Clone MIP34364 Report

Search the DGRC for MIP34364

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:343
Well:64
Vector:pOTB7
Associated Gene/TranscriptCG1724-RA
Protein status:MIP34364.pep: gold
Sequenced Size:731

Clone Sequence Records

MIP34364.complete Sequence

731 bp assembled on 2012-10-19

GenBank Submission: BT149869.1

> MIP34364.complete
ATCGCACGTGCGAAAAGTCGAGCGTCGTAGCGTTACAAATTCCGTCTAGA
GTTTTCAATTTCGAAATATTTGACTGAAGGAATATCGAAATGGAGGAGTA
TTCGCGCGAACCGTGTCCTTTTCGCATCGTGGACGATTGTGGCGGGGCTT
TCACGATGGGCTGCTTCGGAGGCGGTCTCTTCCAGGGACTAAAGGGATTC
CGGAATGCACCTCAAGGGCTCAAAAGACGGTTCGCCGGCGGATTGGCGGC
CGTAAAGTCCAGATCGCCAACCATTGGCGGAAATTTCGCCGCATGGGGCT
GCGTCTTCAGCATCGTGGATTGCAGCCTGGTGCATCTGCGCAAGAAGGAG
GATCCGTGGAACTCGATCATGAGCGGAGCGATCGCCGGTGGGATTCTGTC
CTCCCGAAACGGAGTAGCCGCCATGTTCGGAAGCGCCATCATTGGCGGAG
TTCTGCTCTCAATGATCGAGGGCGTGGGCATTCTGTTCACCCGCATCTCC
GCCGAGCAGTTTCGCAATTCTGATCCGCAGAACGATCTAGGCAGAGCAGG
CGCGTTTGCTTCTGGATCCGGAATGGGATCAGGCGATATTAATTCATCAC
CGGGCTTTGAGTTCCCCGTAGTGCAGCAGGCCAACGCAACAAGCTAAATT
TCTGTTCTCATTCTGCCCGTCAAGCCGGAACCTTAATGAATAATTATGAT
TTCTTTCGTTGTTTAAAAAAAAAAAAAAAAA

MIP34364.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:02:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 21067745..21068458 714..1 3570 100 Minus
chr2L 23010047 chr2L 15483548..15483939 90..481 640 77.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:02:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21202587..21203301 715..1 3575 100 Minus
2L 23513712 2L 15484837..15485228 90..481 655 77.8 Plus
Blast to na_te.dros performed on 2019-03-15 14:02:45 has no hits.

MIP34364.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:03:38 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 21067745..21068458 1..714 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-10-19 15:51:10 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 1..558 90..647 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:16:09 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 1..558 90..647 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:48:08 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 1..558 90..647 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 15:51:10 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 41..754 1..714 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:16:09 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 41..754 1..714 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:48:08 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
CG1724-RA 41..754 1..714 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:38 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
X 21202588..21203301 1..714 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:38 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
X 21202588..21203301 1..714 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:03:38 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
X 21202588..21203301 1..714 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:16:09 Download gff for MIP34364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21073615..21074328 1..714 100   Minus

MIP34364.hyp Sequence

Translation from 89 to 646

> MIP34364.hyp
MEEYSREPCPFRIVDDCGGAFTMGCFGGGLFQGLKGFRNAPQGLKRRFAG
GLAAVKSRSPTIGGNFAAWGCVFSIVDCSLVHLRKKEDPWNSIMSGAIAG
GILSSRNGVAAMFGSAIIGGVLLSMIEGVGILFTRISAEQFRNSDPQNDL
GRAGAFASGSGMGSGDINSSPGFEFPVVQQANATS*

MIP34364.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG1724-PA 185 CG1724-PA 1..185 1..185 967 100 Plus
Tim17b2-PC 176 CG15257-PC 1..176 1..185 686 73 Plus
Tim17b2-PA 176 CG15257-PA 1..176 1..185 686 73 Plus
Tim17b-PB 173 CG40451-PB 1..167 1..160 606 68.3 Plus
Tim17b-PA 173 CG40451-PA 1..167 1..160 606 68.3 Plus

MIP34364.pep Sequence

Translation from 89 to 646

> MIP34364.pep
MEEYSREPCPFRIVDDCGGAFTMGCFGGGLFQGLKGFRNAPQGLKRRFAG
GLAAVKSRSPTIGGNFAAWGCVFSIVDCSLVHLRKKEDPWNSIMSGAIAG
GILSSRNGVAAMFGSAIIGGVLLSMIEGVGILFTRISAEQFRNSDPQNDL
GRAGAFASGSGMGSGDINSSPGFEFPVVQQANATS*

