MIP32906.complete Sequence
996 bp assembled on 2011-09-29
GenBank Submission: BT132649.1
> MIP32906.complete
GAAAATATTGAACAAATCAGTTACAAATATTTAGAAGTTTCGAAACAGAA
CATAAAATACTCCACCTTAAGTACTAACTGTTCAAATGCAAGCATTTTGG
AAATCTATTTAACTGCACTGCCGCTTTTTCATGGCCTTCATGACTGCTGA
CTGCTCTCGTCTTGTCTGTGACTCTTATGGCCCTGTTTTGTATGTTTGTG
GAGCTGCGTTCTGCTACGCATTCCGTTGGTATTCTACCATTAATACTTGT
CTACTTAACGGTAAATTACAGACATTAAACGCACGCACACACGCACACTG
AGTTGCCCATCCTGGCCAAAAAGAGTGTGTGCGTGCCTTTGTATTCGTGT
GGGGAGTGCGGGGTTGGTAAGACACTAGGATGTGCTTATTTGTTGTCAGT
GCGCGTCAAACATTTGAAAACATTTATTTTTGGCCCGTACGAATGCTTCA
ATACTCGTAAGGCCTGCCAGTTGCCAGTTTATTTTTTGCCCATCCACTGA
AACAGAAATGTATCCTGACAAATGGATCTCAATGGGAGTCCTCTGCTGTC
GCCATTCCATTCGTTATATATGAAAGCCACTGTCAAGGGAAATATCATAA
ATATGTAGAAGAGGAGCGAGAAAGTTATCACGAGATATTTAGAAGCAAAG
AAAGAATACAAATTAAACGATAGCTTCCATTCGGAAATTCCCCAAAAGTG
CTGGGCAGACCTTTTTTTTTTTTGATCCAACTCGACTTTGCTTTTCTGCG
GGCAAGGACGTAGAATCAACAAAAGTAAAACAATACCAAAAATCAAACAC
ACAAAACGACTGAAAGGTGATGCACGTTTCCATCCTCAGGGTCCTGGGCA
GGACCGAAATCGGGATTTGGGTGAAGGGAACGAAAGGAAAGAAGGCGGGC
GGCAGGACTTGTAAAATACTTTTGTGTAACTTTGGCTGAAAACTTTATTT
TGTGTATTATATATCCTGTTAACAATATAAAAAAAAAAAAAAAAAA
MIP32906.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:10:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 12301693..12302231 | 95..648 | 2360 | 95.5 | Plus |
chr3L | 24539361 | chr3L | 12302300..12302628 | 649..978 | 1570 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 12301487..12301599 | 1..113 | 565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12311011..12311564 | 95..648 | 2635 | 98.4 | Plus |
3L | 28110227 | 3L | 12311633..12311962 | 649..979 | 1560 | 98.8 | Plus |
3L | 28110227 | 3L | 12310805..12310917 | 1..113 | 520 | 97.3 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:14:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 12304111..12304664 | 95..648 | 2635 | 98.3 | Plus |
3L | 28103327 | 3L | 12304733..12305062 | 649..979 | 1570 | 98.7 | Plus |
3L | 28103327 | 3L | 12303905..12304017 | 1..113 | 520 | 97.3 | Plus |
Blast to na_te.dros performed on 2019-03-15 11:10:22 has no hits.
MIP32906.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:11:24 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 12301487..12301599 | 1..113 | 100 | -> | Plus |
chr3L | 12301712..12302163 | 114..565 | 99 | == | Plus |
chr3L | 12302169..12302231 | 586..648 | 98 | -> | Plus |
chr3L | 12302300..12302628 | 649..978 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:38:23 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44355-RA | 1..171 | 131..301 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:25:10 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44355-RA | 1..171 | 131..301 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:38:23 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44355-RA | 1..977 | 1..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:10 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44355-RA | 1..977 | 1..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12310805..12310917 | 1..113 | 97 | -> | Plus |
3L | 12311030..12311564 | 114..648 | 99 | -> | Plus |
3L | 12311633..12311961 | 649..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12310805..12310917 | 1..113 | 97 | -> | Plus |
3L | 12311030..12311564 | 114..648 | 99 | -> | Plus |
3L | 12311633..12311961 | 649..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12310805..12310917 | 1..113 | 97 | -> | Plus |
3L | 12311030..12311564 | 114..648 | 99 | -> | Plus |
3L | 12311633..12311961 | 649..978 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:38:23 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12303905..12304017 | 1..113 | 97 | -> | Plus |
arm_3L | 12304130..12304664 | 114..648 | 99 | -> | Plus |
arm_3L | 12304733..12305061 | 649..978 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:36:03 Download gff for
MIP32906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12304130..12304664 | 114..648 | 99 | -> | Plus |
3L | 12304733..12305061 | 649..978 | 98 | | Plus |
3L | 12303905..12304017 | 1..113 | 97 | -> | Plus |
MIP32906.hyp Sequence
Translation from 130 to 300
> MIP32906.hyp
MAFMTADCSRLVCDSYGPVLYVCGAAFCYAFRWYSTINTCLLNGKLQTLN
ARTHAH*
MIP32906.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44355-PA | 56 | CG44355-PA | 1..56 | 1..56 | 313 | 100 | Plus |
MIP32906.pep Sequence
Translation from 130 to 300
> MIP32906.pep
MAFMTADCSRLVCDSYGPVLYVCGAAFCYAFRWYSTINTCLLNGKLQTLN
ARTHAH*
MIP32906.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44355-PA | 56 | CG44355-PA | 1..56 | 1..56 | 313 | 100 | Plus |