Clone MIP32906 Report

Search the DGRC for MIP32906

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:329
Well:6
Vector:pOTB7
Associated Gene/TranscriptCG44355-RA
Protein status:MIP32906.pep: gold
Sequenced Size:996

Clone Sequence Records

MIP32906.complete Sequence

996 bp assembled on 2011-09-29

GenBank Submission: BT132649.1

> MIP32906.complete
GAAAATATTGAACAAATCAGTTACAAATATTTAGAAGTTTCGAAACAGAA
CATAAAATACTCCACCTTAAGTACTAACTGTTCAAATGCAAGCATTTTGG
AAATCTATTTAACTGCACTGCCGCTTTTTCATGGCCTTCATGACTGCTGA
CTGCTCTCGTCTTGTCTGTGACTCTTATGGCCCTGTTTTGTATGTTTGTG
GAGCTGCGTTCTGCTACGCATTCCGTTGGTATTCTACCATTAATACTTGT
CTACTTAACGGTAAATTACAGACATTAAACGCACGCACACACGCACACTG
AGTTGCCCATCCTGGCCAAAAAGAGTGTGTGCGTGCCTTTGTATTCGTGT
GGGGAGTGCGGGGTTGGTAAGACACTAGGATGTGCTTATTTGTTGTCAGT
GCGCGTCAAACATTTGAAAACATTTATTTTTGGCCCGTACGAATGCTTCA
ATACTCGTAAGGCCTGCCAGTTGCCAGTTTATTTTTTGCCCATCCACTGA
AACAGAAATGTATCCTGACAAATGGATCTCAATGGGAGTCCTCTGCTGTC
GCCATTCCATTCGTTATATATGAAAGCCACTGTCAAGGGAAATATCATAA
ATATGTAGAAGAGGAGCGAGAAAGTTATCACGAGATATTTAGAAGCAAAG
AAAGAATACAAATTAAACGATAGCTTCCATTCGGAAATTCCCCAAAAGTG
CTGGGCAGACCTTTTTTTTTTTTGATCCAACTCGACTTTGCTTTTCTGCG
GGCAAGGACGTAGAATCAACAAAAGTAAAACAATACCAAAAATCAAACAC
ACAAAACGACTGAAAGGTGATGCACGTTTCCATCCTCAGGGTCCTGGGCA
GGACCGAAATCGGGATTTGGGTGAAGGGAACGAAAGGAAAGAAGGCGGGC
GGCAGGACTTGTAAAATACTTTTGTGTAACTTTGGCTGAAAACTTTATTT
TGTGTATTATATATCCTGTTAACAATATAAAAAAAAAAAAAAAAAA

MIP32906.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12301693..12302231 95..648 2360 95.5 Plus
chr3L 24539361 chr3L 12302300..12302628 649..978 1570 99.1 Plus
chr3L 24539361 chr3L 12301487..12301599 1..113 565 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12311011..12311564 95..648 2635 98.4 Plus
3L 28110227 3L 12311633..12311962 649..979 1560 98.8 Plus
3L 28110227 3L 12310805..12310917 1..113 520 97.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 12304111..12304664 95..648 2635 98.3 Plus
3L 28103327 3L 12304733..12305062 649..979 1570 98.7 Plus
3L 28103327 3L 12303905..12304017 1..113 520 97.3 Plus
Blast to na_te.dros performed on 2019-03-15 11:10:22 has no hits.

MIP32906.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:11:24 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12301487..12301599 1..113 100 -> Plus
chr3L 12301712..12302163 114..565 99 == Plus
chr3L 12302169..12302231 586..648 98 -> Plus
chr3L 12302300..12302628 649..978 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:38:23 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
CG44355-RA 1..171 131..301 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:25:10 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
CG44355-RA 1..171 131..301 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:38:23 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
CG44355-RA 1..977 1..978 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:10 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
CG44355-RA 1..977 1..978 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12310805..12310917 1..113 97 -> Plus
3L 12311030..12311564 114..648 99 -> Plus
3L 12311633..12311961 649..978 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12310805..12310917 1..113 97 -> Plus
3L 12311030..12311564 114..648 99 -> Plus
3L 12311633..12311961 649..978 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:11:24 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12310805..12310917 1..113 97 -> Plus
3L 12311030..12311564 114..648 99 -> Plus
3L 12311633..12311961 649..978 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:38:23 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12303905..12304017 1..113 97 -> Plus
arm_3L 12304130..12304664 114..648 99 -> Plus
arm_3L 12304733..12305061 649..978 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:36:03 Download gff for MIP32906.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12304130..12304664 114..648 99 -> Plus
3L 12304733..12305061 649..978 98   Plus
3L 12303905..12304017 1..113 97 -> Plus

MIP32906.hyp Sequence

Translation from 130 to 300

> MIP32906.hyp
MAFMTADCSRLVCDSYGPVLYVCGAAFCYAFRWYSTINTCLLNGKLQTLN
ARTHAH*

MIP32906.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG44355-PA 56 CG44355-PA 1..56 1..56 313 100 Plus

MIP32906.pep Sequence

Translation from 130 to 300

> MIP32906.pep
MAFMTADCSRLVCDSYGPVLYVCGAAFCYAFRWYSTINTCLLNGKLQTLN
ARTHAH*

MIP32906.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG44355-PA 56 CG44355-PA 1..56 1..56 313 100 Plus