MIP34364.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15384-PA 181 GF15384-PA 1..181 1..185 705 75.7 Plus
Dana\GF20543-PA 171 GF20543-PA 1..149 1..149 604 71.1 Plus
Dana\GF18933-PA 184 GF18933-PA 1..146 1..146 506 59.6 Plus
Dana\GF16065-PA 224 GF16065-PA 2..155 3..148 443 55.8 Plus
Dana\GF15488-PA 206 GF15488-PA 2..165 3..164 378 45.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17552-PA 186 GG17552-PA 1..186 1..185 781 84.4 Plus
Dere\GG25162-PA 177 GG25162-PA 1..177 1..185 669 70.8 Plus
Dere\GG13145-PA 173 GG13145-PA 1..149 1..149 600 71.8 Plus
Dere\GG12726-PA 175 GG12726-PA 1..146 1..146 542 64.4 Plus
Dere\GG17140-PA 222 GG17140-PA 2..137 3..138 449 59.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19590-PA 172 GH19590-PA 1..149 1..149 609 73.2 Plus
Dgri\GH13757-PA 172 GH13757-PA 1..172 1..168 592 64 Plus
Dgri\GH17768-PA 185 GH17768-PA 1..143 1..143 524 65.7 Plus
Dgri\GH22709-PA 232 GH22709-PA 1..151 1..149 461 55.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG1724-PA 185 CG1724-PA 1..185 1..185 967 100 Plus
Tim17b2-PC 176 CG15257-PC 1..176 1..185 686 73 Plus
Tim17b2-PA 176 CG15257-PA 1..176 1..185 686 73 Plus
Tim17b-PB 173 CG40451-PB 1..167 1..160 606 68.3 Plus
Tim17b-PA 173 CG40451-PA 1..167 1..160 606 68.3 Plus
Tim17b1-PA 179 CG1158-PA 1..146 1..146 522 63 Plus
Tim17a1-PB 222 CG10090-PB 2..137 3..138 452 60.3 Plus
Tim17a1-PA 222 CG10090-PA 2..137 3..138 452 60.3 Plus
Tim17a2-PA 224 CG14666-PA 2..137 3..138 422 56.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17897-PA 177 GI17897-PA 1..154 1..154 610 74 Plus
Dmoj\GI23631-PA 172 GI23631-PA 1..149 1..149 604 72.5 Plus
Dmoj\GI22546-PA 217 GI22546-PA 1..143 1..143 518 64.3 Plus
Dmoj\Tes127-PA 223 GI10214-PA 1..147 1..147 442 53.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12286-PA 173 GL12286-PA 1..149 1..149 608 72.5 Plus
Dper\GL26428-PA 171 GL26428-PA 1..146 1..146 572 71.9 Plus
Dper\GL14996-PA 191 GL14996-PA 2..139 3..140 434 56.5 Plus
Dper\GL22194-PA 202 GL22194-PA 2..151 3..152 413 50.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26255-PA 173 GA26255-PA 1..149 1..149 608 72.5 Plus
Dpse\GA28858-PA 171 GA28858-PA 1..146 1..146 575 73.3 Plus
Dpse\GA26353-PA 172 GA26353-PA 3..140 6..143 464 58.7 Plus
Dpse\GA22481-PA 191 GA22481-PA 2..145 3..146 436 54.9 Plus
Dpse\GA13158-PA 202 GA13158-PA 2..151 3..152 415 51.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22636-PA 185 GM22636-PA 1..184 1..184 909 95.1 Plus
Dsec\GM16089-PA 478 GM16089-PA 1..174 1..182 684 73.1 Plus
Dsec\GM23215-PA 173 GM23215-PA 1..146 1..146 602 74 Plus
Dsec\GM10800-PA 179 GM10800-PA 1..177 1..170 529 55.9 Plus
Dsec\GM26023-PA 222 GM26023-PA 2..137 3..138 452 60.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24434-PA 185 GD24434-PA 1..185 1..185 913 95.7 Plus
Dsim\GD24009-PA 420 GD24009-PA 1..174 1..182 678 72.5 Plus
Dsim\GD19775-PA 179 GD19775-PA 1..177 1..170 526 55.4 Plus
Dsim\GD11957-PA 119 GD11957-PA 1..113 1..113 459 69.9 Plus
Dsim\GD20580-PA 222 GD20580-PA 2..137 3..138 452 60.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17402-PA 177 GJ17402-PA 1..149 1..149 606 75.2 Plus
Dvir\GJ11192-PA 172 GJ11192-PA 1..149 1..149 602 71.1 Plus
Dvir\GJ10150-PA 189 GJ10150-PA 1..142 1..143 499 65 Plus
Dvir\GJ11015-PA 224 GJ11015-PA 1..140 1..140 447 56.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18250-PA 179 GK18250-PA 1..162 1..166 646 74.1 Plus
Dwil\GK12238-PA 173 GK12238-PA 1..149 1..149 610 73.8 Plus
Dwil\GK12968-PA 180 GK12968-PA 1..142 1..142 517 64.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15312-PA 185 GE15312-PA 1..185 1..185 893 93.5 Plus
Dyak\GE21001-PA 177 GE21001-PA 1..177 1..185 678 71.9 Plus
Dyak\GE25459-PA 179 GE25459-PA 1..173 1..171 541 59.5 Plus
Dyak\GE24530-PA 222 GE24530-PA 2..137 3..138 444 59.6 Plus