8 Plus

MIP32846.hyp Sequence

Translation from 694 to 1893

> MIP32846.hyp
MPSTAGSAAGVGMGALINSAGSSASSVMGIGMGRAAATGAGAPGSSGSGA
DASAAGTLIAQSTAGTSAASSGTITWDNNGTLRSINPGDWSIEQCLGPHH
LYFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDV
ILWSGMGLFVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFK
KVLNCMKVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVF
PHQFLDSPEWFGVSTDDYFQVSIMAMEESRVLIWHRDKLKLSIMAEPFLQ
TVFDHILGRDVVKKLMQVTQVSESIASNGFLPSGGYAEDAEDKPMLILKK
SVDVGHGLTALINRQLQALPRISKYYDCAGDPNSWRLGRIDETDHETAV*

MIP32846.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
bves-PC 399 CG32513-PC 1..399 1..399 2067 100 Plus
bves-PD 388 CG32513-PD 1..388 1..399 1983 97.2 Plus
bves-PB 414 CG32513-PB 1..367 1..367 1889 100 Plus
bves-PA 414 CG32513-PA 1..367 1..367 1889 100 Plus